Protein–RNA interactions for Protein: P56749

CLDN12, Claudin-12, humanhuman

Predictions only

Length 244 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN12P56749 GATA4-209ENST00000622443 1982 ntTSL 5 BASIC21.78■■□□□ 1.08
CLDN12P56749 TSKU-201ENST00000333090 2712 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.08
CLDN12P56749 AC068152.1-210ENST00000574741 836 ntTSL 3 BASIC21.77■■□□□ 1.08
CLDN12P56749 MNX1-207ENST00000543409 1620 ntAPPRIS ALT2 TSL 1 (best) BASIC21.77■■□□□ 1.07
CLDN12P56749 NPAS3-203ENST00000357798 2763 ntAPPRIS ALT2 TSL 1 (best) BASIC21.76■■□□□ 1.07
CLDN12P56749 HSD11B1L-202ENST00000339423 1660 ntAPPRIS P3 TSL 1 (best) BASIC21.76■■□□□ 1.07
CLDN12P56749 GSR-206ENST00000546342 1482 ntAPPRIS ALT2 TSL 1 (best) BASIC21.76■■□□□ 1.07
CLDN12P56749 AL391121.1-201ENST00000607967 1349 ntBASIC21.76■■□□□ 1.07
CLDN12P56749 BIN1-210ENST00000393041 2272 ntTSL 1 (best) BASIC21.76■■□□□ 1.07
CLDN12P56749 C8orf58-206ENST00000614574 1955 ntAPPRIS ALT2 TSL 5 BASIC21.76■■□□□ 1.07
CLDN12P56749 MAP3K3-210ENST00000584573 2480 ntTSL 1 (best) BASIC21.75■■□□□ 1.07
CLDN12P56749 LYPLA1-215ENST00000618914 2482 ntTSL 5 BASIC21.75■■□□□ 1.07
CLDN12P56749 POU2F2-208ENST00000529952 1716 ntAPPRIS ALT2 TSL 1 (best) BASIC21.75■■□□□ 1.07
CLDN12P56749 SNX5-201ENST00000377759 2270 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
CLDN12P56749 AC020928.2-201ENST00000588717 2197 ntBASIC21.75■■□□□ 1.07
CLDN12P56749 MKRN1-202ENST00000443720 1601 ntAPPRIS ALT2 TSL 1 (best) BASIC21.74■■□□□ 1.07
CLDN12P56749 NMB-202ENST00000394588 1017 ntTSL 1 (best) BASIC21.74■■□□□ 1.07
CLDN12P56749 ANKS3-203ENST00000450067 2272 ntTSL 5 BASIC21.74■■□□□ 1.07
CLDN12P56749 PICALM-224ENST00000630913 2261 ntTSL 5 BASIC21.74■■□□□ 1.07
CLDN12P56749 MAZ-205ENST00000562337 1574 ntTSL 3 BASIC21.74■■□□□ 1.07
CLDN12P56749 GCLC-209ENST00000514004 2356 ntTSL 1 (best) BASIC21.73■■□□□ 1.07
CLDN12P56749 AC009690.3-201ENST00000569547 1902 ntAPPRIS P1 TSL 2 BASIC21.73■■□□□ 1.07
CLDN12P56749 DNAH9-209ENST00000579828 1986 ntTSL 2 BASIC21.73■■□□□ 1.07
CLDN12P56749 PINK1-201ENST00000321556 2660 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
CLDN12P56749 RASL10A-202ENST00000401450 1720 ntTSL 2 BASIC21.72■■□□□ 1.07
CLDN12P56749 LFNG-203ENST00000359574 1377 ntAPPRIS ALT1 TSL 1 (best) BASIC21.72■■□□□ 1.07
CLDN12P56749 AC145676.1-201ENST00000514988 2004 ntBASIC21.71■■□□□ 1.07
CLDN12P56749 FAM120AOS-202ENST00000423591 1800 ntAPPRIS ALT2 TSL 1 (best) BASIC21.71■■□□□ 1.07
CLDN12P56749 ALG2-203ENST00000476832 1880 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
CLDN12P56749 CDK9-201ENST00000373264 2463 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
CLDN12P56749 CNNM2-201ENST00000369875 2059 ntTSL 1 (best) BASIC21.7■■□□□ 1.06
CLDN12P56749 BTBD6-204ENST00000463376 2195 ntAPPRIS ALT2 TSL 2 BASIC21.7■■□□□ 1.06
