Protein–RNA interactions for Protein: Q63HN8

RNF213, E3 ubiquitin-protein ligase RNF213, humanhuman

Predictions only

Length 5,207 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF213Q63HN8 ECEL1P2-201ENST00000461596 1295 ntBASIC13.93□□□□□ -0.18
RNF213Q63HN8 CDKN2A-207ENST00000497750 565 ntTSL 4 BASIC13.93□□□□□ -0.18
RNF213Q63HN8 GPRC5B-202ENST00000535671 1215 ntAPPRIS ALT2 TSL 1 (best) BASIC13.93□□□□□ -0.18
RNF213Q63HN8 CDKN2A-212ENST00000578845 678 ntTSL 2 BASIC13.93□□□□□ -0.18
RNF213Q63HN8 AL590094.1-201ENST00000635581 706 ntTSL 2 BASIC13.93□□□□□ -0.18
RNF213Q63HN8 PRMT5-228ENST00000627278 129 ntTSL 5 BASIC13.93□□□□□ -0.18
RNF213Q63HN8 CDKN2A-208ENST00000498124 880 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
RNF213Q63HN8 TBX2-AS1-202ENST00000589814 539 ntTSL 3 BASIC13.93□□□□□ -0.18
RNF213Q63HN8 AL031848.2-201ENST00000607670 837 ntBASIC13.93□□□□□ -0.18
RNF213Q63HN8 CTAG1B-202ENST00000359887 998 ntTSL 2 BASIC13.92□□□□□ -0.18
RNF213Q63HN8 MIR5787-201ENST00000611784 55 ntBASIC13.92□□□□□ -0.18
RNF213Q63HN8 ABHD17A-201ENST00000250974 1630 ntTSL 1 (best) BASIC13.92□□□□□ -0.18
RNF213Q63HN8 ADAT3-201ENST00000329478 1620 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
RNF213Q63HN8 C9orf50-201ENST00000372478 1620 ntAPPRIS P2 TSL 2 BASIC13.92□□□□□ -0.18
RNF213Q63HN8 IGFBPL1-201ENST00000377694 1093 ntAPPRIS P1 TSL 2 BASIC13.92□□□□□ -0.18
RNF213Q63HN8 CDKN2A-214ENST00000579755 1283 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
RNF213Q63HN8 P2RX2-202ENST00000348800 1222 ntAPPRIS ALT2 TSL 1 (best) BASIC13.91□□□□□ -0.18
RNF213Q63HN8 P2RX2-204ENST00000351222 1140 ntTSL 1 (best) BASIC13.91□□□□□ -0.18
RNF213Q63HN8 P2RX2-205ENST00000352418 1200 ntTSL 1 (best) BASIC13.91□□□□□ -0.18
RNF213Q63HN8 P2RX2-207ENST00000449132 1113 ntTSL 1 (best) BASIC13.91□□□□□ -0.18
RNF213Q63HN8 AL157400.5-201ENST00000507624 621 ntBASIC13.91□□□□□ -0.18
RNF213Q63HN8 MED25-210ENST00000612854 801 ntTSL 5 BASIC13.91□□□□□ -0.18
RNF213Q63HN8 MED25-213ENST00000620467 1293 ntTSL 1 (best) BASIC13.91□□□□□ -0.18
RNF213Q63HN8 MED25-214ENST00000622402 642 ntTSL 5 BASIC13.91□□□□□ -0.18
RNF213Q63HN8 GKAP1-202ENST00000376365 1511 ntTSL 1 (best) BASIC13.91□□□□□ -0.18
RNF213Q63HN8 PRR7-204ENST00000510492 1285 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
RNF213Q63HN8 CARD19-201ENST00000375464 855 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
RNF213Q63HN8 GSR-205ENST00000541648 1410 ntTSL 1 (best) BASIC13.91□□□□□ -0.18
RNF213Q63HN8 SOD3-201ENST00000382120 1526 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
RNF213Q63HN8 MAZ-208ENST00000563402 1461 ntTSL 5 BASIC13.91□□□□□ -0.18
RNF213Q63HN8 MAZ-210ENST00000566906 1455 ntTSL 5 BASIC13.91□□□□□ -0.18
RNF213Q63HN8 EBPL-204ENST00000378272 766 ntTSL 3 BASIC13.91□□□□□ -0.18
