Protein–RNA interactions for Protein: Q7L0R7

RNF44, RING finger protein 44, humanhuman

Predictions only

Length 432 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF44Q7L0R7 DRD5P2-201ENST00000421395 2012 ntBASIC24.17■■□□□ 1.46
RNF44Q7L0R7 G6PC3-201ENST00000269097 1533 ntAPPRIS P1 TSL 1 (best) BASIC24.16■■□□□ 1.46
RNF44Q7L0R7 FAH-213ENST00000561421 1549 ntAPPRIS P1 TSL 1 (best) BASIC24.16■■□□□ 1.46
RNF44Q7L0R7 MXRA7-203ENST00000449428 1881 ntAPPRIS ALT2 TSL 1 (best) BASIC24.16■■□□□ 1.46
RNF44Q7L0R7 SYT12-205ENST00000527043 1661 ntAPPRIS P1 TSL 1 (best) BASIC24.16■■□□□ 1.46
RNF44Q7L0R7 C9orf50-201ENST00000372478 1620 ntAPPRIS P2 TSL 2 BASIC24.16■■□□□ 1.46
RNF44Q7L0R7 TMEM187-201ENST00000369982 1880 ntAPPRIS P1 TSL 1 (best) BASIC24.15■■□□□ 1.46
RNF44Q7L0R7 DDAH2-212ENST00000375789 1688 ntAPPRIS P1 TSL 2 BASIC24.15■■□□□ 1.46
RNF44Q7L0R7 DDAH2-213ENST00000375792 1688 ntAPPRIS P1 TSL 1 (best) BASIC24.15■■□□□ 1.46
RNF44Q7L0R7 MEX3D-201ENST00000402693 2850 ntAPPRIS P2 TSL 1 (best) BASIC24.15■■□□□ 1.46
RNF44Q7L0R7 GPR25-201ENST00000304244 1224 ntAPPRIS P1 BASIC24.15■■□□□ 1.46
RNF44Q7L0R7 CHST11-203ENST00000547956 936 ntTSL 2 BASIC24.15■■□□□ 1.46
RNF44Q7L0R7 C16orf74-204ENST00000602719 1002 ntAPPRIS ALT2 TSL 3 BASIC24.15■■□□□ 1.46
RNF44Q7L0R7 LACTBL1-202ENST00000618559 1500 ntAPPRIS ALT2 TSL 5 BASIC24.15■■□□□ 1.46
RNF44Q7L0R7 DCUN1D5-201ENST00000260247 1337 ntAPPRIS P1 TSL 1 (best) BASIC24.14■■□□□ 1.46
RNF44Q7L0R7 U2AF1-201ENST00000291552 962 ntAPPRIS P3 TSL 1 (best) BASIC24.14■■□□□ 1.45
RNF44Q7L0R7 VEGFA-202ENST00000324450 954 ntTSL 1 (best) BASIC24.14■■□□□ 1.45
RNF44Q7L0R7 VEGFA-203ENST00000372055 1286 ntTSL 1 (best) BASIC24.14■■□□□ 1.45
RNF44Q7L0R7 BOK-AS1-201ENST00000434306 643 ntTSL 1 (best) BASIC24.14■■□□□ 1.45
RNF44Q7L0R7 VEGFA-213ENST00000482630 1146 ntTSL 1 (best) BASIC24.14■■□□□ 1.45
RNF44Q7L0R7 VEGFA-227ENST00000615393 984 ntTSL 1 (best) BASIC24.14■■□□□ 1.45
RNF44Q7L0R7 VEGFA-228ENST00000617771 1116 ntTSL 1 (best) BASIC24.14■■□□□ 1.45
RNF44Q7L0R7 U2AF1L5-202ENST00000619610 813 ntAPPRIS ALT2 TSL 1 (best) BASIC24.14■■□□□ 1.45
