Protein–RNA interactions for Protein: Q6ISU1

PTCRA, Pre T-cell antigen receptor alpha, humanhuman

Predicted RBP Predictions only

Length 281 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTCRAQ6ISU1 SPATA33-209ENST00000579310 1490 ntAPPRIS ALT2 TSL 2 BASIC26.62■■□□□ 1.85
PTCRAQ6ISU1 S100A6-201ENST00000368719 665 ntAPPRIS P1 TSL 1 (best) BASIC26.62■■□□□ 1.85
PTCRAQ6ISU1 MIR935-201ENST00000401179 91 ntBASIC26.62■■□□□ 1.85
PTCRAQ6ISU1 AC053527.1-201ENST00000502790 685 ntTSL 3 BASIC26.62■■□□□ 1.85
PTCRAQ6ISU1 CDKN2A-214ENST00000579755 1283 ntAPPRIS P1 TSL 1 (best) BASIC26.62■■□□□ 1.85
PTCRAQ6ISU1 WBP1-201ENST00000233615 1294 ntAPPRIS P2 TSL 1 (best) BASIC26.61■■□□□ 1.85
PTCRAQ6ISU1 PTPA-210ENST00000414510 1153 ntTSL 1 (best) BASIC26.61■■□□□ 1.85
PTCRAQ6ISU1 QDPR-202ENST00000428702 1278 ntTSL 2 BASIC26.61■■□□□ 1.85
PTCRAQ6ISU1 PSMG4-206ENST00000438998 838 ntAPPRIS P1 TSL 2 BASIC26.61■■□□□ 1.85
PTCRAQ6ISU1 C17orf74-202ENST00000574034 1287 ntTSL 1 (best) BASIC26.61■■□□□ 1.85
PTCRAQ6ISU1 ABHD17B-202ENST00000377041 1312 ntAPPRIS P4 TSL 1 (best) BASIC26.61■■□□□ 1.85
PTCRAQ6ISU1 GRK6-206ENST00000507633 1660 ntTSL 5 BASIC26.6■■□□□ 1.85
PTCRAQ6ISU1 SAMD1-202ENST00000533683 2164 ntAPPRIS P5 TSL 1 (best) BASIC26.6■■□□□ 1.85
PTCRAQ6ISU1 C14orf80-203ENST00000354560 1553 ntAPPRIS ALT2 TSL 1 (best) BASIC26.6■■□□□ 1.85
PTCRAQ6ISU1 AC104002.3-202ENST00000557170 1100 ntTSL 3 BASIC26.6■■□□□ 1.85
PTCRAQ6ISU1 TMEM54-201ENST00000329151 871 ntTSL 1 (best) BASIC26.59■■□□□ 1.85
PTCRAQ6ISU1 MPC1-201ENST00000341756 976 ntTSL 1 (best) BASIC26.59■■□□□ 1.85
PTCRAQ6ISU1 AC009511.2-201ENST00000545904 679 ntTSL 2 BASIC26.59■■□□□ 1.85
PTCRAQ6ISU1 MPC1-206ENST00000621630 977 ntAPPRIS ALT1 TSL 5 BASIC26.59■■□□□ 1.85
PTCRAQ6ISU1 MPC1-207ENST00000621685 1192 ntTSL 5 BASIC26.59■■□□□ 1.85
PTCRAQ6ISU1 HOXB3-210ENST00000489475 1845 ntTSL 2 BASIC26.59■■□□□ 1.85
PTCRAQ6ISU1 OVOL2-201ENST00000278780 1555 ntAPPRIS P1 TSL 1 (best) BASIC26.58■■□□□ 1.85
PTCRAQ6ISU1 CLEC11A-201ENST00000250340 1419 ntAPPRIS P1 TSL 1 (best) BASIC26.58■■□□□ 1.85
