Protein–RNA interactions for Protein: P48412

UPF3, Nonsense-mediated mRNA decay protein 3, yeastyeast

Known RBP Predictions only

Length 387 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
UPF3P48412 GRH1YDR517W 1119 nt7.33□□□□□ -1.24
UPF3P48412 TAD2YJL035C 753 nt7.33□□□□□ -1.24
UPF3P48412 YHR033WYHR033W 1272 nt7.32□□□□□ -1.24
UPF3P48412 SPE4YLR146C 903 nt7.32□□□□□ -1.24
UPF3P48412 SNF7YLR025W 723 nt7.31□□□□□ -1.24
UPF3P48412 RCF2YNR018W 675 nt7.31□□□□□ -1.24
UPF3P48412 YBR226CYBR226C 411 nt7.31□□□□□ -1.24
UPF3P48412 RBS1YDL189W 1374 nt7.31□□□□□ -1.24
UPF3P48412 ELP4YPL101W 1371 nt7.31□□□□□ -1.24
UPF3P48412 CIR2YOR356W 1896 nt7.3□□□□□ -1.24
UPF3P48412 PET10YKR046C 852 nt7.3□□□□□ -1.24
UPF3P48412 YLR030WYLR030W 792 nt7.3□□□□□ -1.24
UPF3P48412 TDH1YJL052W 999 nt7.29□□□□□ -1.24
UPF3P48412 SNA3YJL151C 402 nt7.29□□□□□ -1.24
UPF3P48412 YOR343CYOR343C 327 nt7.29□□□□□ -1.24
UPF3P48412 LEO1YOR123C 1395 nt7.28□□□□□ -1.24
UPF3P48412 YDR215CYDR215C 414 nt7.27□□□□□ -1.25
UPF3P48412 GNA1YFL017C 480 nt7.27□□□□□ -1.25
UPF3P48412 HRA1HRA1 564 nt7.27□□□□□ -1.25
UPF3P48412 CRN1YLR429W 1956 nt7.26□□□□□ -1.25
UPF3P48412 YIL168WYIL168W 384 nt7.26□□□□□ -1.25
UPF3P48412 VPS65YLR322W 315 nt7.26□□□□□ -1.25
UPF3P48412 MSB3YNL293W 1902 nt7.25□□□□□ -1.25
UPF3P48412 ADE1YAR015W 921 nt7.25□□□□□ -1.25
UPF3P48412 MAL31YBR298C 1845 nt7.24□□□□□ -1.25
UPF3P48412 YBL113CYBL113C 2379 nt7.24□□□□□ -1.25
UPF3P48412 CHA1YCL064C 1083 nt7.24□□□□□ -1.25
UPF3P48412 BUD20YLR074C 501 nt7.24□□□□□ -1.25
UPF3P48412 HXT13YEL069C 1695 nt7.24□□□□□ -1.25
UPF3P48412 ATP10YLR393W 840 nt7.23□□□□□ -1.25
UPF3P48412 CAR2YLR438W 1275 nt7.23□□□□□ -1.25
UPF3P48412 RTC2YBR147W 891 nt7.23□□□□□ -1.25
UPF3P48412 NUP53YMR153W 1428 nt7.23□□□□□ -1.25
UPF3P48412 TCB1YOR086C 3561 nt7.23□□□□□ -1.25
UPF3P48412 STE3YKL178C 1413 nt7.22□□□□□ -1.25
UPF3P48412 TPI1YDR050C 747 nt7.22□□□□□ -1.25
UPF3P48412 tL(UAA)B1tL(UAA)B1 84 nt7.22□□□□□ -1.25
UPF3P48412 tL(UAA)B2tL(UAA)B2 84 nt7.22□□□□□ -1.25
UPF3P48412 tL(UAA)DtL(UAA)D 84 nt7.22□□□□□ -1.25
UPF3P48412 SUP51tL(UAA)J 84 nt7.22□□□□□ -1.25
UPF3P48412 tL(UAA)KtL(UAA)K 84 nt7.22□□□□□ -1.25
UPF3P48412 tL(UAA)LtL(UAA)L 84 nt7.22□□□□□ -1.25
UPF3P48412 tL(UAA)NtL(UAA)N 84 nt7.22□□□□□ -1.25
UPF3P48412 ERV25YML012W 636 nt7.22□□□□□ -1.25
UPF3P48412 SMC5YOL034W 3282 nt7.21□□□□□ -1.25
UPF3P48412 DCR2YLR361C 1737 nt7.21□□□□□ -1.25
UPF3P48412 PSP2YML017W 1782 nt7.21□□□□□ -1.25
UPF3P48412 YJL043WYJL043W 774 nt7.21□□□□□ -1.26
