Protein–RNA interactions for Protein: P39059

COL15A1, Collagen alpha-1(XV) chain, humanhuman

Predictions only

Length 1,388 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL15A1P39059 RDX-210ENST00000530301 1549 ntTSL 1 (best) BASIC32.44■■■□□ 2.78
COL15A1P39059 TSPY13P-201ENST00000338964 914 ntBASIC32.44■■■□□ 2.78
COL15A1P39059 MXD3-208ENST00000513063 861 ntAPPRIS P1 TSL 5 BASIC32.44■■■□□ 2.78
COL15A1P39059 AL157400.5-201ENST00000507624 621 ntBASIC32.43■■■□□ 2.78
COL15A1P39059 FEZ1-201ENST00000278919 1748 ntAPPRIS P1 TSL 1 (best) BASIC32.43■■■□□ 2.78
COL15A1P39059 TMEM150A-202ENST00000334462 1518 ntAPPRIS P1 TSL 1 (best) BASIC32.42■■■□□ 2.78
COL15A1P39059 AC004987.1-201ENST00000428627 508 ntBASIC32.42■■■□□ 2.78
COL15A1P39059 CCDC37-AS1-202ENST00000506660 986 ntTSL 1 (best) BASIC32.42■■■□□ 2.78
COL15A1P39059 TM6SF1-202ENST00000322019 2074 ntAPPRIS P1 TSL 1 (best) BASIC32.41■■■□□ 2.78
COL15A1P39059 MOB2-207ENST00000614710 705 ntTSL 5 BASIC32.41■■■□□ 2.78
COL15A1P39059 SLC9A3-AS1-207ENST00000607286 1357 ntTSL 5 BASIC32.41■■■□□ 2.78
COL15A1P39059 CCDC88C-205ENST00000553403 1651 ntTSL 1 (best) BASIC32.4■■■□□ 2.78
COL15A1P39059 IRX1-201ENST00000302006 1858 ntAPPRIS P1 TSL 1 (best) BASIC32.4■■■□□ 2.78
COL15A1P39059 RAB4B-203ENST00000594800 1173 ntAPPRIS P1 TSL 5 BASIC32.4■■■□□ 2.78
COL15A1P39059 MARCH11-201ENST00000332432 1741 ntAPPRIS P1 TSL 5 BASIC32.4■■■□□ 2.78
COL15A1P39059 FBRSL1-201ENST00000434748 5568 ntAPPRIS P2 TSL 1 (best) BASIC32.4■■■□□ 2.78
COL15A1P39059 NRXN1-228ENST00000628364 2444 ntTSL 5 BASIC32.39■■■□□ 2.78
COL15A1P39059 ATP5G2P3-201ENST00000429083 425 ntBASIC32.39■■■□□ 2.78
COL15A1P39059 OPRD1-202ENST00000621425 1217 ntTSL 1 (best) BASIC32.39■■■□□ 2.78
COL15A1P39059 PRELID2-207ENST00000511435 1894 ntAPPRIS ALT1 TSL 2 BASIC32.38■■■□□ 2.77
COL15A1P39059 AC107214.1-201ENST00000457303 559 ntTSL 1 (best) BASIC32.38■■■□□ 2.77
COL15A1P39059 AMN-201ENST00000299155 1907 ntAPPRIS P2 TSL 1 (best) BASIC32.38■■■□□ 2.77
COL15A1P39059 CIB2-201ENST00000258930 1598 ntAPPRIS P1 TSL 1 (best) BASIC32.38■■■□□ 2.77
COL15A1P39059 WDR86-204ENST00000477459 1428 ntTSL 2 BASIC32.37■■■□□ 2.77
COL15A1P39059 MZT2B-201ENST00000281871 933 ntAPPRIS P3 TSL 1 (best) BASIC32.37■■■□□ 2.77
COL15A1P39059 MZT2A-201ENST00000309451 624 ntAPPRIS P1 TSL 1 (best) BASIC32.37■■■□□ 2.77
COL15A1P39059 AC126177.7-201ENST00000547904 679 ntBASIC32.37■■■□□ 2.77
COL15A1P39059 GNAS-AS1_1.1-201ENST00000621898 103 ntBASIC32.37■■■□□ 2.77
COL15A1P39059 RASSF8-202ENST00000381352 2320 ntTSL 1 (best) BASIC32.37■■■□□ 2.77
COL15A1P39059 PRRX2-201ENST00000372469 1311 ntAPPRIS P1 TSL 1 (best) BASIC32.36■■■□□ 2.77
COL15A1P39059 LOR-201ENST00000368742 1230 ntAPPRIS P1 TSL 1 (best) BASIC32.36■■■□□ 2.77
COL15A1P39059 MIR1-1HG-202ENST00000624914 1220 ntTSL 1 (best) BASIC32.35■■■□□ 2.77
