Protein–RNA interactions for Protein: Q6P4R8

NFRKB, Nuclear factor related to kappa-B-binding protein, humanhuman

Predictions only

Length 1,299 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NFRKBQ6P4R8 KCTD15-206ENST00000588881 1211 ntAPPRIS P1 TSL 2 BASIC28.44■■■□□ 2.14
NFRKBQ6P4R8 EPB41L4A-AS2-201ENST00000623705 1396 ntBASIC28.44■■■□□ 2.14
NFRKBQ6P4R8 ARPC5L-202ENST00000353214 2507 ntAPPRIS P1 TSL 2 BASIC28.44■■■□□ 2.14
NFRKBQ6P4R8 PEX7-203ENST00000541292 945 ntTSL 5 BASIC28.43■■■□□ 2.14
NFRKBQ6P4R8 TXNL4A-208ENST00000588162 752 ntTSL 2 BASIC28.43■■■□□ 2.14
NFRKBQ6P4R8 LSM6-202ENST00000502781 1352 ntAPPRIS P1 TSL 1 (best) BASIC28.42■■■□□ 2.14
NFRKBQ6P4R8 MIR219A2-201ENST00000608502 1504 ntBASIC28.42■■■□□ 2.14
NFRKBQ6P4R8 DCDC2C-201ENST00000399143 1476 ntAPPRIS P1 TSL 5 BASIC28.41■■■□□ 2.14
NFRKBQ6P4R8 MKRN1-202ENST00000443720 1601 ntAPPRIS ALT2 TSL 1 (best) BASIC28.41■■■□□ 2.14
NFRKBQ6P4R8 PXMP2-205ENST00000543589 632 ntTSL 3 BASIC28.41■■■□□ 2.14
NFRKBQ6P4R8 C14orf80-203ENST00000354560 1553 ntAPPRIS ALT2 TSL 1 (best) BASIC28.41■■■□□ 2.14
NFRKBQ6P4R8 RASL10A-202ENST00000401450 1720 ntTSL 2 BASIC28.4■■■□□ 2.14
NFRKBQ6P4R8 CDC34-201ENST00000215574 1471 ntAPPRIS P1 TSL 1 (best) BASIC28.4■■■□□ 2.14
NFRKBQ6P4R8 ITGA9-203ENST00000422441 2282 ntTSL 1 (best) BASIC28.4■■■□□ 2.14
NFRKBQ6P4R8 OVOL2-201ENST00000278780 1555 ntAPPRIS P1 TSL 1 (best) BASIC28.4■■■□□ 2.14
NFRKBQ6P4R8 MEST-211ENST00000437945 1455 ntTSL 5 BASIC28.4■■■□□ 2.14
NFRKBQ6P4R8 CCDC88C-205ENST00000553403 1651 ntTSL 1 (best) BASIC28.39■■■□□ 2.14
NFRKBQ6P4R8 BCL7C-201ENST00000215115 1740 ntAPPRIS P1 TSL 1 (best) BASIC28.39■■■□□ 2.14
NFRKBQ6P4R8 MARCH11-201ENST00000332432 1741 ntAPPRIS P1 TSL 5 BASIC28.39■■■□□ 2.14
NFRKBQ6P4R8 TAZ-201ENST00000369776 1596 ntTSL 1 (best) BASIC28.39■■■□□ 2.14
NFRKBQ6P4R8 GAL3ST3-203ENST00000527878 1599 ntAPPRIS P1 TSL 1 (best) BASIC28.39■■■□□ 2.14
NFRKBQ6P4R8 SLC35D2-201ENST00000253270 1613 ntAPPRIS P1 TSL 1 (best) BASIC28.39■■■□□ 2.13
NFRKBQ6P4R8 GPR137-202ENST00000377702 1478 ntTSL 1 (best) BASIC28.39■■■□□ 2.13