PTCRAQ6ISU1 CARS2-201ENST00000257347 1879 ntAPPRIS P1 TSL 1 (best) BASIC26.58■■□□□ 1.85
PTCRAQ6ISU1 LRRC61-202ENST00000359623 1877 ntAPPRIS P1 TSL 2 BASIC26.58■■□□□ 1.85
PTCRAQ6ISU1 CD63-201ENST00000257857 1070 ntAPPRIS P1 TSL 1 (best) BASIC26.58■■□□□ 1.85
PTCRAQ6ISU1 DUX4L9-201ENST00000449051 1259 ntBASIC26.58■■□□□ 1.85
PTCRAQ6ISU1 AC074183.2-201ENST00000623112 922 ntBASIC26.58■■□□□ 1.85
PTCRAQ6ISU1 TYMP-201ENST00000252029 1630 ntAPPRIS P3 TSL 1 (best) BASIC26.57■■□□□ 1.84
PTCRAQ6ISU1 C7orf50-202ENST00000397098 2131 ntAPPRIS P2 TSL 1 (best) BASIC26.57■■□□□ 1.84
PTCRAQ6ISU1 U2AF1-202ENST00000380276 940 ntAPPRIS ALT2 TSL 1 (best) BASIC26.57■■□□□ 1.84
PTCRAQ6ISU1 GUSBP5-201ENST00000418136 578 ntBASIC26.57■■□□□ 1.84
PTCRAQ6ISU1 NKX2-1-204ENST00000522719 1417 ntAPPRIS P1 TSL 1 (best) BASIC26.56■■□□□ 1.84
PTCRAQ6ISU1 GSR-205ENST00000541648 1410 ntTSL 1 (best) BASIC26.56■■□□□ 1.84
PTCRAQ6ISU1 TPI1-210ENST00000613953 1460 ntTSL 1 (best) BASIC26.56■■□□□ 1.84
PTCRAQ6ISU1 C9orf47-202ENST00000375850 859 ntAPPRIS ALT2 TSL 3 BASIC26.56■■□□□ 1.84
PTCRAQ6ISU1 PITX3-202ENST00000539804 1187 ntAPPRIS P1 TSL 5 BASIC26.56■■□□□ 1.84
PTCRAQ6ISU1 RAET1E-AS1-203ENST00000606915 1210 ntTSL 1 (best) BASIC26.56■■□□□ 1.84
PTCRAQ6ISU1 WBP1-202ENST00000393972 1325 ntTSL 2 BASIC26.56■■□□□ 1.84
PTCRAQ6ISU1 YBX1P4-201ENST00000392794 808 ntBASIC26.55■■□□□ 1.84
PTCRAQ6ISU1 AC026202.3-201ENST00000600805 1127 ntBASIC26.55■■□□□ 1.84
PTCRAQ6ISU1 DEXI-202ENST00000469379 1393 ntAPPRIS P1 TSL 2 BASIC26.55■■□□□ 1.84
PTCRAQ6ISU1 SMPD5-203ENST00000639008 1464 ntBASIC26.55■■□□□ 1.84
PTCRAQ6ISU1 C1QTNF8-201ENST00000328449 1627 ntAPPRIS P1 TSL 5 BASIC26.54■■□□□ 1.84
PTCRAQ6ISU1 CHST12-204ENST00000618655 2131 ntAPPRIS P1 TSL 1 (best) BASIC26.54■■□□□ 1.84
PTCRAQ6ISU1 C11orf63-202ENST00000307257 1964 ntTSL 2 BASIC26.53■■□□□ 1.84
PTCRAQ6ISU1 C17orf49-201ENST00000439424 850 ntAPPRIS P3 TSL 1 (best) BASIC26.53■■□□□ 1.84
PTCRAQ6ISU1 OR2A1-AS1-204ENST00000470435 602 ntBASIC26.53■■□□□ 1.84
PTCRAQ6ISU1 SH3GLB2-201ENST00000372554 1985 ntTSL 1 (best) BASIC26.53■■□□□ 1.84