COL15A1P39059 PSMG4-207ENST00000451246 824 ntTSL 3 BASIC32.34■■■□□ 2.77
COL15A1P39059 ZNF513-201ENST00000323703 2139 ntAPPRIS P1 TSL 1 (best) BASIC32.34■■■□□ 2.77
COL15A1P39059 FEZF2-202ENST00000475839 1918 ntAPPRIS P1 TSL 1 (best) BASIC32.34■■■□□ 2.77
COL15A1P39059 PPP1R14A-201ENST00000301242 777 ntAPPRIS P1 TSL 1 (best) BASIC32.33■■■□□ 2.77
COL15A1P39059 ARMC10-211ENST00000541300 2266 ntTSL 1 (best) BASIC32.33■■■□□ 2.77
COL15A1P39059 C19orf12-207ENST00000592153 1504 ntTSL 1 (best) BASIC32.33■■■□□ 2.77
COL15A1P39059 ZDHHC3-203ENST00000342790 1336 ntTSL 5 BASIC32.33■■■□□ 2.77
COL15A1P39059 PHOX2A-201ENST00000298231 1699 ntAPPRIS P1 TSL 1 (best) BASIC32.33■■■□□ 2.77
COL15A1P39059 RPUSD1-208ENST00000567114 1835 ntTSL 2 BASIC32.33■■■□□ 2.77
COL15A1P39059 C20orf24-201ENST00000342422 896 ntTSL 2 BASIC32.32■■■□□ 2.77
COL15A1P39059 C20orf24-202ENST00000344795 1114 ntAPPRIS P1 TSL 1 (best) BASIC32.32■■■□□ 2.77
COL15A1P39059 GUK1-208ENST00000366728 842 ntTSL 2 BASIC32.32■■■□□ 2.77
COL15A1P39059 HOMER3-207ENST00000594794 903 ntTSL 5 BASIC32.32■■■□□ 2.77
COL15A1P39059 AC027237.3-202ENST00000558617 1778 ntTSL 2 BASIC32.32■■■□□ 2.77
COL15A1P39059 AGAP3-216ENST00000479901 1881 ntTSL 5 BASIC32.32■■■□□ 2.76
COL15A1P39059 DSG2-202ENST00000585206 1081 ntTSL 2 BASIC32.32■■■□□ 2.76
COL15A1P39059 IL17D-201ENST00000304920 1861 ntAPPRIS P1 TSL 1 (best) BASIC32.3■■■□□ 2.76
COL15A1P39059 FAM78B-201ENST00000338353 1597 ntAPPRIS P1 TSL 1 (best) BASIC32.29■■■□□ 2.76
COL15A1P39059 ARL6IP4-208ENST00000439686 796 ntAPPRIS ALT2 TSL 3 BASIC32.28■■■□□ 2.76
COL15A1P39059 LYPD6B-204ENST00000409876 1248 ntAPPRIS ALT2 TSL 1 (best) BASIC32.27■■■□□ 2.76
COL15A1P39059 DHRS13-203ENST00000426464 1569 ntTSL 2 BASIC32.26■■■□□ 2.76
COL15A1P39059 AC007029.1-201ENST00000604183 313 ntBASIC32.26■■■□□ 2.75
COL15A1P39059 AP004833.2-201ENST00000532228 1454 ntBASIC32.25■■■□□ 2.75
COL15A1P39059 RARRES2P1-201ENST00000474487 481 ntBASIC32.25■■■□□ 2.75
COL15A1P39059 C1orf232-201ENST00000634842 643 ntAPPRIS P5 TSL 5 BASIC32.25■■■□□ 2.75
COL15A1P39059 KCNG2-201ENST00000316249 1401 ntAPPRIS P1 TSL 1 (best) BASIC32.25■■■□□ 2.75
COL15A1P39059 FGF18-201ENST00000274625 1986 ntAPPRIS P1 TSL 1 (best) BASIC32.24■■■□□ 2.75
COL15A1P39059 SP8-201ENST00000361443 1714 ntAPPRIS P3 TSL 1 (best) BASIC32.23■■■□□ 2.75
COL15A1P39059 KLF16-204ENST00000617223 1133 ntAPPRIS P1 TSL 1 (best) BASIC32.23■■■□□ 2.75
COL15A1P39059 NEUROG2-201ENST00000313341 2287 ntAPPRIS P1 TSL 1 (best) BASIC32.23■■■□□ 2.75
COL15A1P39059 DCBLD1-201ENST00000296955 1979 ntAPPRIS P2 TSL 1 (best) BASIC32.23■■■□□ 2.75
COL15A1P39059 IFI30-201ENST00000407280 1134 ntAPPRIS P1 TSL 1 (best) BASIC32.22■■■□□ 2.75
COL15A1P39059 FLVCR1-AS1-203ENST00000426161 892 ntTSL 1 (best) BASIC32.22■■■□□ 2.75
COL15A1P39059 FAM222B-205ENST00000577682 549 ntTSL 4 BASIC32.22■■■□□ 2.75