NFRKBQ6P4R8 SNX5-219ENST00000606602 885 ntTSL 1 (best) BASIC28.38■■■□□ 2.13
NFRKBQ6P4R8 IRX1-201ENST00000302006 1858 ntAPPRIS P1 TSL 1 (best) BASIC28.38■■■□□ 2.13
NFRKBQ6P4R8 AQP1-203ENST00000409899 1009 ntTSL 1 (best) BASIC28.37■■■□□ 2.13
NFRKBQ6P4R8 TTC39C-209ENST00000584250 1048 ntTSL 1 (best) BASIC28.37■■■□□ 2.13
NFRKBQ6P4R8 HYI-213ENST00000583037 1322 ntTSL 5 BASIC28.37■■■□□ 2.13
NFRKBQ6P4R8 INPP4A-203ENST00000409463 1565 ntTSL 1 (best) BASIC28.37■■■□□ 2.13
NFRKBQ6P4R8 NEUROG2-201ENST00000313341 2287 ntAPPRIS P1 TSL 1 (best) BASIC28.36■■■□□ 2.13
NFRKBQ6P4R8 FGF13-AS1-202ENST00000446383 584 ntTSL 3 BASIC28.36■■■□□ 2.13
NFRKBQ6P4R8 EID2-201ENST00000390658 1629 ntAPPRIS P1 BASIC28.36■■■□□ 2.13
NFRKBQ6P4R8 SHOX2-204ENST00000483851 1866 ntAPPRIS ALT2 TSL 2 BASIC28.36■■■□□ 2.13
NFRKBQ6P4R8 AL590677.1-201ENST00000438431 380 ntTSL 5 BASIC28.35■■■□□ 2.13
NFRKBQ6P4R8 TRIM52-AS1-202ENST00000507434 672 ntTSL 1 (best) BASIC28.35■■■□□ 2.13
NFRKBQ6P4R8 MANF-204ENST00000528157 1153 ntAPPRIS P1 TSL 1 (best) BASIC28.35■■■□□ 2.13
NFRKBQ6P4R8 AC092296.2-201ENST00000589470 999 ntBASIC28.35■■■□□ 2.13
NFRKBQ6P4R8 TBX2-AS1-202ENST00000589814 539 ntTSL 3 BASIC28.35■■■□□ 2.13
NFRKBQ6P4R8 U85056.1-201ENST00000616429 682 ntBASIC28.35■■■□□ 2.13
NFRKBQ6P4R8 PRELID2-207ENST00000511435 1894 ntAPPRIS ALT1 TSL 2 BASIC28.35■■■□□ 2.13
NFRKBQ6P4R8 ARHGAP22-202ENST00000374170 2107 ntTSL 5 BASIC28.34■■■□□ 2.13
NFRKBQ6P4R8 MAZ-205ENST00000562337 1574 ntTSL 3 BASIC28.34■■■□□ 2.13
NFRKBQ6P4R8 CCND3-203ENST00000372991 2085 ntAPPRIS P1 TSL 1 (best) BASIC28.34■■■□□ 2.13
NFRKBQ6P4R8 ITPKA-201ENST00000260386 1824 ntAPPRIS P1 TSL 1 (best) BASIC28.34■■■□□ 2.13
NFRKBQ6P4R8 RAB40C-201ENST00000248139 2699 ntAPPRIS P1 TSL 1 (best) BASIC28.34■■■□□ 2.13
NFRKBQ6P4R8 ZSCAN1-202ENST00000391700 952 ntTSL 1 (best) BASIC28.33■■■□□ 2.13
NFRKBQ6P4R8 SLC16A8-201ENST00000320521 1878 ntAPPRIS P1 TSL 1 (best) BASIC28.33■■■□□ 2.13
NFRKBQ6P4R8 RDX-210ENST00000530301 1549 ntTSL 1 (best) BASIC28.33■■■□□ 2.13
NFRKBQ6P4R8 MCCD1-201ENST00000376191 955 ntAPPRIS P1 TSL 1 (best) BASIC28.32■■■□□ 2.12
