Protein–RNA interactions for Protein: Q6ZS62

COLCA1, Colorectal cancer-associated protein 1, humanhuman

Predictions only

Length 124 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COLCA1Q6ZS62 U2AF1-203ENST00000398137 1019 ntTSL 1 (best) BASIC21.78■■□□□ 1.08
COLCA1Q6ZS62 U2AF1L5-212ENST00000639996 1019 ntTSL 1 (best) BASIC21.78■■□□□ 1.08
COLCA1Q6ZS62 RTN2-202ENST00000344680 2063 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
COLCA1Q6ZS62 FBXL8-206ENST00000519917 1460 ntAPPRIS P1 TSL 5 BASIC21.77■■□□□ 1.08
COLCA1Q6ZS62 CD6-206ENST00000452451 1782 ntAPPRIS ALT2 TSL 1 (best) BASIC21.77■■□□□ 1.08
COLCA1Q6ZS62 TSPAN3-203ENST00000424443 1530 ntTSL 2 BASIC21.77■■□□□ 1.08
COLCA1Q6ZS62 C5orf66-AS1-201ENST00000507035 843 ntTSL 2 BASIC21.77■■□□□ 1.08
COLCA1Q6ZS62 RPS2-210ENST00000530225 765 ntTSL 2 BASIC21.77■■□□□ 1.08
COLCA1Q6ZS62 C9orf40-201ENST00000376854 2327 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.07
COLCA1Q6ZS62 EBPL-201ENST00000242827 914 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
COLCA1Q6ZS62 PSMG1-201ENST00000331573 2154 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
COLCA1Q6ZS62 U2AF2-206ENST00000590551 1104 ntTSL 3 BASIC21.76■■□□□ 1.07
COLCA1Q6ZS62 F8A1-201ENST00000610495 1713 ntAPPRIS P1 BASIC21.76■■□□□ 1.07
COLCA1Q6ZS62 NELFB-202ENST00000634710 1887 ntAPPRIS P2 TSL 1 (best) BASIC21.76■■□□□ 1.07
COLCA1Q6ZS62 SETBP1-202ENST00000426838 1785 ntAPPRIS ALT2 TSL 1 (best) BASIC21.76■■□□□ 1.07
COLCA1Q6ZS62 RRAD-202ENST00000420652 1476 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
COLCA1Q6ZS62 SLC35D2-203ENST00000375259 1361 ntTSL 1 (best) BASIC21.75■■□□□ 1.07
COLCA1Q6ZS62 RAD21-AS1-201ENST00000521487 2010 ntTSL 1 (best) BASIC21.75■■□□□ 1.07
COLCA1Q6ZS62 THRA-204ENST00000546243 1909 ntAPPRIS P1 TSL 2 BASIC21.75■■□□□ 1.07
COLCA1Q6ZS62 IHH-201ENST00000295731 2023 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
COLCA1Q6ZS62 TMEM55B-202ENST00000398020 1696 ntAPPRIS ALT1 TSL 1 (best) BASIC21.75■■□□□ 1.07
COLCA1Q6ZS62 PICK1-201ENST00000356976 2055 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
COLCA1Q6ZS62 LYPD6B-203ENST00000409642 1577 ntAPPRIS P3 TSL 1 (best) BASIC21.74■■□□□ 1.07
COLCA1Q6ZS62 CAAP1-205ENST00000520187 773 ntTSL 5 BASIC21.74■■□□□ 1.07
COLCA1Q6ZS62 NPDC1-201ENST00000371600 2187 ntAPPRIS ALT2 TSL 1 (best) BASIC21.73■■□□□ 1.07
COLCA1Q6ZS62 AURKAIP1-203ENST00000338370 1072 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
COLCA1Q6ZS62 NTN3-201ENST00000293973 1986 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
COLCA1Q6ZS62 ACAA1-220ENST00000627515 1862 ntTSL 5 BASIC21.73■■□□□ 1.07
COLCA1Q6ZS62 HDGFL1-201ENST00000510882 2174 ntAPPRIS P1 BASIC21.72■■□□□ 1.07
COLCA1Q6ZS62 C11orf80-210ENST00000527634 1666 ntAPPRIS ALT2 TSL 5 BASIC21.72■■□□□ 1.07
COLCA1Q6ZS62 GADD45G-201ENST00000252506 1065 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