RNF213Q63HN8 EBPL-205ENST00000378284 967 ntTSL 1 (best) BASIC13.91□□□□□ -0.18
RNF213Q63HN8 SMKR1-201ENST00000462322 1035 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
RNF213Q63HN8 RNF146-205ENST00000477776 762 ntTSL 3 BASIC13.91□□□□□ -0.18
RNF213Q63HN8 SSBP4-202ENST00000348495 1721 ntAPPRIS ALT1 TSL 2 BASIC13.9□□□□□ -0.18
RNF213Q63HN8 C14orf80-202ENST00000334656 1358 ntAPPRIS ALT2 TSL 2 BASIC13.9□□□□□ -0.18
RNF213Q63HN8 MOB2-207ENST00000614710 705 ntTSL 5 BASIC13.9□□□□□ -0.18
RNF213Q63HN8 CLEC11A-201ENST00000250340 1419 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
RNF213Q63HN8 BTBD19-203ENST00000450269 1572 ntAPPRIS P1 TSL 5 BASIC13.9□□□□□ -0.18
RNF213Q63HN8 NOG-201ENST00000332822 1892 ntAPPRIS P1 BASIC13.9□□□□□ -0.18
RNF213Q63HN8 HAGHL-205ENST00000561546 1041 ntTSL 2 BASIC13.9□□□□□ -0.18
RNF213Q63HN8 AGAP1-204ENST00000409457 2165 ntTSL 1 (best) BASIC13.9□□□□□ -0.19
RNF213Q63HN8 AL357078.1-201ENST00000448344 310 ntTSL 4 BASIC13.89□□□□□ -0.19
RNF213Q63HN8 KCTD15-206ENST00000588881 1211 ntAPPRIS P1 TSL 2 BASIC13.89□□□□□ -0.19
RNF213Q63HN8 AC090192.1-201ENST00000517740 490 ntBASIC13.89□□□□□ -0.19
RNF213Q63HN8 TUBBP5-204ENST00000635438 565 ntTSL 4 BASIC13.89□□□□□ -0.19
RNF213Q63HN8 AC064853.4-201ENST00000641394 363 ntAPPRIS P1 BASIC13.89□□□□□ -0.19
RNF213Q63HN8 JMJD8-202ENST00000562111 823 ntTSL 2 BASIC13.88□□□□□ -0.19
RNF213Q63HN8 LSM6-202ENST00000502781 1352 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
RNF213Q63HN8 C4orf36-201ENST00000295898 881 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
RNF213Q63HN8 AC135279.3-201ENST00000610945 1311 ntBASIC13.88□□□□□ -0.19
RNF213Q63HN8 MAST4-206ENST00000406374 1066 ntTSL 1 (best) BASIC13.88□□□□□ -0.19
RNF213Q63HN8 UBE2D2-205ENST00000505548 1113 ntTSL 1 (best) BASIC13.88□□□□□ -0.19
RNF213Q63HN8 C11orf96-201ENST00000339446 1308 ntTSL 5 BASIC13.88□□□□□ -0.19
RNF213Q63HN8 AC103702.2-201ENST00000433510 1270 ntTSL 2 BASIC13.87□□□□□ -0.19
RNF213Q63HN8 FAM173A-207ENST00000569529 1052 ntAPPRIS P3 TSL 1 (best) BASIC13.87□□□□□ -0.19
RNF213Q63HN8 PCGF3-202ENST00000400151 1175 ntTSL 2 BASIC13.87□□□□□ -0.19
RNF213Q63HN8 PCMT1-201ENST00000367378 1293 ntAPPRIS P3 TSL 1 (best) BASIC13.87□□□□□ -0.19
RNF213Q63HN8 ESRRAP2-201ENST00000418437 1549 ntBASIC13.87□□□□□ -0.19
RNF213Q63HN8 PCYT2-206ENST00000571105 1628 ntTSL 5 BASIC13.87□□□□□ -0.19
RNF213Q63HN8 C16orf52-207ENST00000569656 1257 ntTSL 5 BASIC13.87□□□□□ -0.19
RNF213Q63HN8 CREM-229ENST00000474362 1030 ntTSL 2 BASIC13.86□□□□□ -0.19
RNF213Q63HN8 AC148477.6-201ENST00000623746 465 ntBASIC13.86□□□□□ -0.19
RNF213Q63HN8 CPNE1-203ENST00000397442 1695 ntTSL 5 BASIC13.86□□□□□ -0.19
RNF213Q63HN8 UBE2E3-213ENST00000602959 909 ntAPPRIS P1 TSL 5 BASIC13.86□□□□□ -0.19
