Protein–RNA interactions for Protein: P52926

HMGA2, High mobility group protein HMGI-C, humanhuman

Predictions only

Length 109 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HMGA2P52926 PPM1B-202ENST00000345249 1713 ntTSL 1 (best) BASIC23.07■■□□□ 1.28
HMGA2P52926 TTBK2-207ENST00000567840 1961 ntTSL 1 (best) BASIC23.07■■□□□ 1.28
HMGA2P52926 RTN2-208ENST00000590526 2357 ntTSL 5 BASIC23.06■■□□□ 1.28
HMGA2P52926 DTNBP1-202ENST00000344537 1403 ntAPPRIS P1 TSL 1 (best) BASIC23.06■■□□□ 1.28
HMGA2P52926 FAM189B-210ENST00000621094 1335 ntTSL 1 (best) BASIC23.06■■□□□ 1.28
HMGA2P52926 AC145676.1-201ENST00000514988 2004 ntBASIC23.05■■□□□ 1.28
HMGA2P52926 AC092755.2-201ENST00000560199 402 ntTSL 3 BASIC23.05■■□□□ 1.28
HMGA2P52926 FEZ1-201ENST00000278919 1748 ntAPPRIS P1 TSL 1 (best) BASIC23.05■■□□□ 1.28
HMGA2P52926 DEAF1-201ENST00000382409 2500 ntAPPRIS P1 TSL 1 (best) BASIC23.05■■□□□ 1.28
HMGA2P52926 TIGD3-201ENST00000309880 2012 ntAPPRIS P1 TSL 2 BASIC23.04■■□□□ 1.28
HMGA2P52926 SLC15A3-201ENST00000227880 2115 ntAPPRIS P1 TSL 1 (best) BASIC23.04■■□□□ 1.28
HMGA2P52926 PSMG4-202ENST00000380305 489 ntTSL 5 BASIC23.04■■□□□ 1.28
HMGA2P52926 NELFB-202ENST00000634710 1887 ntAPPRIS P2 TSL 1 (best) BASIC23.04■■□□□ 1.28
HMGA2P52926 F8A1-201ENST00000610495 1713 ntAPPRIS P1 BASIC23.03■■□□□ 1.28
HMGA2P52926 MAPK8IP1P1-201ENST00000574657 1439 ntBASIC23.03■■□□□ 1.28
HMGA2P52926 GTF2IP1-204ENST00000616377 2632 ntTSL 2 BASIC23.03■■□□□ 1.28
HMGA2P52926 VSIG8-201ENST00000368100 1818 ntAPPRIS P1 TSL 1 (best) BASIC23.03■■□□□ 1.28
HMGA2P52926 LINC00273-201ENST00000539813 1452 ntBASIC23.02■■□□□ 1.28
HMGA2P52926 LINC00588-201ENST00000521663 1875 ntTSL 2 BASIC23.01■■□□□ 1.27
HMGA2P52926 INAFM1-201ENST00000552360 1255 ntAPPRIS P1 BASIC23.01■■□□□ 1.27
HMGA2P52926 NREP-202ENST00000379671 2581 ntAPPRIS P1 TSL 1 (best) BASIC23■■□□□ 1.27
HMGA2P52926 EI24-212ENST00000615917 1407 ntTSL 2 BASIC23■■□□□ 1.27
HMGA2P52926 RCE1-201ENST00000309657 1485 ntAPPRIS P1 TSL 1 (best) BASIC23■■□□□ 1.27
HMGA2P52926 ACSS1-202ENST00000376726 2244 ntTSL 2 BASIC23■■□□□ 1.27
HMGA2P52926 SETBP1-202ENST00000426838 1785 ntAPPRIS ALT2 TSL 1 (best) BASIC23■■□□□ 1.27
HMGA2P52926 NAA50-207ENST00000493900 962 ntAPPRIS ALT1 TSL 2 BASIC23■■□□□ 1.27
HMGA2P52926 AC108673.1-201ENST00000510422 1159 ntBASIC23■■□□□ 1.27
HMGA2P52926 DDAH2-212ENST00000375789 1688 ntAPPRIS P1 TSL 2 BASIC23■■□□□ 1.27
HMGA2P52926 DDAH2-213ENST00000375792 1688 ntAPPRIS P1 TSL 1 (best) BASIC23■■□□□ 1.27
HMGA2P52926 MORF4L1-202ENST00000379535 2274 ntTSL 2 BASIC22.99■■□□□ 1.27
HMGA2P52926 TMEM150A-202ENST00000334462 1518 ntAPPRIS P1 TSL 1 (best) BASIC22.99■■□□□ 1.27
HMGA2P52926 GKAP1-202ENST00000376365 1511 ntTSL 1 (best) BASIC22.99■■□□□ 1.27
HMGA2P52926 MEN1-204ENST00000377313 1871 ntAPPRIS P3 TSL 2 BASIC22.99■■□□□ 1.27