NFRKBQ6P4R8 UPF3A-209ENST00000492270 494 ntTSL 2 BASIC28.32■■■□□ 2.12
NFRKBQ6P4R8 G6PC3-201ENST00000269097 1533 ntAPPRIS P1 TSL 1 (best) BASIC28.32■■■□□ 2.12
NFRKBQ6P4R8 ENDOG-201ENST00000372642 1172 ntAPPRIS P1 TSL 1 (best) BASIC28.31■■■□□ 2.12
NFRKBQ6P4R8 AC018358.1-201ENST00000631079 1402 ntBASIC28.31■■■□□ 2.12
NFRKBQ6P4R8 CRELD2-203ENST00000404488 1577 ntAPPRIS ALT2 TSL 1 (best) BASIC28.31■■■□□ 2.12
NFRKBQ6P4R8 AMZ2-201ENST00000359783 1722 ntTSL 5 BASIC28.31■■■□□ 2.12
NFRKBQ6P4R8 COL13A1-203ENST00000398969 2267 ntAPPRIS ALT2 TSL 5 BASIC28.31■■■□□ 2.12
NFRKBQ6P4R8 CIB2-201ENST00000258930 1598 ntAPPRIS P1 TSL 1 (best) BASIC28.3■■■□□ 2.12
NFRKBQ6P4R8 CMPK2-203ENST00000458098 1224 ntTSL 1 (best) BASIC28.3■■■□□ 2.12
NFRKBQ6P4R8 FAM117A-201ENST00000240364 2365 ntAPPRIS P2 TSL 1 (best) BASIC28.3■■■□□ 2.12
NFRKBQ6P4R8 BTBD19-201ENST00000409335 1214 ntTSL 5 BASIC28.29■■■□□ 2.12
NFRKBQ6P4R8 MAP4K3-211ENST00000484274 407 ntTSL 2 BASIC28.29■■■□□ 2.12
NFRKBQ6P4R8 C11orf96-203ENST00000617612 1294 ntAPPRIS P1 BASIC28.29■■■□□ 2.12
NFRKBQ6P4R8 YBX2-201ENST00000007699 1590 ntAPPRIS P1 TSL 1 (best) BASIC28.28■■■□□ 2.12
NFRKBQ6P4R8 MRPL23-202ENST00000381519 643 ntAPPRIS P1 TSL 3 BASIC28.28■■■□□ 2.12
NFRKBQ6P4R8 MRPL23-205ENST00000397298 736 ntAPPRIS P1 TSL 1 (best) BASIC28.28■■■□□ 2.12
NFRKBQ6P4R8 AL033527.3-201ENST00000566366 1196 ntBASIC28.28■■■□□ 2.12
NFRKBQ6P4R8 TNFRSF25-204ENST00000356876 1625 ntAPPRIS ALT2 TSL 1 (best) BASIC28.28■■■□□ 2.12
NFRKBQ6P4R8 SPATA33-209ENST00000579310 1490 ntAPPRIS ALT2 TSL 2 BASIC28.27■■■□□ 2.12
NFRKBQ6P4R8 METTL24-201ENST00000338882 1119 ntAPPRIS P1 TSL 5 BASIC28.27■■■□□ 2.12
NFRKBQ6P4R8 ENHO-201ENST00000399775 1082 ntAPPRIS P1 TSL 2 BASIC28.27■■■□□ 2.12
NFRKBQ6P4R8 ECEL1P2-201ENST00000461596 1295 ntBASIC28.27■■■□□ 2.12
NFRKBQ6P4R8 FOXQ1-201ENST00000296839 2309 ntAPPRIS P1 BASIC28.27■■■□□ 2.12
NFRKBQ6P4R8 YAP1-204ENST00000526343 2393 ntTSL 5 BASIC28.26■■■□□ 2.12
NFRKBQ6P4R8 SP8-201ENST00000361443 1714 ntAPPRIS P3 TSL 1 (best) BASIC28.26■■■□□ 2.12
NFRKBQ6P4R8 AC126177.7-201ENST00000547904 679 ntBASIC28.26■■■□□ 2.11
