Protein–RNA interactions for Protein: P61009

SPCS3, Signal peptidase complex subunit 3, humanhuman

Predictions only

Length 180 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SPCS3P61009 KLC2-205ENST00000394078 1557 ntTSL 5 BASIC20.27■□□□□ 0.84
SPCS3P61009 ARL2-SNX15-201ENST00000301886 2392 ntAPPRIS P1 TSL 2 BASIC20.27■□□□□ 0.83
SPCS3P61009 ADSS-201ENST00000366535 2780 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
SPCS3P61009 APLP1-201ENST00000221891 2495 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
SPCS3P61009 RAP2A-201ENST00000245304 5487 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
SPCS3P61009 CHML-205ENST00000638160 705 ntTSL 3 BASIC20.26■□□□□ 0.83
SPCS3P61009 BIN1-210ENST00000393041 2272 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
SPCS3P61009 AC018358.1-201ENST00000631079 1402 ntBASIC20.26■□□□□ 0.83
SPCS3P61009 KLC1-225ENST00000557575 2188 ntTSL 5 BASIC20.25■□□□□ 0.83
SPCS3P61009 MZT2B-202ENST00000409255 769 ntAPPRIS ALT2 TSL 5 BASIC20.25■□□□□ 0.83
SPCS3P61009 TXNL4A-210ENST00000591711 669 ntTSL 2 BASIC20.25■□□□□ 0.83
SPCS3P61009 BBC3-204ENST00000449228 1827 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
SPCS3P61009 C14orf80-205ENST00000392523 1845 ntAPPRIS ALT2 TSL 1 (best) BASIC20.24■□□□□ 0.83
SPCS3P61009 AFDN-201ENST00000344191 5249 ntTSL 5 BASIC20.24■□□□□ 0.83
SPCS3P61009 KIAA2013-201ENST00000376572 2815 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
SPCS3P61009 LTK-203ENST00000453182 2412 ntTSL 2 BASIC20.24■□□□□ 0.83
SPCS3P61009 AKAP17A-202ENST00000381261 2187 ntAPPRIS ALT2 TSL 1 (best) BASIC20.24■□□□□ 0.83
SPCS3P61009 DNMT3A-206ENST00000406659 1775 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
SPCS3P61009 PRR35-201ENST00000409413 2216 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
SPCS3P61009 TMEM64-201ENST00000418210 4663 ntTSL 2 BASIC20.23■□□□□ 0.83
SPCS3P61009 HSD11B1L-202ENST00000339423 1660 ntAPPRIS P3 TSL 1 (best) BASIC20.23■□□□□ 0.83
SPCS3P61009 FSD1-201ENST00000221856 1831 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
SPCS3P61009 CDPF1-201ENST00000314567 1875 ntAPPRIS P2 TSL 1 (best) BASIC20.23■□□□□ 0.83
SPCS3P61009 GFRA4-202ENST00000319242 900 ntAPPRIS P4 TSL 1 (best) BASIC20.23■□□□□ 0.83
SPCS3P61009 AC135983.2-203ENST00000454486 1613 ntBASIC20.23■□□□□ 0.83
SPCS3P61009 GTF2IP1-204ENST00000616377 2632 ntTSL 2 BASIC20.23■□□□□ 0.83
SPCS3P61009 PLBD2-202ENST00000545182 2321 ntTSL 2 BASIC20.22■□□□□ 0.83
SPCS3P61009 UNCX-201ENST00000316333 2048 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
SPCS3P61009 CRIM1-201ENST00000280527 5912 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
SPCS3P61009 C16orf59-202ENST00000483320 1709 ntAPPRIS ALT2 TSL 2 BASIC20.22■□□□□ 0.83
SPCS3P61009 D2HGDH-203ENST00000403782 2208 ntTSL 2 BASIC20.22■□□□□ 0.83
SPCS3P61009 RUNX2-203ENST00000371436 1588 ntAPPRIS ALT2 TSL 5 BASIC20.22■□□□□ 0.83
