Protein–RNA interactions for Protein: Q6P161

MRPL54, 39S ribosomal protein L54, mitochondrial, humanhuman

Known RBP Predictions only

Length 138 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MRPL54Q6P161 PPM1B-202ENST00000345249 1713 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
MRPL54Q6P161 REPS2-202ENST00000357277 7953 ntAPPRIS P3 TSL 1 (best) BASIC18.91■□□□□ 0.62
MRPL54Q6P161 KAT8-206ENST00000543774 1846 ntAPPRIS P1 TSL 5 BASIC18.91■□□□□ 0.62
MRPL54Q6P161 EXOSC6-201ENST00000435634 5153 ntAPPRIS P1 BASIC18.91■□□□□ 0.62
MRPL54Q6P161 STUB1-205ENST00000565677 1560 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
MRPL54Q6P161 SP8-202ENST00000418710 1618 ntAPPRIS ALT2 TSL 1 (best) BASIC18.91■□□□□ 0.62
MRPL54Q6P161 IRAK1-205ENST00000429936 2127 ntTSL 5 BASIC18.91■□□□□ 0.62
MRPL54Q6P161 BTBD2-201ENST00000255608 2649 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
MRPL54Q6P161 ONECUT3-201ENST00000382349 8318 ntAPPRIS P1 TSL 5 BASIC18.9■□□□□ 0.62
MRPL54Q6P161 MYPOP-201ENST00000322217 1890 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
MRPL54Q6P161 PMS1-205ENST00000409985 1882 ntTSL 2 BASIC18.9■□□□□ 0.62
MRPL54Q6P161 UBE2J2-202ENST00000349431 1733 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
MRPL54Q6P161 MYBL1-204ENST00000522677 5192 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
MRPL54Q6P161 LINC01578-201ENST00000553829 732 ntTSL 2 BASIC18.89■□□□□ 0.61
MRPL54Q6P161 FGF2-203ENST00000614010 867 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
MRPL54Q6P161 NRGN-201ENST00000284292 1306 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
MRPL54Q6P161 TRIM54-201ENST00000296098 2027 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
MRPL54Q6P161 PCYT2-202ENST00000538721 1765 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
MRPL54Q6P161 ABHD17C-201ENST00000258884 2368 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
MRPL54Q6P161 KLF15-201ENST00000296233 2574 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
MRPL54Q6P161 GABBR2-201ENST00000259455 5788 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
MRPL54Q6P161 DLX2-202ENST00000466293 1852 ntTSL 2 BASIC18.88■□□□□ 0.61
MRPL54Q6P161 USP25-203ENST00000351097 2158 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
MRPL54Q6P161 DYRK1B-201ENST00000323039 2535 ntAPPRIS P3 TSL 1 (best) BASIC18.88■□□□□ 0.61
MRPL54Q6P161 MYCL-202ENST00000372816 1688 ntAPPRIS P3 TSL 2 BASIC18.87■□□□□ 0.61
MRPL54Q6P161 AC079848.1-201ENST00000511301 327 ntTSL 3 BASIC18.87■□□□□ 0.61
MRPL54Q6P161 SV2B-203ENST00000545111 2099 ntTSL 2 BASIC18.87■□□□□ 0.61
MRPL54Q6P161 NRARP-201ENST00000356628 1770 ntAPPRIS P1 BASIC18.86■□□□□ 0.61
MRPL54Q6P161 AC006455.5-202ENST00000615248 2284 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
MRPL54Q6P161 DHFR-203ENST00000505337 1719 ntAPPRIS P1 TSL 2 BASIC18.86■□□□□ 0.61
MRPL54Q6P161 LYPLA1-215ENST00000618914 2482 ntTSL 5 BASIC18.85■□□□□ 0.61
MRPL54Q6P161 CTBP2-211ENST00000494626 2014 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