PTCRAQ6ISU1 RPL27A-206ENST00000530022 878 ntTSL 1 (best) BASIC26.52■■□□□ 1.84
PTCRAQ6ISU1 KCNG2-201ENST00000316249 1401 ntAPPRIS P1 TSL 1 (best) BASIC26.51■■□□□ 1.83
PTCRAQ6ISU1 SDF2L1-201ENST00000248958 865 ntAPPRIS P1 TSL 1 (best) BASIC26.51■■□□□ 1.83
PTCRAQ6ISU1 NAXE-203ENST00000368235 1125 ntAPPRIS P1 TSL 1 (best) BASIC26.51■■□□□ 1.83
PTCRAQ6ISU1 RHOBTB3-206ENST00000506817 1432 ntTSL 2 BASIC26.5■■□□□ 1.83
PTCRAQ6ISU1 YIF1A-201ENST00000359461 943 ntTSL 2 BASIC26.5■■□□□ 1.83
PTCRAQ6ISU1 YIF1A-203ENST00000376901 1124 ntAPPRIS P1 TSL 1 (best) BASIC26.5■■□□□ 1.83
PTCRAQ6ISU1 MDK-203ENST00000395566 828 ntAPPRIS P2 TSL 1 (best) BASIC26.5■■□□□ 1.83
PTCRAQ6ISU1 PKNOX2-AS1-201ENST00000532316 586 ntTSL 3 BASIC26.5■■□□□ 1.83
PTCRAQ6ISU1 BEX3-202ENST00000372634 753 ntTSL 2 BASIC26.49■■□□□ 1.83
PTCRAQ6ISU1 AC139795.1-202ENST00000500444 432 ntBASIC26.49■■□□□ 1.83
PTCRAQ6ISU1 TRAF7-203ENST00000565383 799 ntTSL 5 BASIC26.49■■□□□ 1.83
PTCRAQ6ISU1 RASSF7-202ENST00000397583 1928 ntAPPRIS P3 TSL 1 (best) BASIC26.49■■□□□ 1.83
PTCRAQ6ISU1 AC103834.1-201ENST00000520383 144 ntBASIC26.48■■□□□ 1.83
PTCRAQ6ISU1 UBE2E3-213ENST00000602959 909 ntAPPRIS P1 TSL 5 BASIC26.48■■□□□ 1.83
PTCRAQ6ISU1 UBAC1-201ENST00000371756 1867 ntAPPRIS P1 TSL 1 (best) BASIC26.48■■□□□ 1.83
PTCRAQ6ISU1 CHKB-AS1-201ENST00000380711 578 ntTSL 2 BASIC26.47■■□□□ 1.83
PTCRAQ6ISU1 AC145124.1-201ENST00000528514 1361 ntTSL 2 BASIC26.46■■□□□ 1.83
PTCRAQ6ISU1 SSBP4-201ENST00000270061 1768 ntAPPRIS P3 TSL 1 (best) BASIC26.46■■□□□ 1.83
PTCRAQ6ISU1 PKIG-206ENST00000372892 1338 ntAPPRIS P1 TSL 2 BASIC26.46■■□□□ 1.83
PTCRAQ6ISU1 TRIOBP-205ENST00000407319 2125 ntAPPRIS P3 TSL 1 (best) BASIC26.46■■□□□ 1.83
PTCRAQ6ISU1 AC139795.1-203ENST00000515045 853 ntTSL 2 BASIC26.46■■□□□ 1.83
PTCRAQ6ISU1 PTGER1-201ENST00000292513 1421 ntAPPRIS P1 TSL 1 (best) BASIC26.46■■□□□ 1.83
PTCRAQ6ISU1 TTC36-201ENST00000302783 874 ntAPPRIS P1 TSL 1 (best) BASIC26.45■■□□□ 1.82
PTCRAQ6ISU1 CDKN2B-202ENST00000380142 859 ntTSL 1 (best) BASIC26.45■■□□□ 1.82
PTCRAQ6ISU1 CENPX-202ENST00000392359 805 ntAPPRIS P1 TSL 2 BASIC26.45■■□□□ 1.82