COLCA1Q6ZS62 RP9-201ENST00000297157 1121 ntAPPRIS P2 TSL 1 (best) BASIC21.72■■□□□ 1.07
COLCA1Q6ZS62 NSMCE4A-201ENST00000369017 1224 ntTSL 1 (best) BASIC21.72■■□□□ 1.07
COLCA1Q6ZS62 AGPS-202ENST00000409888 815 ntTSL 4 BASIC21.72■■□□□ 1.07
COLCA1Q6ZS62 MXRA7-202ENST00000375036 1950 ntAPPRIS ALT2 TSL 2 BASIC21.72■■□□□ 1.07
COLCA1Q6ZS62 SLC25A6-201ENST00000381401 2062 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
COLCA1Q6ZS62 TCFL5-201ENST00000217162 2453 ntAPPRIS ALT2 TSL 1 (best) BASIC21.71■■□□□ 1.07
COLCA1Q6ZS62 TCFL5-202ENST00000335351 2456 ntAPPRIS P2 TSL 1 (best) BASIC21.71■■□□□ 1.07
COLCA1Q6ZS62 C14orf80-205ENST00000392523 1845 ntAPPRIS ALT2 TSL 1 (best) BASIC21.71■■□□□ 1.07
COLCA1Q6ZS62 HOXB3-201ENST00000311626 2642 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
COLCA1Q6ZS62 CTSA-203ENST00000372459 1972 ntTSL 1 (best) BASIC21.71■■□□□ 1.07
COLCA1Q6ZS62 UCK1-204ENST00000372215 2167 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
COLCA1Q6ZS62 ROM1-201ENST00000278833 1878 ntAPPRIS P2 TSL 1 (best) BASIC21.71■■□□□ 1.07
COLCA1Q6ZS62 ATP8B2-201ENST00000368487 1523 ntTSL 1 (best) BASIC21.7■■□□□ 1.07
COLCA1Q6ZS62 RANBP1-202ENST00000402752 1132 ntAPPRIS ALT1 TSL 1 (best) BASIC21.7■■□□□ 1.06
COLCA1Q6ZS62 CLEC3B-202ENST00000428034 752 ntTSL 2 BASIC21.7■■□□□ 1.06
COLCA1Q6ZS62 RNF166-209ENST00000567844 633 ntTSL 5 BASIC21.7■■□□□ 1.06
COLCA1Q6ZS62 AL121749.1-202ENST00000609313 2153 ntBASIC21.7■■□□□ 1.06
COLCA1Q6ZS62 VIPR2-203ENST00000402066 1926 ntAPPRIS ALT2 TSL 5 BASIC21.69■■□□□ 1.06
COLCA1Q6ZS62 ING2-201ENST00000302327 1189 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
COLCA1Q6ZS62 AC013394.1-201ENST00000629685 808 ntAPPRIS P1 TSL 5 BASIC21.69■■□□□ 1.06
COLCA1Q6ZS62 NDEL1-202ENST00000380025 2181 ntTSL 5 BASIC21.68■■□□□ 1.06
COLCA1Q6ZS62 IGFBPL1-201ENST00000377694 1093 ntAPPRIS P1 TSL 2 BASIC21.68■■□□□ 1.06
COLCA1Q6ZS62 TRIM52-AS1-203ENST00000509252 529 ntTSL 3 BASIC21.68■■□□□ 1.06
COLCA1Q6ZS62 CPTP-201ENST00000343938 2190 ntAPPRIS P1 TSL 2 BASIC21.68■■□□□ 1.06
COLCA1Q6ZS62 RAB3IL1-202ENST00000394836 2284 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
COLCA1Q6ZS62 C8orf58-202ENST00000409586 2021 ntAPPRIS ALT2 TSL 2 BASIC21.67■■□□□ 1.06
COLCA1Q6ZS62 AC009690.3-201ENST00000569547 1902 ntAPPRIS P1 TSL 2 BASIC21.67■■□□□ 1.06
COLCA1Q6ZS62 FADD-201ENST00000301838 1841 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
COLCA1Q6ZS62 BBC3-204ENST00000449228 1827 ntTSL 1 (best) BASIC21.67■■□□□ 1.06
COLCA1Q6ZS62 ANKRD53-203ENST00000441349 1797 ntTSL 5 BASIC21.67■■□□□ 1.06
COLCA1Q6ZS62 AL121987.2-201ENST00000418602 1578 ntTSL 2 BASIC21.67■■□□□ 1.06
COLCA1Q6ZS62 GSR-205ENST00000541648 1410 ntTSL 1 (best) BASIC21.67■■□□□ 1.06
COLCA1Q6ZS62 HES6-205ENST00000409356 528 ntTSL 2 BASIC21.67■■□□□ 1.06
COLCA1Q6ZS62 MACF1-219ENST00000484793 834 ntTSL 2 BASIC21.67■■□□□ 1.06
COLCA1Q6ZS62 AC008813.1-201ENST00000536597 885 ntBASIC21.67■■□□□ 1.06
