Protein–RNA interactions for Protein: P30532

CHRNA5, Neuronal acetylcholine receptor subunit alpha-5, humanhuman

Predictions only

Length 468 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHRNA5P30532 MKRN1-202ENST00000443720 1601 ntAPPRIS ALT2 TSL 1 (best) BASIC31.7■■■□□ 2.66
CHRNA5P30532 MORF4L1-203ENST00000426013 1880 ntAPPRIS P1 TSL 1 (best) BASIC31.69■■■□□ 2.66
CHRNA5P30532 ERFE-207ENST00000546354 1065 ntAPPRIS P2 TSL 1 (best) BASIC31.69■■■□□ 2.66
CHRNA5P30532 SSBP3-202ENST00000357475 1533 ntTSL 1 (best) BASIC31.69■■■□□ 2.66
CHRNA5P30532 CLEC11A-201ENST00000250340 1419 ntAPPRIS P1 TSL 1 (best) BASIC31.68■■■□□ 2.66
CHRNA5P30532 RSPO4-202ENST00000400634 722 ntTSL 1 (best) BASIC31.68■■■□□ 2.66
CHRNA5P30532 C16orf52-207ENST00000569656 1257 ntTSL 5 BASIC31.68■■■□□ 2.66
CHRNA5P30532 PTPA-210ENST00000414510 1153 ntTSL 1 (best) BASIC31.67■■■□□ 2.66
CHRNA5P30532 VIPR2-204ENST00000421760 717 ntTSL 3 BASIC31.65■■■□□ 2.66
CHRNA5P30532 FAHD1-204ENST00000615972 757 ntTSL 5 BASIC31.65■■■□□ 2.66
CHRNA5P30532 ATRNL1-209ENST00000609571 1818 ntTSL 1 (best) BASIC31.64■■■□□ 2.66
CHRNA5P30532 ADAMTS13-203ENST00000371910 1074 ntTSL 1 (best) BASIC31.64■■■□□ 2.66
CHRNA5P30532 TYMP-201ENST00000252029 1630 ntAPPRIS P3 TSL 1 (best) BASIC31.64■■■□□ 2.65
CHRNA5P30532 ANAPC13-201ENST00000354910 1209 ntAPPRIS P1 TSL 1 (best) BASIC31.63■■■□□ 2.65
CHRNA5P30532 RPL27A-206ENST00000530022 878 ntTSL 1 (best) BASIC31.63■■■□□ 2.65
CHRNA5P30532 AC093390.2-201ENST00000638628 1007 ntTSL 5 BASIC31.63■■■□□ 2.65
CHRNA5P30532 PAOX-206ENST00000480071 1324 ntTSL 1 (best) BASIC31.63■■■□□ 2.65
CHRNA5P30532 GSR-205ENST00000541648 1410 ntTSL 1 (best) BASIC31.63■■■□□ 2.65
CHRNA5P30532 AL135925.1-201ENST00000605920 1701 ntBASIC31.63■■■□□ 2.65
CHRNA5P30532 FBRSL1-201ENST00000434748 5568 ntAPPRIS P2 TSL 1 (best) BASIC31.62■■■□□ 2.65
CHRNA5P30532 SLC35D2-201ENST00000253270 1613 ntAPPRIS P1 TSL 1 (best) BASIC31.62■■■□□ 2.65
CHRNA5P30532 KCNG2-201ENST00000316249 1401 ntAPPRIS P1 TSL 1 (best) BASIC31.62■■■□□ 2.65
CHRNA5P30532 CHPT1-205ENST00000549872 2001 ntAPPRIS ALT2 TSL 5 BASIC31.62■■■□□ 2.65
CHRNA5P30532 HSPB6-202ENST00000587965 711 ntTSL 2 BASIC31.62■■■□□ 2.65
CHRNA5P30532 AC019069.1-201ENST00000610008 1333 ntBASIC31.62■■■□□ 2.65
CHRNA5P30532 TMEM150A-202ENST00000334462 1518 ntAPPRIS P1 TSL 1 (best) BASIC31.61■■■□□ 2.65
CHRNA5P30532 MEST-211ENST00000437945 1455 ntTSL 5 BASIC31.61■■■□□ 2.65
CHRNA5P30532 REST-210ENST00000638187 1334 ntTSL 5 BASIC31.61■■■□□ 2.65
CHRNA5P30532 RASGRP2-204ENST00000377487 642 ntTSL 2 BASIC31.61■■■□□ 2.65
CHRNA5P30532 SULT4A1-201ENST00000330884 2468 ntAPPRIS P1 TSL 1 (best) BASIC31.61■■■□□ 2.65
CHRNA5P30532 FEZ1-201ENST00000278919 1748 ntAPPRIS P1 TSL 1 (best) BASIC31.61■■■□□ 2.65
CHRNA5P30532 DEXI-202ENST00000469379 1393 ntAPPRIS P1 TSL 2 BASIC31.6■■■□□ 2.65