PTCRAQ6ISU1 PEMT-202ENST00000395781 1050 ntTSL 2 BASIC26.45■■□□□ 1.82
PTCRAQ6ISU1 ZEB1-AS1-205ENST00000605946 382 ntTSL 5 BASIC26.45■■□□□ 1.82
PTCRAQ6ISU1 CAMK2N2-201ENST00000296238 1362 ntAPPRIS P1 TSL 1 (best) BASIC26.45■■□□□ 1.82
PTCRAQ6ISU1 FOXP1-201ENST00000318779 843 ntTSL 1 (best) BASIC26.44■■□□□ 1.82
PTCRAQ6ISU1 H2AFY-204ENST00000423969 924 ntTSL 2 BASIC26.44■■□□□ 1.82
PTCRAQ6ISU1 PLA2G10-201ENST00000438167 1000 ntAPPRIS P1 TSL 1 (best) BASIC26.44■■□□□ 1.82
PTCRAQ6ISU1 AL355490.1-201ENST00000445808 805 ntTSL 3 BASIC26.44■■□□□ 1.82
PTCRAQ6ISU1 TMEM218-215ENST00000532407 1103 ntAPPRIS P1 TSL 1 (best) BASIC26.44■■□□□ 1.82
PTCRAQ6ISU1 BCL7B-201ENST00000223368 1975 ntAPPRIS P1 TSL 1 (best) BASIC26.44■■□□□ 1.82
PTCRAQ6ISU1 MAPK12-201ENST00000215659 1918 ntAPPRIS P1 TSL 1 (best) BASIC26.43■■□□□ 1.82
PTCRAQ6ISU1 AL356441.2-201ENST00000443009 864 ntBASIC26.43■■□□□ 1.82
PTCRAQ6ISU1 NKIRAS2-208ENST00000462043 585 ntTSL 4 BASIC26.43■■□□□ 1.82
PTCRAQ6ISU1 CCER2-201ENST00000571838 1057 ntAPPRIS P2 TSL 5 BASIC26.43■■□□□ 1.82
PTCRAQ6ISU1 NBPF26-209ENST00000624419 1133 ntTSL 5 BASIC26.43■■□□□ 1.82
PTCRAQ6ISU1 MKRN1-202ENST00000443720 1601 ntAPPRIS ALT2 TSL 1 (best) BASIC26.43■■□□□ 1.82
PTCRAQ6ISU1 RASL10A-202ENST00000401450 1720 ntTSL 2 BASIC26.42■■□□□ 1.82
PTCRAQ6ISU1 C16orf95-201ENST00000253461 953 ntAPPRIS P3 TSL 1 (best) BASIC26.42■■□□□ 1.82
PTCRAQ6ISU1 SPCS2P3-201ENST00000500401 656 ntBASIC26.42■■□□□ 1.82
PTCRAQ6ISU1 IGFBP7-201ENST00000295666 1427 ntAPPRIS P3 TSL 1 (best) BASIC26.41■■□□□ 1.82
PTCRAQ6ISU1 DHRS13-203ENST00000426464 1569 ntTSL 2 BASIC26.41■■□□□ 1.82
PTCRAQ6ISU1 ZFAND2B-201ENST00000289528 1314 ntAPPRIS P1 TSL 1 (best) BASIC26.4■■□□□ 1.82
PTCRAQ6ISU1 RAD51-208ENST00000532743 1515 ntTSL 2 BASIC26.4■■□□□ 1.82
PTCRAQ6ISU1 PPP4C-201ENST00000279387 1407 ntAPPRIS P1 TSL 1 (best) BASIC26.39■■□□□ 1.82
PTCRAQ6ISU1 AC092647.5-201ENST00000426595 1732 ntAPPRIS P1 TSL 5 BASIC26.39■■□□□ 1.82
PTCRAQ6ISU1 GATA6-202ENST00000581694 2057 ntAPPRIS P1 TSL 1 (best) BASIC26.39■■□□□ 1.82
Retrieved 100 of 98,524 protein–RNA pairs in 73.7 ms