RNF44Q7L0R7 VEGFA-229ENST00000621747 1116 ntAPPRIS ALT2 TSL 1 (best) BASIC24.14■■□□□ 1.45
RNF44Q7L0R7 VEGFA-230ENST00000640482 1065 ntAPPRIS ALT2 TSL 1 (best) BASIC24.14■■□□□ 1.45
RNF44Q7L0R7 VEGFA-232ENST00000640653 1170 ntAPPRIS ALT2 TSL 1 (best) BASIC24.14■■□□□ 1.45
RNF44Q7L0R7 HTR6-201ENST00000289753 1984 ntAPPRIS P1 TSL 1 (best) BASIC24.14■■□□□ 1.45
RNF44Q7L0R7 IL17D-201ENST00000304920 1861 ntAPPRIS P1 TSL 1 (best) BASIC24.13■■□□□ 1.45
RNF44Q7L0R7 THAP11-201ENST00000303596 2114 ntAPPRIS P1 BASIC24.13■■□□□ 1.45
RNF44Q7L0R7 RRAGC-201ENST00000373001 2732 ntAPPRIS P1 TSL 1 (best) BASIC24.13■■□□□ 1.45
RNF44Q7L0R7 SPATA33-209ENST00000579310 1490 ntAPPRIS ALT2 TSL 2 BASIC24.13■■□□□ 1.45
RNF44Q7L0R7 DPY19L1-209ENST00000638088 5075 ntAPPRIS ALT2 TSL 5 BASIC24.12■■□□□ 1.45
RNF44Q7L0R7 CLDND1-226ENST00000513287 999 ntAPPRIS P1 TSL 2 BASIC24.12■■□□□ 1.45
RNF44Q7L0R7 PLEKHF2-202ENST00000519516 1144 ntAPPRIS P1 TSL 3 BASIC24.12■■□□□ 1.45
RNF44Q7L0R7 PCK2-202ENST00000396973 1830 ntTSL 1 (best) BASIC24.12■■□□□ 1.45
RNF44Q7L0R7 KANSL1L-207ENST00000452086 2334 ntTSL 1 (best) BASIC24.11■■□□□ 1.45
RNF44Q7L0R7 NREP-216ENST00000508870 540 ntAPPRIS P1 TSL 4 BASIC24.11■■□□□ 1.45
RNF44Q7L0R7 AC016595.1-201ENST00000559410 383 ntTSL 3 BASIC24.11■■□□□ 1.45
RNF44Q7L0R7 CRNDE-206ENST00000559432 587 ntTSL 3 BASIC24.11■■□□□ 1.45
RNF44Q7L0R7 COPZ2-210ENST00000621465 895 ntAPPRIS P1 TSL 1 (best) BASIC24.11■■□□□ 1.45
RNF44Q7L0R7 MIR219A2-201ENST00000608502 1504 ntBASIC24.1■■□□□ 1.45
RNF44Q7L0R7 MFSD12-202ENST00000389395 2039 ntAPPRIS ALT2 TSL 1 (best) BASIC24.1■■□□□ 1.45
RNF44Q7L0R7 LSM6-202ENST00000502781 1352 ntAPPRIS P1 TSL 1 (best) BASIC24.1■■□□□ 1.45
RNF44Q7L0R7 AC018358.1-201ENST00000631079 1402 ntBASIC24.1■■□□□ 1.45
RNF44Q7L0R7 RUNX2-211ENST00000625924 1458 ntAPPRIS ALT2 TSL 1 (best) BASIC24.09■■□□□ 1.45
RNF44Q7L0R7 PDF-201ENST00000288022 1158 ntAPPRIS P1 TSL 1 (best) BASIC24.09■■□□□ 1.45
RNF44Q7L0R7 NSMCE4A-201ENST00000369017 1224 ntTSL 1 (best) BASIC24.09■■□□□ 1.45
RNF44Q7L0R7 R3HDM4-208ENST00000626716 138 ntTSL 5 BASIC24.09■■□□□ 1.45
RNF44Q7L0R7 ZDHHC23-206ENST00000498275 2055 ntAPPRIS ALT2 TSL 2 BASIC24.08■■□□□ 1.45