MRPL54Q6P161 EBPL-203ENST00000378270 579 ntTSL 2 BASIC18.85■□□□□ 0.61
MRPL54Q6P161 BMP2K-204ENST00000502871 3195 ntAPPRIS P3 TSL 1 (best) BASIC18.85■□□□□ 0.61
MRPL54Q6P161 PRELID2-207ENST00000511435 1894 ntAPPRIS ALT1 TSL 2 BASIC18.85■□□□□ 0.61
MRPL54Q6P161 MEIS2-204ENST00000397620 2295 ntTSL 2 BASIC18.85■□□□□ 0.61
MRPL54Q6P161 RNF19B-203ENST00000373456 2560 ntAPPRIS P3 TSL 1 (best) BASIC18.85■□□□□ 0.61
MRPL54Q6P161 AGPAT2-202ENST00000371696 1512 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
MRPL54Q6P161 ATP5G2-208ENST00000552242 1950 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
MRPL54Q6P161 CDPF1-201ENST00000314567 1875 ntAPPRIS P2 TSL 1 (best) BASIC18.84■□□□□ 0.61
MRPL54Q6P161 RUNX2-210ENST00000576263 2256 ntTSL 5 BASIC18.84■□□□□ 0.61
MRPL54Q6P161 EGR4-201ENST00000436467 2377 ntAPPRIS ALT2 TSL 1 (best) BASIC18.84■□□□□ 0.61
MRPL54Q6P161 CCNYL1-203ENST00000392209 1952 ntTSL 2 BASIC18.84■□□□□ 0.61
MRPL54Q6P161 NRG1-210ENST00000520407 1955 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
MRPL54Q6P161 FLT1-202ENST00000539099 1911 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
MRPL54Q6P161 RABL6-202ENST00000357466 1820 ntAPPRIS ALT2 TSL 1 (best) BASIC18.84■□□□□ 0.61
MRPL54Q6P161 GBX2-201ENST00000306318 2123 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.61
MRPL54Q6P161 ARL2-SNX15-201ENST00000301886 2392 ntAPPRIS P1 TSL 2 BASIC18.83■□□□□ 0.61
MRPL54Q6P161 CATIP-201ENST00000289388 1323 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.61
MRPL54Q6P161 EZH2-206ENST00000478654 2522 ntTSL 5 BASIC18.83■□□□□ 0.6
MRPL54Q6P161 BTBD6-204ENST00000463376 2195 ntAPPRIS ALT2 TSL 2 BASIC18.83■□□□□ 0.6
MRPL54Q6P161 SLC4A3-203ENST00000358055 4454 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
MRPL54Q6P161 AUTS2-203ENST00000406775 5950 ntAPPRIS ALT2 TSL 1 (best) BASIC18.83■□□□□ 0.6
MRPL54Q6P161 CD6-206ENST00000452451 1782 ntAPPRIS ALT2 TSL 1 (best) BASIC18.82■□□□□ 0.6
MRPL54Q6P161 GTPBP3-203ENST00000361619 1894 ntTSL 2 BASIC18.82■□□□□ 0.6
MRPL54Q6P161 KREMEN2-204ENST00000572045 2339 ntAPPRIS ALT2 TSL 1 (best) BASIC18.81■□□□□ 0.6
MRPL54Q6P161 GSX1-201ENST00000302945 1663 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
MRPL54Q6P161 GRK6-206ENST00000507633 1660 ntTSL 5 BASIC18.81■□□□□ 0.6
MRPL54Q6P161 TBCC-201ENST00000372876 1616 ntAPPRIS P1 BASIC18.81■□□□□ 0.6
MRPL54Q6P161 NECTIN2-202ENST00000252485 2112 ntAPPRIS P3 TSL 1 (best) BASIC18.8■□□□□ 0.6
MRPL54Q6P161 MORF4L1-203ENST00000426013 1880 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
MRPL54Q6P161 FOXF2-201ENST00000259806 2187 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
MRPL54Q6P161 CCDC160-202ENST00000517294 1790 ntAPPRIS P1 TSL 5 BASIC18.8■□□□□ 0.6
MRPL54Q6P161 BAMBI-201ENST00000375533 1877 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
MRPL54Q6P161 LINC00588-201ENST00000521663 1875 ntTSL 2 BASIC18.8■□□□□ 0.6
MRPL54Q6P161 NDEL1-201ENST00000334527 2372 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