SPCS3P61009 FGF19-201ENST00000294312 2447 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
SPCS3P61009 MORF4L1-202ENST00000379535 2274 ntTSL 2 BASIC20.22■□□□□ 0.83
SPCS3P61009 H2AFV-205ENST00000381124 628 ntTSL 3 BASIC20.22■□□□□ 0.83
SPCS3P61009 TERF2-207ENST00000567296 1129 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
SPCS3P61009 UBE2S-203ENST00000589978 496 ntTSL 5 BASIC20.22■□□□□ 0.83
SPCS3P61009 FBXL8-206ENST00000519917 1460 ntAPPRIS P1 TSL 5 BASIC20.22■□□□□ 0.83
SPCS3P61009 ZDHHC16-207ENST00000393760 2014 ntAPPRIS P4 TSL 1 (best) BASIC20.22■□□□□ 0.83
SPCS3P61009 MSANTD2-201ENST00000239614 2495 ntTSL 2 BASIC20.21■□□□□ 0.83
SPCS3P61009 NXPH4-201ENST00000349394 1804 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
SPCS3P61009 SYT7-203ENST00000539008 2061 ntTSL 5 BASIC20.21■□□□□ 0.83
SPCS3P61009 DEDD-212ENST00000545495 2329 ntAPPRIS P1 TSL 3 BASIC20.21■□□□□ 0.83
SPCS3P61009 NRARP-201ENST00000356628 1770 ntAPPRIS P1 BASIC20.21■□□□□ 0.83
SPCS3P61009 RAD21-AS1-201ENST00000521487 2010 ntTSL 1 (best) BASIC20.2■□□□□ 0.83
SPCS3P61009 FAM120AOS-202ENST00000423591 1800 ntAPPRIS ALT2 TSL 1 (best) BASIC20.2■□□□□ 0.82
SPCS3P61009 NRBF2-202ENST00000435510 1816 ntTSL 2 BASIC20.2■□□□□ 0.82
SPCS3P61009 GTF3C4-202ENST00000483873 1417 ntTSL 3 BASIC20.2■□□□□ 0.82
SPCS3P61009 HIST2H3C-201ENST00000369158 1656 ntAPPRIS P1 BASIC20.2■□□□□ 0.82
SPCS3P61009 HIST2H3A-201ENST00000403683 1656 ntAPPRIS P1 BASIC20.2■□□□□ 0.82
SPCS3P61009 AC092755.2-201ENST00000560199 402 ntTSL 3 BASIC20.2■□□□□ 0.82
SPCS3P61009 LCNL1-201ENST00000408973 1839 ntAPPRIS P1 TSL 2 BASIC20.2■□□□□ 0.82
SPCS3P61009 ZNF692-201ENST00000306601 1931 ntAPPRIS P3 TSL 1 (best) BASIC20.19■□□□□ 0.82
SPCS3P61009 SLC9A3-201ENST00000264938 2584 ntAPPRIS P3 TSL 1 (best) BASIC20.19■□□□□ 0.82
SPCS3P61009 TOP1MT-208ENST00000519148 1868 ntTSL 2 BASIC20.19■□□□□ 0.82
SPCS3P61009 PRKAR1B-203ENST00000403562 1917 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
SPCS3P61009 GPS1-204ENST00000392358 2276 ntTSL 1 (best) BASIC20.19■□□□□ 0.82
SPCS3P61009 CFAP99-207ENST00000635017 2298 ntTSL 5 BASIC20.18■□□□□ 0.82
SPCS3P61009 POLR1D-201ENST00000302979 1166 ntAPPRIS P2 TSL 1 (best) BASIC20.18■□□□□ 0.82
SPCS3P61009 PSMG4-202ENST00000380305 489 ntTSL 5 BASIC20.18■□□□□ 0.82
SPCS3P61009 JMJD8-202ENST00000562111 823 ntTSL 2 BASIC20.18■□□□□ 0.82
SPCS3P61009 TSEN34-203ENST00000396388 1349 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
SPCS3P61009 DSG2-201ENST00000261590 5831 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
SPCS3P61009 RCC1L-205ENST00000618035 1409 ntTSL 1 (best) BASIC20.17■□□□□ 0.82
SPCS3P61009 C8orf58-202ENST00000409586 2021 ntAPPRIS ALT2 TSL 2 BASIC20.17■□□□□ 0.82
SPCS3P61009 SYT12-205ENST00000527043 1661 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