COL15A1P39059 EFNA3-201ENST00000368408 1782 ntAPPRIS P1 TSL 1 (best) BASIC32.22■■■□□ 2.75
COL15A1P39059 TNFRSF25-204ENST00000356876 1625 ntAPPRIS ALT2 TSL 1 (best) BASIC32.22■■■□□ 2.75
COL15A1P39059 OXLD1-201ENST00000374741 620 ntAPPRIS P1 TSL 1 (best) BASIC32.21■■■□□ 2.75
COL15A1P39059 AMZ2-201ENST00000359783 1722 ntTSL 5 BASIC32.21■■■□□ 2.75
COL15A1P39059 KCTD17-202ENST00000403888 1763 ntAPPRIS ALT2 TSL 1 (best) BASIC32.21■■■□□ 2.75
COL15A1P39059 ATF4-201ENST00000337304 2019 ntAPPRIS P1 TSL 1 (best) BASIC32.21■■■□□ 2.75
COL15A1P39059 LTC4S-205ENST00000486713 496 ntTSL 2 BASIC32.2■■■□□ 2.75
COL15A1P39059 HOXB3-212ENST00000498678 2196 ntAPPRIS P1 TSL 2 BASIC32.2■■■□□ 2.75
COL15A1P39059 FOXE3-201ENST00000335071 1981 ntAPPRIS P1 BASIC32.2■■■□□ 2.75
COL15A1P39059 CGREF1-203ENST00000402394 1906 ntAPPRIS P2 TSL 2 BASIC32.19■■■□□ 2.74
COL15A1P39059 RPL27A-206ENST00000530022 878 ntTSL 1 (best) BASIC32.19■■■□□ 2.74
COL15A1P39059 UBE2I-213ENST00000566587 1098 ntAPPRIS P1 TSL 2 BASIC32.19■■■□□ 2.74
COL15A1P39059 C16orf52-207ENST00000569656 1257 ntTSL 5 BASIC32.19■■■□□ 2.74
COL15A1P39059 SEC11C-204ENST00000587834 1202 ntAPPRIS P1 TSL 1 (best) BASIC32.19■■■□□ 2.74
COL15A1P39059 AC129492.7-201ENST00000622992 756 ntBASIC32.19■■■□□ 2.74
COL15A1P39059 ILDR2-208ENST00000529387 1238 ntTSL 5 BASIC32.18■■■□□ 2.74
COL15A1P39059 GSR-205ENST00000541648 1410 ntTSL 1 (best) BASIC32.17■■■□□ 2.74
COL15A1P39059 COPRS-201ENST00000302362 968 ntAPPRIS P1 TSL 1 (best) BASIC32.17■■■□□ 2.74
COL15A1P39059 TNFRSF12A-201ENST00000326577 1033 ntAPPRIS P1 TSL 1 (best) BASIC32.17■■■□□ 2.74
COL15A1P39059 AC148477.1-201ENST00000537720 476 ntTSL 3 BASIC32.17■■■□□ 2.74
COL15A1P39059 SLC25A23-203ENST00000334510 1424 ntTSL 1 (best) BASIC32.17■■■□□ 2.74
COL15A1P39059 AC009831.1-201ENST00000580420 1582 ntBASIC32.17■■■□□ 2.74
COL15A1P39059 LDLRAD4-218ENST00000592991 1640 ntTSL 1 (best) BASIC32.17■■■□□ 2.74
COL15A1P39059 AL121987.2-201ENST00000418602 1578 ntTSL 2 BASIC32.16■■■□□ 2.74
COL15A1P39059 REST-210ENST00000638187 1334 ntTSL 5 BASIC32.16■■■□□ 2.74
COL15A1P39059 AL592293.1-201ENST00000502889 1188 ntBASIC32.15■■■□□ 2.74
COL15A1P39059 VIPR2-204ENST00000421760 717 ntTSL 3 BASIC32.14■■■□□ 2.74
COL15A1P39059 AL121899.1-202ENST00000411839 536 ntTSL 5 BASIC32.13■■■□□ 2.73
COL15A1P39059 CLEC11A-201ENST00000250340 1419 ntAPPRIS P1 TSL 1 (best) BASIC32.12■■■□□ 2.73
COL15A1P39059 PTGER1-201ENST00000292513 1421 ntAPPRIS P1 TSL 1 (best) BASIC32.12■■■□□ 2.73
COL15A1P39059 PSMG3-202ENST00000288607 1391 ntAPPRIS P1 TSL 1 (best) BASIC32.12■■■□□ 2.73
COL15A1P39059 TTC36-201ENST00000302783 874 ntAPPRIS P1 TSL 1 (best) BASIC32.12■■■□□ 2.73
COL15A1P39059 BCAP31-201ENST00000345046 1589 ntAPPRIS P1 TSL 1 (best) BASIC32.12■■■□□ 2.73
COL15A1P39059 SNX15-202ENST00000377244 1939 ntAPPRIS P1 TSL 1 (best) BASIC32.11■■■□□ 2.73
Retrieved 100 of 98,524 protein–RNA pairs in 99.5 ms