CHRNA5P30532 EFNA1-202ENST00000368407 1926 ntAPPRIS P1 TSL 1 (best) BASIC31.6■■■□□ 2.65
CHRNA5P30532 WBP1-201ENST00000233615 1294 ntAPPRIS P2 TSL 1 (best) BASIC31.6■■■□□ 2.65
CHRNA5P30532 SLC16A8-201ENST00000320521 1878 ntAPPRIS P1 TSL 1 (best) BASIC31.6■■■□□ 2.65
CHRNA5P30532 SLC16A11-201ENST00000308009 1803 ntAPPRIS P2 TSL 1 (best) BASIC31.6■■■□□ 2.65
CHRNA5P30532 INPP4A-203ENST00000409463 1565 ntTSL 1 (best) BASIC31.6■■■□□ 2.65
CHRNA5P30532 MAZ-205ENST00000562337 1574 ntTSL 3 BASIC31.6■■■□□ 2.65
CHRNA5P30532 PTGER1-201ENST00000292513 1421 ntAPPRIS P1 TSL 1 (best) BASIC31.59■■■□□ 2.65
CHRNA5P30532 IGFBP3-202ENST00000381083 1050 ntAPPRIS ALT1 TSL 5 BASIC31.59■■■□□ 2.65
CHRNA5P30532 PSMG4-206ENST00000438998 838 ntAPPRIS P1 TSL 2 BASIC31.59■■■□□ 2.65
CHRNA5P30532 PDXP-201ENST00000215904 2010 ntAPPRIS P1 TSL 1 (best) BASIC31.59■■■□□ 2.65
CHRNA5P30532 HAUS7-201ENST00000370210 1593 ntAPPRIS ALT2 TSL 2 BASIC31.59■■■□□ 2.65
CHRNA5P30532 PANK2-207ENST00000610179 1807 ntAPPRIS ALT2 TSL 1 (best) BASIC31.59■■■□□ 2.65
CHRNA5P30532 ABHD17B-202ENST00000377041 1312 ntAPPRIS P4 TSL 1 (best) BASIC31.58■■■□□ 2.65
CHRNA5P30532 WBP1-202ENST00000393972 1325 ntTSL 2 BASIC31.58■■■□□ 2.65
CHRNA5P30532 AC010980.1-201ENST00000587192 1142 ntBASIC31.58■■■□□ 2.65
CHRNA5P30532 AC026202.3-201ENST00000600805 1127 ntBASIC31.58■■■□□ 2.65
CHRNA5P30532 AC090241.2-201ENST00000602329 432 ntTSL 4 BASIC31.58■■■□□ 2.65
CHRNA5P30532 AC064853.2-201ENST00000641246 144 ntAPPRIS P1 BASIC31.58■■■□□ 2.65
CHRNA5P30532 KRT8P33-201ENST00000508125 1423 ntBASIC31.58■■■□□ 2.65
CHRNA5P30532 DHRS13-203ENST00000426464 1569 ntTSL 2 BASIC31.57■■■□□ 2.64
CHRNA5P30532 TIE1-210ENST00000538015 1140 ntTSL 1 (best) BASIC31.57■■■□□ 2.64
CHRNA5P30532 EID2-201ENST00000390658 1629 ntAPPRIS P1 BASIC31.57■■■□□ 2.64
CHRNA5P30532 DUX4L9-201ENST00000449051 1259 ntBASIC31.56■■■□□ 2.64
CHRNA5P30532 SMPD5-203ENST00000639008 1464 ntBASIC31.56■■■□□ 2.64
CHRNA5P30532 HSPE1-201ENST00000233893 950 ntAPPRIS P1 TSL 1 (best) BASIC31.55■■■□□ 2.64
CHRNA5P30532 PNMT-201ENST00000269582 1253 ntAPPRIS P1 TSL 1 (best) BASIC31.55■■■□□ 2.64
CHRNA5P30532 AC055876.1-201ENST00000430589 895 ntTSL 2 BASIC31.55■■■□□ 2.64
CHRNA5P30532 MKNK2-202ENST00000309340 1744 ntAPPRIS ALT2 TSL 1 (best) BASIC31.55■■■□□ 2.64
CHRNA5P30532 C9orf147-202ENST00000457681 561 ntTSL 2 BASIC31.54■■■□□ 2.64
CHRNA5P30532 AC053527.1-201ENST00000502790 685 ntTSL 3 BASIC31.54■■■□□ 2.64
CHRNA5P30532 IL17D-201ENST00000304920 1861 ntAPPRIS P1 TSL 1 (best) BASIC31.53■■■□□ 2.64
CHRNA5P30532 FTCD-203ENST00000397746 1878 ntAPPRIS P1 TSL 1 (best) BASIC31.53■■■□□ 2.64
CHRNA5P30532 TTC36-201ENST00000302783 874 ntAPPRIS P1 TSL 1 (best) BASIC31.52■■■□□ 2.64
CHRNA5P30532 C17orf49-201ENST00000439424 850 ntAPPRIS P3 TSL 1 (best) BASIC31.52■■■□□ 2.64