UPF3P48412 APT1YML022W 564 nt7.21□□□□□ -1.26
UPF3P48412 YNL017CYNL017C 339 nt7.21□□□□□ -1.26
UPF3P48412 YOR041CYOR041C 432 nt7.21□□□□□ -1.26
UPF3P48412 ERR3YMR323W 1314 nt7.21□□□□□ -1.26
UPF3P48412 ERR1YOR393W 1314 nt7.21□□□□□ -1.26
UPF3P48412 ERR2YPL281C 1314 nt7.21□□□□□ -1.26
UPF3P48412 YPC1YBR183W 951 nt7.2□□□□□ -1.26
UPF3P48412 CKI1YLR133W 1749 nt7.2□□□□□ -1.26
UPF3P48412 POX1YGL205W 2247 nt7.19□□□□□ -1.26
UPF3P48412 GTS1YGL181W 1191 nt7.19□□□□□ -1.26
UPF3P48412 DAL80YKR034W 810 nt7.19□□□□□ -1.26
UPF3P48412 HNM1YGL077C 1692 nt7.19□□□□□ -1.26
UPF3P48412 YNL295WYNL295W 1575 nt7.18□□□□□ -1.26
UPF3P48412 YNL165WYNL165W 1221 nt7.18□□□□□ -1.26
UPF3P48412 YNL040WYNL040W 1371 nt7.18□□□□□ -1.26
UPF3P48412 CDC23YHR166C 1881 nt7.17□□□□□ -1.26
UPF3P48412 CDC13YDL220C 2775 nt7.17□□□□□ -1.26
UPF3P48412 RRP43YCR035C 1185 nt7.17□□□□□ -1.26
UPF3P48412 ATO2YNR002C 849 nt7.17□□□□□ -1.26
UPF3P48412 INP54YOL065C 1155 nt7.17□□□□□ -1.26
UPF3P48412 SPR1YOR190W 1338 nt7.17□□□□□ -1.26
UPF3P48412 BAP3YDR046C 1815 nt7.17□□□□□ -1.26
UPF3P48412 BUD9YGR041W 1644 nt7.16□□□□□ -1.26
UPF3P48412 RPL12BYDR418W 498 nt7.16□□□□□ -1.26
UPF3P48412 RRP46YGR095C 672 nt7.16□□□□□ -1.26
UPF3P48412 YAL016C-AYAL016C-A 315 nt7.16□□□□□ -1.26
UPF3P48412 FUS3YBL016W 1062 nt7.16□□□□□ -1.26
UPF3P48412 YMR253CYMR253C 1245 nt7.16□□□□□ -1.26
UPF3P48412 CPT1YNL130C 1182 nt7.16□□□□□ -1.26
UPF3P48412 OPI1YHL020C 1215 nt7.15□□□□□ -1.26
UPF3P48412 YAH1YPL252C 519 nt7.15□□□□□ -1.26
UPF3P48412 CMK2YOL016C 1344 nt7.15□□□□□ -1.26
UPF3P48412 MAS2YHR024C 1449 nt7.15□□□□□ -1.27
UPF3P48412 HAC1YFL031W 717 nt7.14□□□□□ -1.27
UPF3P48412 YKR018CYKR018C 2178 nt7.14□□□□□ -1.27
UPF3P48412 MSS51YLR203C 1311 nt7.14□□□□□ -1.27
UPF3P48412 PNS1YOR161C 1620 nt7.13□□□□□ -1.27
UPF3P48412 GET2YER083C 858 nt7.13□□□□□ -1.27
UPF3P48412 YML034C-AYML034C-A 399 nt7.13□□□□□ -1.27
UPF3P48412 ELP3YPL086C 1674 nt7.12□□□□□ -1.27
UPF3P48412 TOS1YBR162C 1368 nt7.12□□□□□ -1.27
UPF3P48412 YDR327WYDR327W 327 nt7.12□□□□□ -1.27
UPF3P48412 EDC2YER035W 438 nt7.12□□□□□ -1.27
UPF3P48412 YGL260WYGL260W 231 nt7.12□□□□□ -1.27
UPF3P48412 ADH6YMR318C 1083 nt7.12□□□□□ -1.27
UPF3P48412 SEC24YIL109C 2781 nt7.12□□□□□ -1.27
UPF3P48412 JIP4YDR475C 2631 nt7.12□□□□□ -1.27
UPF3P48412 GDA1YEL042W 1557 nt7.12□□□□□ -1.27
UPF3P48412 PRB1YEL060C 1908 nt7.11□□□□□ -1.27
UPF3P48412 BDS1YOL164W 1941 nt7.11□□□□□ -1.27
UPF3P48412 CAN1YEL063C 1773 nt7.11□□□□□ -1.27
UPF3P48412 URH1YDR400W 1023 nt7.11□□□□□ -1.27
Retrieved 100 of 7,029 protein–RNA pairs in 8.8 ms