COLCA1Q6ZS62 CHST11-202ENST00000546689 756 ntTSL 2 BASIC21.67■■□□□ 1.06
COLCA1Q6ZS62 NR6A1-203ENST00000416460 1898 ntAPPRIS ALT2 TSL 1 (best) BASIC21.66■■□□□ 1.06
COLCA1Q6ZS62 TSPAN4-207ENST00000397411 1025 ntAPPRIS P1 TSL 2 BASIC21.66■■□□□ 1.06
COLCA1Q6ZS62 PRR5-ARHGAP8-202ENST00000361473 2013 ntTSL 5 BASIC21.66■■□□□ 1.06
COLCA1Q6ZS62 EXOC3-209ENST00000512944 2825 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
COLCA1Q6ZS62 P2RX2-203ENST00000350048 1344 ntTSL 1 (best) BASIC21.65■■□□□ 1.06
COLCA1Q6ZS62 CR559946.2-201ENST00000623684 991 ntBASIC21.65■■□□□ 1.06
COLCA1Q6ZS62 MTMR1-214ENST00000542156 1227 ntTSL 1 (best) BASIC21.64■■□□□ 1.05
COLCA1Q6ZS62 PDCD2-209ENST00000542896 1082 ntTSL 2 BASIC21.64■■□□□ 1.05
COLCA1Q6ZS62 PIK3R2-207ENST00000617130 2187 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.05
COLCA1Q6ZS62 HAND2-201ENST00000359562 2780 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.05
COLCA1Q6ZS62 RNF19B-201ENST00000235150 2334 ntAPPRIS ALT2 TSL 1 (best) BASIC21.63■■□□□ 1.05
COLCA1Q6ZS62 HSD17B1-201ENST00000225929 1265 ntAPPRIS ALT2 TSL 2 BASIC21.63■■□□□ 1.05
COLCA1Q6ZS62 CAPNS1-215ENST00000628018 1509 ntAPPRIS ALT2 TSL 5 BASIC21.63■■□□□ 1.05
COLCA1Q6ZS62 SPATA33-209ENST00000579310 1490 ntAPPRIS ALT2 TSL 2 BASIC21.63■■□□□ 1.05
COLCA1Q6ZS62 APLP1-201ENST00000221891 2495 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
COLCA1Q6ZS62 DACT2-202ENST00000366796 2028 ntAPPRIS ALT2 TSL 1 (best) BASIC21.62■■□□□ 1.05
COLCA1Q6ZS62 EMID1-202ENST00000404755 2049 ntTSL 5 BASIC21.62■■□□□ 1.05
COLCA1Q6ZS62 CARM1-202ENST00000344150 2722 ntAPPRIS ALT2 TSL 5 BASIC21.62■■□□□ 1.05
COLCA1Q6ZS62 G6PC3-201ENST00000269097 1533 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
COLCA1Q6ZS62 CTXN1-201ENST00000318978 1274 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
COLCA1Q6ZS62 SURF1-201ENST00000371974 1093 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
COLCA1Q6ZS62 MIR3648-2-201ENST00000581792 180 ntBASIC21.62■■□□□ 1.05
COLCA1Q6ZS62 SURF1-205ENST00000615505 991 ntTSL 1 (best) BASIC21.62■■□□□ 1.05
COLCA1Q6ZS62 MIR3648-1-201ENST00000615959 180 ntBASIC21.62■■□□□ 1.05
COLCA1Q6ZS62 NAPA-201ENST00000263354 1839 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
COLCA1Q6ZS62 NPB-202ENST00000573081 2154 ntAPPRIS ALT2 BASIC21.61■■□□□ 1.05
COLCA1Q6ZS62 NXNL1-201ENST00000301944 946 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
COLCA1Q6ZS62 AC148477.6-201ENST00000623746 465 ntBASIC21.61■■□□□ 1.05
COLCA1Q6ZS62 AC092902.2-221ENST00000628476 965 ntTSL 5 BASIC21.61■■□□□ 1.05
COLCA1Q6ZS62 MEN1-204ENST00000377313 1871 ntAPPRIS P3 TSL 2 BASIC21.6■■□□□ 1.05
COLCA1Q6ZS62 POLR3H-201ENST00000337566 1330 ntTSL 1 (best) BASIC21.6■■□□□ 1.05
COLCA1Q6ZS62 ZNF768-201ENST00000380412 2315 ntAPPRIS P2 TSL 1 (best) BASIC21.6■■□□□ 1.05
COLCA1Q6ZS62 GDI1-215ENST00000630693 786 ntTSL 4 BASIC21.6■■□□□ 1.05
Retrieved 100 of 98,524 protein–RNA pairs in 16.6 ms