HMGA2P52926 ADAT3-201ENST00000329478 1620 ntAPPRIS P1 TSL 1 (best) BASIC22.99■■□□□ 1.27
HMGA2P52926 DNAH9-209ENST00000579828 1986 ntTSL 2 BASIC22.98■■□□□ 1.27
HMGA2P52926 MAD2L2-205ENST00000376669 864 ntTSL 3 BASIC22.98■■□□□ 1.27
HMGA2P52926 C19orf47-202ENST00000392035 2126 ntAPPRIS ALT2 TSL 1 (best) BASIC22.98■■□□□ 1.27
HMGA2P52926 AC005559.1-201ENST00000589661 871 ntBASIC22.98■■□□□ 1.27
HMGA2P52926 BAMBI-201ENST00000375533 1877 ntAPPRIS P1 TSL 1 (best) BASIC22.98■■□□□ 1.27
HMGA2P52926 DLX2-202ENST00000466293 1852 ntTSL 2 BASIC22.98■■□□□ 1.27
HMGA2P52926 CDC16-211ENST00000628084 2058 ntTSL 5 BASIC22.97■■□□□ 1.27
HMGA2P52926 UBALD2-203ENST00000589240 660 ntTSL 2 BASIC22.97■■□□□ 1.27
HMGA2P52926 CAPNS1-215ENST00000628018 1509 ntAPPRIS ALT2 TSL 5 BASIC22.97■■□□□ 1.27
HMGA2P52926 ACSS1-203ENST00000432802 2438 ntTSL 2 BASIC22.97■■□□□ 1.27
HMGA2P52926 HSF1-204ENST00000528838 2142 ntAPPRIS P1 TSL 1 (best) BASIC22.96■■□□□ 1.27
HMGA2P52926 KLF3-AS1-202ENST00000440181 2368 ntTSL 2 BASIC22.96■■□□□ 1.27
HMGA2P52926 SH3GL1-201ENST00000269886 2516 ntAPPRIS P1 TSL 1 (best) BASIC22.96■■□□□ 1.27
HMGA2P52926 EIF5A-202ENST00000336458 1511 ntAPPRIS P1 TSL 1 (best) BASIC22.95■■□□□ 1.26
HMGA2P52926 UBE2J2-202ENST00000349431 1733 ntAPPRIS P1 TSL 1 (best) BASIC22.95■■□□□ 1.26
HMGA2P52926 ST6GALNAC6-204ENST00000373144 2406 ntAPPRIS ALT1 TSL 1 (best) BASIC22.95■■□□□ 1.26
HMGA2P52926 ZNF470-206ENST00000601902 1640 ntTSL 1 (best) BASIC22.95■■□□□ 1.26
HMGA2P52926 PPP1R14C-201ENST00000361131 2152 ntAPPRIS P1 TSL 1 (best) BASIC22.94■■□□□ 1.26
HMGA2P52926 EMID1-202ENST00000404755 2049 ntTSL 5 BASIC22.94■■□□□ 1.26
HMGA2P52926 FEZ2-204ENST00000405912 1931 ntTSL 1 (best) BASIC22.94■■□□□ 1.26
HMGA2P52926 MIR6090-201ENST00000622481 60 ntBASIC22.94■■□□□ 1.26
HMGA2P52926 CNNM2-201ENST00000369875 2059 ntTSL 1 (best) BASIC22.94■■□□□ 1.26
HMGA2P52926 MYPOP-201ENST00000322217 1890 ntAPPRIS P1 TSL 1 (best) BASIC22.94■■□□□ 1.26
HMGA2P52926 MBOAT7-201ENST00000245615 2529 ntAPPRIS P1 TSL 1 (best) BASIC22.93■■□□□ 1.26
HMGA2P52926 BTBD6-204ENST00000463376 2195 ntAPPRIS ALT2 TSL 2 BASIC22.93■■□□□ 1.26
HMGA2P52926 PPP1R14B-201ENST00000309318 982 ntAPPRIS P1 TSL 1 (best) BASIC22.92■■□□□ 1.26
HMGA2P52926 BCAP31-201ENST00000345046 1589 ntAPPRIS P1 TSL 1 (best) BASIC22.92■■□□□ 1.26
HMGA2P52926 DUSP8P4-201ENST00000399538 1761 ntBASIC22.91■■□□□ 1.26
HMGA2P52926 LMO1-202ENST00000428101 1038 ntAPPRIS ALT1 TSL 1 (best) BASIC22.91■■□□□ 1.26
HMGA2P52926 ESRRA-203ENST00000406310 2218 ntAPPRIS ALT1 TSL 1 (best) BASIC22.91■■□□□ 1.26
HMGA2P52926 SP5-201ENST00000375281 2033 ntAPPRIS P1 TSL 1 (best) BASIC22.91■■□□□ 1.26
HMGA2P52926 DDX42-201ENST00000359353 2783 ntTSL 5 BASIC22.9■■□□□ 1.26