CHRNA5P30532 AC104002.3-202ENST00000557170 1100 ntTSL 3 BASIC31.52■■■□□ 2.64
CHRNA5P30532 BHLHE23-202ENST00000612929 1109 ntBASIC31.52■■■□□ 2.64
CHRNA5P30532 AC009299.2-201ENST00000482477 511 ntBASIC31.51■■■□□ 2.63
CHRNA5P30532 PTRH1-208ENST00000543175 814 ntAPPRIS P1 TSL 1 (best) BASIC31.51■■■□□ 2.63
CHRNA5P30532 AC116025.2-201ENST00000576632 443 ntTSL 3 BASIC31.51■■■□□ 2.63
CHRNA5P30532 RUNX2-205ENST00000465038 1770 ntAPPRIS P4 TSL 5 BASIC31.51■■■□□ 2.63
CHRNA5P30532 TMEM151B-201ENST00000438774 1140 ntAPPRIS ALT2 TSL 3 BASIC31.5■■■□□ 2.63
CHRNA5P30532 NKIRAS2-208ENST00000462043 585 ntTSL 4 BASIC31.5■■■□□ 2.63
CHRNA5P30532 EMID1-201ENST00000334018 2173 ntAPPRIS P1 TSL 1 (best) BASIC31.5■■■□□ 2.63
CHRNA5P30532 CTAG1B-201ENST00000328435 748 ntAPPRIS P1 TSL 1 (best) BASIC31.49■■■□□ 2.63
CHRNA5P30532 TMEM238-201ENST00000444469 1000 ntAPPRIS P1 TSL 1 (best) BASIC31.49■■■□□ 2.63
CHRNA5P30532 CTAG1A-202ENST00000599837 748 ntAPPRIS P1 TSL 1 (best) BASIC31.49■■■□□ 2.63
CHRNA5P30532 SPCS2P3-201ENST00000500401 656 ntBASIC31.48■■■□□ 2.63
CHRNA5P30532 AC131212.1-201ENST00000613771 668 ntBASIC31.48■■■□□ 2.63
CHRNA5P30532 SOHLH1-202ENST00000425225 1411 ntAPPRIS ALT2 TSL 5 BASIC31.48■■■□□ 2.63
CHRNA5P30532 SLC25A23-203ENST00000334510 1424 ntTSL 1 (best) BASIC31.47■■■□□ 2.63
CHRNA5P30532 ITPKA-201ENST00000260386 1824 ntAPPRIS P1 TSL 1 (best) BASIC31.46■■■□□ 2.63
CHRNA5P30532 RPUSD1-208ENST00000567114 1835 ntTSL 2 BASIC31.46■■■□□ 2.63
CHRNA5P30532 CIB2-201ENST00000258930 1598 ntAPPRIS P1 TSL 1 (best) BASIC31.46■■■□□ 2.63
CHRNA5P30532 GRASP-201ENST00000293662 1933 ntAPPRIS P1 TSL 1 (best) BASIC31.45■■■□□ 2.63
CHRNA5P30532 NAXE-203ENST00000368235 1125 ntAPPRIS P1 TSL 1 (best) BASIC31.45■■■□□ 2.63
CHRNA5P30532 RP9P-202ENST00000450133 1212 ntBASIC31.44■■■□□ 2.62
CHRNA5P30532 AL359258.2-201ENST00000564063 1566 ntBASIC31.43■■■□□ 2.62
CHRNA5P30532 AC027237.3-202ENST00000558617 1778 ntTSL 2 BASIC31.43■■■□□ 2.62
CHRNA5P30532 PPP4C-201ENST00000279387 1407 ntAPPRIS P1 TSL 1 (best) BASIC31.43■■■□□ 2.62
CHRNA5P30532 SDF2L1-201ENST00000248958 865 ntAPPRIS P1 TSL 1 (best) BASIC31.43■■■□□ 2.62
CHRNA5P30532 UBE2E3-213ENST00000602959 909 ntAPPRIS P1 TSL 5 BASIC31.43■■■□□ 2.62
CHRNA5P30532 SHISA8-202ENST00000621082 1405 ntAPPRIS P2 TSL 5 BASIC31.42■■■□□ 2.62
CHRNA5P30532 BEX3-202ENST00000372634 753 ntTSL 2 BASIC31.42■■■□□ 2.62
CHRNA5P30532 MPC1-201ENST00000341756 976 ntTSL 1 (best) BASIC31.41■■■□□ 2.62
CHRNA5P30532 S100A6-201ENST00000368719 665 ntAPPRIS P1 TSL 1 (best) BASIC31.41■■■□□ 2.62
CHRNA5P30532 AC103834.1-201ENST00000520383 144 ntBASIC31.41■■■□□ 2.62
CHRNA5P30532 CDKN2A-214ENST00000579755 1283 ntAPPRIS P1 TSL 1 (best) BASIC31.41■■■□□ 2.62
CHRNA5P30532 MPC1-206ENST00000621630 977 ntAPPRIS ALT1 TSL 5 BASIC31.41■■■□□ 2.62
Retrieved 100 of 98,524 protein–RNA pairs in 27.2 ms