RNF44Q7L0R7 SRP68-213ENST00000629930 165 ntTSL 5 BASIC24.08■■□□□ 1.45
RNF44Q7L0R7 GSR-205ENST00000541648 1410 ntTSL 1 (best) BASIC24.08■■□□□ 1.44
RNF44Q7L0R7 AC078883.1-202ENST00000450443 1397 ntTSL 3 BASIC24.07■■□□□ 1.44
RNF44Q7L0R7 CDH23-208ENST00000461841 2000 ntTSL 5 BASIC24.07■■□□□ 1.44
RNF44Q7L0R7 LSM7-201ENST00000252622 529 ntAPPRIS P1 TSL 1 (best) BASIC24.07■■□□□ 1.44
RNF44Q7L0R7 AL121987.2-201ENST00000418602 1578 ntTSL 2 BASIC24.07■■□□□ 1.44
RNF44Q7L0R7 CDC34-201ENST00000215574 1471 ntAPPRIS P1 TSL 1 (best) BASIC24.07■■□□□ 1.44
RNF44Q7L0R7 SNX24-201ENST00000261369 2158 ntAPPRIS P1 TSL 1 (best) BASIC24.06■■□□□ 1.44
RNF44Q7L0R7 BAX-202ENST00000345358 793 ntAPPRIS P1 TSL 1 (best) BASIC24.06■■□□□ 1.44
RNF44Q7L0R7 LINC01918-201ENST00000436841 797 ntTSL 2 BASIC24.06■■□□□ 1.44
RNF44Q7L0R7 EXOC3L4-201ENST00000380069 2293 ntAPPRIS P1 TSL 1 (best) BASIC24.05■■□□□ 1.44
RNF44Q7L0R7 HIST2H3C-201ENST00000369158 1656 ntAPPRIS P1 BASIC24.05■■□□□ 1.44
RNF44Q7L0R7 HIST2H3A-201ENST00000403683 1656 ntAPPRIS P1 BASIC24.05■■□□□ 1.44
RNF44Q7L0R7 HOMER2-202ENST00000450735 1950 ntAPPRIS ALT2 TSL 1 (best) BASIC24.05■■□□□ 1.44
RNF44Q7L0R7 CRELD2-203ENST00000404488 1577 ntAPPRIS ALT2 TSL 1 (best) BASIC24.04■■□□□ 1.44
RNF44Q7L0R7 FAM168B-201ENST00000389915 944 ntAPPRIS P1 TSL 3 BASIC24.04■■□□□ 1.44
RNF44Q7L0R7 AQP1-203ENST00000409899 1009 ntTSL 1 (best) BASIC24.04■■□□□ 1.44
RNF44Q7L0R7 EPB41L4A-AS2-201ENST00000623705 1396 ntBASIC24.03■■□□□ 1.44
RNF44Q7L0R7 LACTB-201ENST00000261893 1972 ntAPPRIS P1 TSL 1 (best) BASIC24.03■■□□□ 1.44
RNF44Q7L0R7 CCDC61-204ENST00000595358 1817 ntAPPRIS P2 TSL 5 BASIC24.03■■□□□ 1.44
RNF44Q7L0R7 COL13A1-213ENST00000520267 2276 ntAPPRIS ALT2 TSL 5 BASIC24.03■■□□□ 1.44
RNF44Q7L0R7 SV2B-203ENST00000545111 2099 ntTSL 2 BASIC24.03■■□□□ 1.44
RNF44Q7L0R7 TAF10-201ENST00000299424 1215 ntAPPRIS P1 TSL 1 (best) BASIC24.03■■□□□ 1.44
RNF44Q7L0R7 WSB2-201ENST00000315436 2646 ntAPPRIS P1 TSL 1 (best) BASIC24.03■■□□□ 1.44
RNF44Q7L0R7 ACTR3B-201ENST00000256001 2216 ntAPPRIS P1 TSL 1 (best) BASIC24.03■■□□□ 1.44
RNF44Q7L0R7 C11orf80-218ENST00000540737 1786 ntAPPRIS ALT2 TSL 2 BASIC24.02■■□□□ 1.44