MRPL54Q6P161 DLK2-201ENST00000357338 2038 ntAPPRIS P3 TSL 2 BASIC18.79■□□□□ 0.6
MRPL54Q6P161 BCL11B-203ENST00000443726 2599 ntAPPRIS ALT2 TSL 5 BASIC18.79■□□□□ 0.6
MRPL54Q6P161 SPIRE2-205ENST00000563972 1823 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
MRPL54Q6P161 SYT7-203ENST00000539008 2061 ntTSL 5 BASIC18.78■□□□□ 0.6
MRPL54Q6P161 GSTZ1-201ENST00000216465 1338 ntAPPRIS P2 TSL 1 (best) BASIC18.78■□□□□ 0.6
MRPL54Q6P161 ERGIC1-202ENST00000393784 2881 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
MRPL54Q6P161 BIN1-203ENST00000346226 2401 ntAPPRIS ALT2 TSL 1 (best) BASIC18.78■□□□□ 0.6
MRPL54Q6P161 THRA-202ENST00000394121 2260 ntTSL 2 BASIC18.78■□□□□ 0.6
MRPL54Q6P161 ATG16L2-201ENST00000321297 2243 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
MRPL54Q6P161 ATP5G2-201ENST00000338662 1792 ntTSL 2 BASIC18.78■□□□□ 0.6
MRPL54Q6P161 SOS2-201ENST00000216373 5498 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
MRPL54Q6P161 GTPBP3-202ENST00000358792 1951 ntAPPRIS P4 TSL 2 BASIC18.77■□□□□ 0.6
MRPL54Q6P161 SLC16A11-201ENST00000308009 1803 ntAPPRIS P2 TSL 1 (best) BASIC18.77■□□□□ 0.6
MRPL54Q6P161 NKX2-3-201ENST00000344586 2097 ntAPPRIS P1 TSL 2 BASIC18.77■□□□□ 0.6
MRPL54Q6P161 FEZ2-204ENST00000405912 1931 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
MRPL54Q6P161 CPLX1-201ENST00000304062 2181 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
MRPL54Q6P161 ATAD3B-201ENST00000308647 2448 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
MRPL54Q6P161 WASH5P-204ENST00000632292 975 ntBASIC18.77■□□□□ 0.6
MRPL54Q6P161 ECI1-207ENST00000570258 1512 ntAPPRIS ALT2 TSL 5 BASIC18.77■□□□□ 0.6
MRPL54Q6P161 PRR5-ARHGAP8-202ENST00000361473 2013 ntTSL 5 BASIC18.77■□□□□ 0.6
MRPL54Q6P161 BIN1-205ENST00000351659 2365 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
MRPL54Q6P161 FKBP1A-205ENST00000439640 1583 ntTSL 3 BASIC18.76■□□□□ 0.59
MRPL54Q6P161 ANKS3-203ENST00000450067 2272 ntTSL 5 BASIC18.76■□□□□ 0.59
MRPL54Q6P161 MAGI2-202ENST00000419488 6800 ntAPPRIS ALT2 TSL 1 (best) BASIC18.76■□□□□ 0.59
MRPL54Q6P161 HMGB1-205ENST00000399494 1282 ntAPPRIS P1 TSL 2 BASIC18.76■□□□□ 0.59
MRPL54Q6P161 IL17RE-203ENST00000421412 2158 ntAPPRIS ALT2 TSL 1 (best) BASIC18.76■□□□□ 0.59
MRPL54Q6P161 RARA-202ENST00000394081 2285 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
MRPL54Q6P161 MAF-202ENST00000393350 6384 ntAPPRIS ALT2 BASIC18.75■□□□□ 0.59
MRPL54Q6P161 TOMM40-201ENST00000252487 1707 ntAPPRIS P2 TSL 1 (best) BASIC18.74■□□□□ 0.59
MRPL54Q6P161 TOMM40-202ENST00000405636 1709 ntAPPRIS P2 TSL 1 (best) BASIC18.74■□□□□ 0.59
MRPL54Q6P161 C14orf80-205ENST00000392523 1845 ntAPPRIS ALT2 TSL 1 (best) BASIC18.74■□□□□ 0.59
MRPL54Q6P161 BBC3-204ENST00000449228 1827 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
MRPL54Q6P161 CDC16-211ENST00000628084 2058 ntTSL 5 BASIC18.73■□□□□ 0.59
MRPL54Q6P161 DUSP8P4-201ENST00000399538 1761 ntBASIC18.73■□□□□ 0.59
Retrieved 100 of 98,524 protein–RNA pairs in 60.9 ms