NFRKBQ6P4R8 RPUSD1-208ENST00000567114 1835 ntTSL 2 BASIC28.26■■■□□ 2.11
NFRKBQ6P4R8 FEV-201ENST00000295727 1879 ntAPPRIS P1 TSL 1 (best) BASIC28.25■■■□□ 2.11
NFRKBQ6P4R8 TMEM150A-202ENST00000334462 1518 ntAPPRIS P1 TSL 1 (best) BASIC28.25■■■□□ 2.11
NFRKBQ6P4R8 TMEM9-201ENST00000367330 1959 ntAPPRIS P3 TSL 1 (best) BASIC28.25■■■□□ 2.11
NFRKBQ6P4R8 C20orf24-203ENST00000373852 1059 ntTSL 1 (best) BASIC28.25■■■□□ 2.11
NFRKBQ6P4R8 PLEKHJ1-204ENST00000586608 935 ntTSL 3 BASIC28.24■■■□□ 2.11
NFRKBQ6P4R8 CADPS-215ENST00000490353 2669 ntTSL 5 BASIC28.23■■■□□ 2.11
NFRKBQ6P4R8 IZUMO4-202ENST00000395301 1021 ntAPPRIS ALT2 TSL 1 (best) BASIC28.23■■■□□ 2.11
NFRKBQ6P4R8 SAP25-204ENST00000622764 1031 ntAPPRIS ALT2 TSL 5 BASIC28.23■■■□□ 2.11
NFRKBQ6P4R8 FEZ1-201ENST00000278919 1748 ntAPPRIS P1 TSL 1 (best) BASIC28.23■■■□□ 2.11
NFRKBQ6P4R8 SENP3-201ENST00000321337 2611 ntAPPRIS P1 TSL 1 (best) BASIC28.22■■■□□ 2.11
NFRKBQ6P4R8 SIGMAR1-203ENST00000378892 1743 ntTSL 2 BASIC28.22■■■□□ 2.11
NFRKBQ6P4R8 ACOT1-202ENST00000557556 1271 ntTSL 1 (best) BASIC28.22■■■□□ 2.11
NFRKBQ6P4R8 FCGRT-217ENST00000599988 660 ntTSL 5 BASIC28.22■■■□□ 2.11
NFRKBQ6P4R8 OPRD1-202ENST00000621425 1217 ntTSL 1 (best) BASIC28.22■■■□□ 2.11
NFRKBQ6P4R8 FOXE3-201ENST00000335071 1981 ntAPPRIS P1 BASIC28.22■■■□□ 2.11
NFRKBQ6P4R8 SSBP3-202ENST00000357475 1533 ntTSL 1 (best) BASIC28.22■■■□□ 2.11
NFRKBQ6P4R8 EFNA3-201ENST00000368408 1782 ntAPPRIS P1 TSL 1 (best) BASIC28.22■■■□□ 2.11
NFRKBQ6P4R8 AP004833.2-201ENST00000532228 1454 ntBASIC28.21■■■□□ 2.11
NFRKBQ6P4R8 AC027237.3-202ENST00000558617 1778 ntTSL 2 BASIC28.21■■■□□ 2.11
NFRKBQ6P4R8 ZMYND19-201ENST00000298585 1375 ntAPPRIS P1 TSL 1 (best) BASIC28.21■■■□□ 2.11
NFRKBQ6P4R8 COL13A1-213ENST00000520267 2276 ntAPPRIS ALT2 TSL 5 BASIC28.2■■■□□ 2.11
NFRKBQ6P4R8 KRT18P60-201ENST00000312876 1297 ntBASIC28.2■■■□□ 2.1
NFRKBQ6P4R8 WDR86-204ENST00000477459 1428 ntTSL 2 BASIC28.19■■■□□ 2.1
NFRKBQ6P4R8 MED25-210ENST00000612854 801 ntTSL 5 BASIC28.19■■■□□ 2.1
Retrieved 100 of 98,524 protein–RNA pairs in 139.3 ms