RNF44Q7L0R7 HSD17B12-202ENST00000395700 994 ntTSL 1 (best) BASIC24.02■■□□□ 1.44
RNF44Q7L0R7 BANF1-208ENST00000533166 1135 ntAPPRIS P1 TSL 2 BASIC24.02■■□□□ 1.44
RNF44Q7L0R7 RPARP-AS1-205ENST00000596045 431 ntTSL 3 BASIC24.02■■□□□ 1.44
RNF44Q7L0R7 BCL7B-202ENST00000411832 1458 ntTSL 2 BASIC24.01■■□□□ 1.43
RNF44Q7L0R7 FAM120AOS-202ENST00000423591 1800 ntAPPRIS ALT2 TSL 1 (best) BASIC24.01■■□□□ 1.43
RNF44Q7L0R7 GAL3ST3-203ENST00000527878 1599 ntAPPRIS P1 TSL 1 (best) BASIC24.01■■□□□ 1.43
RNF44Q7L0R7 TPT1-202ENST00000379055 948 ntTSL 2 BASIC24.01■■□□□ 1.43
RNF44Q7L0R7 ACTG1-210ENST00000575842 2256 ntAPPRIS P1 TSL 1 (best) BASIC24.01■■□□□ 1.43
RNF44Q7L0R7 NTN3-201ENST00000293973 1986 ntAPPRIS P1 TSL 1 (best) BASIC24.01■■□□□ 1.43
RNF44Q7L0R7 NFYB-205ENST00000551727 1727 ntAPPRIS P1 TSL 3 BASIC24.01■■□□□ 1.43
RNF44Q7L0R7 MRPL51-201ENST00000229238 1234 ntAPPRIS P1 TSL 1 (best) BASIC24■■□□□ 1.43
RNF44Q7L0R7 PLSCR3-209ENST00000574401 2032 ntAPPRIS P1 TSL 1 (best) BASIC24■■□□□ 1.43
RNF44Q7L0R7 CMPK2-203ENST00000458098 1224 ntTSL 1 (best) BASIC23.99■■□□□ 1.43
RNF44Q7L0R7 ATOH7-201ENST00000373673 1480 ntAPPRIS P1 BASIC23.99■■□□□ 1.43
RNF44Q7L0R7 DHRS13-203ENST00000426464 1569 ntTSL 2 BASIC23.99■■□□□ 1.43
RNF44Q7L0R7 DLG3-203ENST00000374360 5905 ntAPPRIS P2 TSL 1 (best) BASIC23.98■■□□□ 1.43
RNF44Q7L0R7 EIF5A-208ENST00000573542 1089 ntAPPRIS P1 TSL 2 BASIC23.98■■□□□ 1.43
RNF44Q7L0R7 FAM117A-201ENST00000240364 2365 ntAPPRIS P2 TSL 1 (best) BASIC23.97■■□□□ 1.43
RNF44Q7L0R7 CBWD5-202ENST00000377384 1347 ntTSL 1 (best) BASIC23.97■■□□□ 1.43
RNF44Q7L0R7 MDFIC-203ENST00000423503 474 ntTSL 1 (best) BASIC23.97■■□□□ 1.43
RNF44Q7L0R7 AC010907.1-201ENST00000441632 807 ntTSL 3 BASIC23.97■■□□□ 1.43
RNF44Q7L0R7 KIF13A-207ENST00000502704 1330 ntTSL 1 (best) BASIC23.97■■□□□ 1.43
RNF44Q7L0R7 ABHD17C-202ENST00000558464 1976 ntTSL 1 (best) BASIC23.97■■□□□ 1.43
RNF44Q7L0R7 SHF-206ENST00000560471 2499 ntTSL 5 BASIC23.97■■□□□ 1.43
RNF44Q7L0R7 GGA1-204ENST00000381756 2107 ntTSL 1 (best) BASIC23.96■■□□□ 1.43
Retrieved 100 of 98,524 protein–RNA pairs in 11.4 ms