HMGA2P52926 AC020928.2-201ENST00000588717 2197 ntBASIC22.9■■□□□ 1.26
HMGA2P52926 HNRNPLP2-201ENST00000568980 1570 ntBASIC22.9■■□□□ 1.26
HMGA2P52926 RNF175-201ENST00000347063 1604 ntAPPRIS P1 TSL 1 (best) BASIC22.9■■□□□ 1.26
HMGA2P52926 SNX5-201ENST00000377759 2270 ntAPPRIS P1 TSL 1 (best) BASIC22.89■■□□□ 1.26
HMGA2P52926 OVOL2-201ENST00000278780 1555 ntAPPRIS P1 TSL 1 (best) BASIC22.89■■□□□ 1.26
HMGA2P52926 PCYT2-202ENST00000538721 1765 ntAPPRIS P1 TSL 1 (best) BASIC22.89■■□□□ 1.26
HMGA2P52926 DCUN1D5-201ENST00000260247 1337 ntAPPRIS P1 TSL 1 (best) BASIC22.89■■□□□ 1.26
HMGA2P52926 C8orf58-206ENST00000614574 1955 ntAPPRIS ALT2 TSL 5 BASIC22.89■■□□□ 1.26
HMGA2P52926 CCND3-202ENST00000372988 2133 ntTSL 1 (best) BASIC22.89■■□□□ 1.25
HMGA2P52926 ECI1-203ENST00000562238 948 ntTSL 1 (best) BASIC22.89■■□□□ 1.25
HMGA2P52926 CLPTM1L-201ENST00000320895 2500 ntAPPRIS P1 TSL 1 (best) BASIC22.89■■□□□ 1.25
HMGA2P52926 ANKS3-203ENST00000450067 2272 ntTSL 5 BASIC22.88■■□□□ 1.25
HMGA2P52926 MARCH2-202ENST00000381035 1192 ntTSL 5 BASIC22.88■■□□□ 1.25
HMGA2P52926 AC092803.2-201ENST00000564287 1899 ntBASIC22.88■■□□□ 1.25
HMGA2P52926 SKOR2-203ENST00000620245 3048 ntAPPRIS ALT2 TSL 5 BASIC22.87■■□□□ 1.25
HMGA2P52926 ANKRD16-201ENST00000191063 1567 ntTSL 3 BASIC22.87■■□□□ 1.25
HMGA2P52926 MAD2L2-201ENST00000235310 1860 ntAPPRIS P1 TSL 2 BASIC22.87■■□□□ 1.25
HMGA2P52926 PCSK6-216ENST00000615296 2921 ntTSL 5 BASIC22.87■■□□□ 1.25
HMGA2P52926 MAZ-202ENST00000322945 2532 ntAPPRIS ALT2 TSL 1 (best) BASIC22.86■■□□□ 1.25
HMGA2P52926 CTBP2-211ENST00000494626 2014 ntAPPRIS P1 TSL 1 (best) BASIC22.86■■□□□ 1.25
HMGA2P52926 TCEA2-202ENST00000343484 1235 ntAPPRIS P1 TSL 1 (best) BASIC22.86■■□□□ 1.25
HMGA2P52926 ARTN-204ENST00000438616 889 ntTSL 1 (best) BASIC22.86■■□□□ 1.25
HMGA2P52926 HOPX-206ENST00000503639 1248 ntAPPRIS P1 TSL 1 (best) BASIC22.86■■□□□ 1.25
HMGA2P52926 SUZ12P1-203ENST00000578195 985 ntBASIC22.86■■□□□ 1.25
HMGA2P52926 GTPBP3-202ENST00000358792 1951 ntAPPRIS P4 TSL 2 BASIC22.86■■□□□ 1.25
HMGA2P52926 FBXL8-201ENST00000258200 1658 ntAPPRIS P1 TSL 1 (best) BASIC22.86■■□□□ 1.25
HMGA2P52926 SSBP3-202ENST00000357475 1533 ntTSL 1 (best) BASIC22.86■■□□□ 1.25
HMGA2P52926 PICALM-224ENST00000630913 2261 ntTSL 5 BASIC22.85■■□□□ 1.25
HMGA2P52926 AP004609.3-201ENST00000610705 1884 ntBASIC22.85■■□□□ 1.25
HMGA2P52926 CEBPB-201ENST00000303004 1956 ntAPPRIS P1 BASIC22.85■■□□□ 1.25
HMGA2P52926 BICDL2-203ENST00000572449 1984 ntAPPRIS P1 TSL 5 BASIC22.84■■□□□ 1.25
HMGA2P52926 NTN3-201ENST00000293973 1986 ntAPPRIS P1 TSL 1 (best) BASIC22.83■■□□□ 1.25
HMGA2P52926 CSNK1E-203ENST00000396832 2791 ntAPPRIS P1 TSL 1 (best) BASIC22.83■■□□□ 1.25
HMGA2P52926 AC004837.3-201ENST00000420748 565 ntTSL 4 BASIC22.83■■□□□ 1.25
Retrieved 100 of 98,524 protein–RNA pairs in 47.1 ms