RNF213Q63HN8 BARX1-201ENST00000253968 1533 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
RNF213Q63HN8 CD63-201ENST00000257857 1070 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
RNF213Q63HN8 SUMF1-205ENST00000458465 1102 ntTSL 2 BASIC13.86□□□□□ -0.19
RNF213Q63HN8 ADRA2C-201ENST00000330055 2129 ntAPPRIS P1 BASIC13.86□□□□□ -0.19
RNF213Q63HN8 KLHDC9-203ENST00000392192 1333 ntTSL 1 (best) BASIC13.86□□□□□ -0.19
RNF213Q63HN8 PPP4C-214ENST00000627746 1301 ntTSL 5 BASIC13.86□□□□□ -0.19
RNF213Q63HN8 CDC34-201ENST00000215574 1471 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
RNF213Q63HN8 TAZ-216ENST00000613002 1485 ntTSL 1 (best) BASIC13.86□□□□□ -0.19
RNF213Q63HN8 DENND3-207ENST00000518347 850 ntTSL 2 BASIC13.86□□□□□ -0.19
RNF213Q63HN8 RPS2-210ENST00000530225 765 ntTSL 2 BASIC13.86□□□□□ -0.19
RNF213Q63HN8 AC074183.2-201ENST00000623112 922 ntBASIC13.86□□□□□ -0.19
RNF213Q63HN8 IZUMO4-202ENST00000395301 1021 ntAPPRIS ALT2 TSL 1 (best) BASIC13.85□□□□□ -0.19
RNF213Q63HN8 LINC00472-204ENST00000436803 667 ntTSL 5 BASIC13.85□□□□□ -0.19
RNF213Q63HN8 UBE2Q2P2-204ENST00000618775 648 ntTSL 1 (best) BASIC13.85□□□□□ -0.19
RNF213Q63HN8 LIN7B-202ENST00000391864 582 ntTSL 3 BASIC13.85□□□□□ -0.19
RNF213Q63HN8 MAST4-205ENST00000406039 717 ntTSL 1 (best) BASIC13.85□□□□□ -0.19
RNF213Q63HN8 FKBP1B-202ENST00000380991 1010 ntTSL 1 (best) BASIC13.85□□□□□ -0.19
RNF213Q63HN8 RPL27A-206ENST00000530022 878 ntTSL 1 (best) BASIC13.85□□□□□ -0.19
RNF213Q63HN8 AL445237.1-202ENST00000604581 425 ntTSL 5 BASIC13.85□□□□□ -0.19
RNF213Q63HN8 BOD1-202ENST00000311086 1562 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
RNF213Q63HN8 PTPA-210ENST00000414510 1153 ntTSL 1 (best) BASIC13.85□□□□□ -0.19
RNF213Q63HN8 AC110285.6-201ENST00000617652 491 ntBASIC13.85□□□□□ -0.19
RNF213Q63HN8 EPB41L4A-AS2-201ENST00000623705 1396 ntBASIC13.85□□□□□ -0.19
RNF213Q63HN8 GAL3ST3-203ENST00000527878 1599 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
RNF213Q63HN8 AC120057.4-201ENST00000624722 1615 ntBASIC13.84□□□□□ -0.19
RNF213Q63HN8 AC131281.2-201ENST00000520478 145 ntBASIC13.84□□□□□ -0.19
RNF213Q63HN8 AC133561.4-201ENST00000566112 224 ntBASIC13.84□□□□□ -0.19
RNF213Q63HN8 CFAP73-201ENST00000335621 1514 ntAPPRIS P1 TSL 5 BASIC13.84□□□□□ -0.19
RNF213Q63HN8 GATA4-207ENST00000532059 1459 ntAPPRIS ALT1 TSL 1 (best) BASIC13.84□□□□□ -0.19
RNF213Q63HN8 CBR3-201ENST00000290354 1169 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
RNF213Q63HN8 DRAP1-201ENST00000312515 989 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
RNF213Q63HN8 OSCAR-206ENST00000391760 629 ntTSL 2 BASIC13.83□□□□□ -0.2
RNF213Q63HN8 FGD5-AS1-204ENST00000430166 1184 ntTSL 2 BASIC13.83□□□□□ -0.2
RNF213Q63HN8 HOXC-AS1-201ENST00000505700 548 ntTSL 2 BASIC13.83□□□□□ -0.2
Retrieved 100 of 98,524 protein–RNA pairs in 16.5 ms