CLDN12P56749 SNX15-202ENST00000377244 1939 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
CLDN12P56749 AC018358.1-201ENST00000631079 1402 ntBASIC21.7■■□□□ 1.06
CLDN12P56749 PPM1B-202ENST00000345249 1713 ntTSL 1 (best) BASIC21.69■■□□□ 1.06
CLDN12P56749 SCX-201ENST00000567180 999 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
CLDN12P56749 CAHM-201ENST00000604200 896 ntBASIC21.69■■□□□ 1.06
CLDN12P56749 RNF19B-202ENST00000356990 2598 ntTSL 1 (best) BASIC21.69■■□□□ 1.06
CLDN12P56749 HIST2H3C-201ENST00000369158 1656 ntAPPRIS P1 BASIC21.69■■□□□ 1.06
CLDN12P56749 HIST2H3A-201ENST00000403683 1656 ntAPPRIS P1 BASIC21.69■■□□□ 1.06
CLDN12P56749 PPP1R26-201ENST00000356818 4932 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
CLDN12P56749 AMIGO1-201ENST00000369862 2229 ntAPPRIS P1 TSL 5 BASIC21.68■■□□□ 1.06
CLDN12P56749 C14orf80-202ENST00000334656 1358 ntAPPRIS ALT2 TSL 2 BASIC21.68■■□□□ 1.06
CLDN12P56749 FBXL8-206ENST00000519917 1460 ntAPPRIS P1 TSL 5 BASIC21.68■■□□□ 1.06
CLDN12P56749 SP5-201ENST00000375281 2033 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
CLDN12P56749 PLEKHA8-201ENST00000258679 2293 ntTSL 1 (best) BASIC21.68■■□□□ 1.06
CLDN12P56749 TIGD3-201ENST00000309880 2012 ntAPPRIS P1 TSL 2 BASIC21.67■■□□□ 1.06
CLDN12P56749 DLX2-202ENST00000466293 1852 ntTSL 2 BASIC21.67■■□□□ 1.06
CLDN12P56749 HOXB3-211ENST00000490677 1109 ntTSL 1 (best) BASIC21.67■■□□□ 1.06
CLDN12P56749 AP000547.3-202ENST00000592107 1019 ntTSL 1 (best) BASIC21.67■■□□□ 1.06
CLDN12P56749 VEGFA-231ENST00000640499 1188 ntAPPRIS P3 TSL 1 (best) BASIC21.67■■□□□ 1.06
CLDN12P56749 CDC16-211ENST00000628084 2058 ntTSL 5 BASIC21.67■■□□□ 1.06
CLDN12P56749 ANKRD53-203ENST00000441349 1797 ntTSL 5 BASIC21.66■■□□□ 1.06
CLDN12P56749 PURG-202ENST00000475541 2875 ntAPPRIS P1 BASIC21.66■■□□□ 1.06
CLDN12P56749 ARMC10-208ENST00000441711 2524 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
CLDN12P56749 MEST-211ENST00000437945 1455 ntTSL 5 BASIC21.66■■□□□ 1.06
CLDN12P56749 VSIG8-201ENST00000368100 1818 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
CLDN12P56749 FGF3-201ENST00000334134 892 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
CLDN12P56749 C16orf59-202ENST00000483320 1709 ntAPPRIS ALT2 TSL 2 BASIC21.65■■□□□ 1.06
CLDN12P56749 HABP4-202ENST00000375251 2304 ntTSL 1 (best) BASIC21.64■■□□□ 1.06
CLDN12P56749 DUSP15-202ENST00000339738 1454 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.06
CLDN12P56749 OTUD5-201ENST00000156084 2740 ntAPPRIS P3 TSL 1 (best) BASIC21.64■■□□□ 1.06
CLDN12P56749 ETS1-201ENST00000319397 2231 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.06
CLDN12P56749 C19orf47-202ENST00000392035 2126 ntAPPRIS ALT2 TSL 1 (best) BASIC21.64■■□□□ 1.06
CLDN12P56749 KLC2-205ENST00000394078 1557 ntTSL 5 BASIC21.64■■□□□ 1.05
CLDN12P56749 LINC00588-201ENST00000521663 1875 ntTSL 2 BASIC21.64■■□□□ 1.05
CLDN12P56749 DDAH2-212ENST00000375789 1688 ntAPPRIS P1 TSL 2 BASIC21.63■■□□□ 1.05