SPCS3P61009 SNX15-202ENST00000377244 1939 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
SPCS3P61009 AL449106.1-201ENST00000608517 1980 ntBASIC20.16■□□□□ 0.82
SPCS3P61009 ST7-201ENST00000265437 2899 ntTSL 1 (best) BASIC20.16■□□□□ 0.82
SPCS3P61009 HTRA1-201ENST00000368984 2120 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
SPCS3P61009 IRAK1-205ENST00000429936 2127 ntTSL 5 BASIC20.16■□□□□ 0.82
SPCS3P61009 AC108673.1-201ENST00000510422 1159 ntBASIC20.16■□□□□ 0.82
SPCS3P61009 AC005559.1-201ENST00000589661 871 ntBASIC20.16■□□□□ 0.82
SPCS3P61009 PCSK6-218ENST00000619160 3093 ntAPPRIS ALT2 TSL 1 (best) BASIC20.16■□□□□ 0.82
SPCS3P61009 FAM189B-210ENST00000621094 1335 ntTSL 1 (best) BASIC20.16■□□□□ 0.82
SPCS3P61009 ETS1-201ENST00000319397 2231 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
SPCS3P61009 MAPK8IP1P1-201ENST00000574657 1439 ntBASIC20.16■□□□□ 0.82
SPCS3P61009 EI24-212ENST00000615917 1407 ntTSL 2 BASIC20.16■□□□□ 0.82
SPCS3P61009 LYPD6B-203ENST00000409642 1577 ntAPPRIS P3 TSL 1 (best) BASIC20.16■□□□□ 0.82
SPCS3P61009 VRK2-202ENST00000412104 1916 ntTSL 1 (best) BASIC20.15■□□□□ 0.82
SPCS3P61009 AC009690.3-201ENST00000569547 1902 ntAPPRIS P1 TSL 2 BASIC20.15■□□□□ 0.82
SPCS3P61009 INAFM1-201ENST00000552360 1255 ntAPPRIS P1 BASIC20.15■□□□□ 0.82
SPCS3P61009 DTNBP1-202ENST00000344537 1403 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
SPCS3P61009 GKAP1-202ENST00000376365 1511 ntTSL 1 (best) BASIC20.15■□□□□ 0.82
SPCS3P61009 SMDT1-201ENST00000331479 1567 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
SPCS3P61009 WHAMMP2-203ENST00000563942 1603 ntBASIC20.15■□□□□ 0.82
SPCS3P61009 MARCKSL1-201ENST00000329421 1699 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
SPCS3P61009 DAZAP1-202ENST00000336761 2290 ntTSL 5 BASIC20.15■□□□□ 0.82
SPCS3P61009 PPP1R26-201ENST00000356818 4932 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.82
SPCS3P61009 PTPA-202ENST00000347048 1989 ntTSL 1 (best) BASIC20.14■□□□□ 0.81
SPCS3P61009 POU2F2-208ENST00000529952 1716 ntAPPRIS ALT2 TSL 1 (best) BASIC20.14■□□□□ 0.81
SPCS3P61009 NAA50-207ENST00000493900 962 ntAPPRIS ALT1 TSL 2 BASIC20.14■□□□□ 0.81
SPCS3P61009 C16orf72-201ENST00000327827 5953 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
SPCS3P61009 TARBP1-201ENST00000040877 5130 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
SPCS3P61009 ANKRD53-201ENST00000272421 2185 ntAPPRIS P3 TSL 1 (best) BASIC20.14■□□□□ 0.81
SPCS3P61009 ANKRD53-203ENST00000441349 1797 ntTSL 5 BASIC20.13■□□□□ 0.81
SPCS3P61009 SPTSSA-201ENST00000298130 2777 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
SPCS3P61009 ZNF653-201ENST00000293771 2240 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
SPCS3P61009 GPR150-201ENST00000380007 2065 ntAPPRIS P1 BASIC20.13■□□□□ 0.81
SPCS3P61009 AC091060.1-201ENST00000623524 1766 ntBASIC20.13■□□□□ 0.81
Retrieved 100 of 98,524 protein–RNA pairs in 26.4 ms