CLDN12P56749 DDAH2-213ENST00000375792 1688 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
CLDN12P56749 SYT12-205ENST00000527043 1661 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
CLDN12P56749 BAMBI-201ENST00000375533 1877 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
CLDN12P56749 LRRC75B-201ENST00000318753 1238 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
CLDN12P56749 CEBPB-201ENST00000303004 1956 ntAPPRIS P1 BASIC21.63■■□□□ 1.05
CLDN12P56749 FEZ2-204ENST00000405912 1931 ntTSL 1 (best) BASIC21.63■■□□□ 1.05
CLDN12P56749 TMEM64-201ENST00000418210 4663 ntTSL 2 BASIC21.62■■□□□ 1.05
CLDN12P56749 DACT1-206ENST00000556859 2239 ntAPPRIS ALT2 TSL 2 BASIC21.62■■□□□ 1.05
CLDN12P56749 NADK2-210ENST00000514504 1233 ntTSL 5 BASIC21.62■■□□□ 1.05
CLDN12P56749 AC006486.1-201ENST00000594664 634 ntAPPRIS P1 TSL 3 BASIC21.62■■□□□ 1.05
CLDN12P56749 LANCL3-203ENST00000614025 1469 ntTSL 2 BASIC21.62■■□□□ 1.05
CLDN12P56749 MAD2L2-201ENST00000235310 1860 ntAPPRIS P1 TSL 2 BASIC21.62■■□□□ 1.05
CLDN12P56749 NKX2-1-204ENST00000522719 1417 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
CLDN12P56749 CYS1-201ENST00000381813 2738 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
CLDN12P56749 GATS-205ENST00000436886 2726 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
CLDN12P56749 AC135983.2-203ENST00000454486 1613 ntBASIC21.62■■□□□ 1.05
CLDN12P56749 CDC16-204ENST00000360383 2211 ntAPPRIS P3 TSL 5 BASIC21.61■■□□□ 1.05
CLDN12P56749 UBE2J2-202ENST00000349431 1733 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
CLDN12P56749 NRBF2-202ENST00000435510 1816 ntTSL 2 BASIC21.61■■□□□ 1.05
CLDN12P56749 IFFO2-203ENST00000455833 6188 ntAPPRIS P1 TSL 5 BASIC21.61■■□□□ 1.05
CLDN12P56749 F8A1-201ENST00000610495 1713 ntAPPRIS P1 BASIC21.6■■□□□ 1.05
CLDN12P56749 MEIS2-204ENST00000397620 2295 ntTSL 2 BASIC21.6■■□□□ 1.05
CLDN12P56749 TSPOAP1-AS1-205ENST00000580022 2337 ntTSL 2 BASIC21.6■■□□□ 1.05
CLDN12P56749 WHAMMP2-203ENST00000563942 1603 ntBASIC21.59■■□□□ 1.05
CLDN12P56749 TBC1D10A-201ENST00000215790 2077 ntAPPRIS P3 TSL 1 (best) BASIC21.59■■□□□ 1.05
CLDN12P56749 SNHG7-204ENST00000447221 2157 ntTSL 2 BASIC21.59■■□□□ 1.05
CLDN12P56749 MAZ-201ENST00000219782 2698 ntAPPRIS P4 TSL 1 (best) BASIC21.59■■□□□ 1.05
CLDN12P56749 ST6GALNAC2-201ENST00000225276 2170 ntAPPRIS P1 TSL 1 (best) BASIC21.58■■□□□ 1.05
CLDN12P56749 MYPOP-201ENST00000322217 1890 ntAPPRIS P1 TSL 1 (best) BASIC21.58■■□□□ 1.05
CLDN12P56749 HAS1-205ENST00000601714 2086 ntTSL 1 (best) BASIC21.58■■□□□ 1.05
CLDN12P56749 MEN1-204ENST00000377313 1871 ntAPPRIS P3 TSL 2 BASIC21.58■■□□□ 1.04
CLDN12P56749 PIM3-201ENST00000360612 2369 ntAPPRIS P1 TSL 1 (best) BASIC21.58■■□□□ 1.04
CLDN12P56749 SRR-201ENST00000344595 2728 ntAPPRIS P1 TSL 1 (best) BASIC21.57■■□□□ 1.04
Retrieved 100 of 98,524 protein–RNA pairs in 140.9 ms