Protein–RNA interactions for Protein: P22001

KCNA3, Potassium voltage-gated channel subfamily A member 3, humanhuman

Predictions only

Length 575 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KCNA3P22001 VIPR2-204ENST00000421760 717 ntTSL 3 BASIC31.69■■■□□ 2.66
KCNA3P22001 AC090241.2-201ENST00000602329 432 ntTSL 4 BASIC31.69■■■□□ 2.66
KCNA3P22001 SSBP3-204ENST00000371320 2077 ntAPPRIS P3 TSL 1 (best) BASIC31.68■■■□□ 2.66
KCNA3P22001 HSPE1-201ENST00000233893 950 ntAPPRIS P1 TSL 1 (best) BASIC31.68■■■□□ 2.66
KCNA3P22001 MAPK3-203ENST00000395199 1074 ntAPPRIS ALT2 TSL 1 (best) BASIC31.68■■■□□ 2.66
KCNA3P22001 AC064853.2-201ENST00000641246 144 ntAPPRIS P1 BASIC31.68■■■□□ 2.66
KCNA3P22001 DEXI-202ENST00000469379 1393 ntAPPRIS P1 TSL 2 BASIC31.68■■■□□ 2.66
KCNA3P22001 C9orf147-202ENST00000457681 561 ntTSL 2 BASIC31.67■■■□□ 2.66
KCNA3P22001 ABHD17B-202ENST00000377041 1312 ntAPPRIS P4 TSL 1 (best) BASIC31.67■■■□□ 2.66
KCNA3P22001 GSR-205ENST00000541648 1410 ntTSL 1 (best) BASIC31.66■■■□□ 2.66
KCNA3P22001 AC053527.1-201ENST00000502790 685 ntTSL 3 BASIC31.66■■■□□ 2.66
KCNA3P22001 RASL10A-202ENST00000401450 1720 ntTSL 2 BASIC31.66■■■□□ 2.66
KCNA3P22001 WBP1-201ENST00000233615 1294 ntAPPRIS P2 TSL 1 (best) BASIC31.65■■■□□ 2.66
KCNA3P22001 PTPA-210ENST00000414510 1153 ntTSL 1 (best) BASIC31.65■■■□□ 2.66
KCNA3P22001 AC093390.2-201ENST00000638628 1007 ntTSL 5 BASIC31.65■■■□□ 2.66
KCNA3P22001 HNRNPAB-205ENST00000506259 1674 ntAPPRIS ALT2 TSL 1 (best) BASIC31.64■■■□□ 2.66
KCNA3P22001 TMEM151B-201ENST00000438774 1140 ntAPPRIS ALT2 TSL 3 BASIC31.64■■■□□ 2.66
KCNA3P22001 RPL27A-206ENST00000530022 878 ntTSL 1 (best) BASIC31.64■■■□□ 2.66
KCNA3P22001 AC055876.1-201ENST00000430589 895 ntTSL 2 BASIC31.63■■■□□ 2.65
KCNA3P22001 AC116025.2-201ENST00000576632 443 ntTSL 3 BASIC31.63■■■□□ 2.65
KCNA3P22001 TYMP-201ENST00000252029 1630 ntAPPRIS P3 TSL 1 (best) BASIC31.63■■■□□ 2.65
KCNA3P22001 ELK4-201ENST00000289703 2118 ntTSL 1 (best) BASIC31.62■■■□□ 2.65
KCNA3P22001 HMX1-201ENST00000400677 1895 ntAPPRIS P1 TSL 1 (best) BASIC31.62■■■□□ 2.65
KCNA3P22001 AC026202.3-201ENST00000600805 1127 ntBASIC31.62■■■□□ 2.65
KCNA3P22001 SOHLH1-202ENST00000425225 1411 ntAPPRIS ALT2 TSL 5 BASIC31.61■■■□□ 2.65
KCNA3P22001 FSD1L-208ENST00000495708 1906 ntTSL 1 (best) BASIC31.61■■■□□ 2.65
KCNA3P22001 SSBP3-202ENST00000357475 1533 ntTSL 1 (best) BASIC31.6■■■□□ 2.65
KCNA3P22001 PNMT-201ENST00000269582 1253 ntAPPRIS P1 TSL 1 (best) BASIC31.6■■■□□ 2.65
KCNA3P22001 MKRN1-202ENST00000443720 1601 ntAPPRIS ALT2 TSL 1 (best) BASIC31.6■■■□□ 2.65
KCNA3P22001 REST-210ENST00000638187 1334 ntTSL 5 BASIC31.59■■■□□ 2.65
KCNA3P22001 AC009299.2-201ENST00000482477 511 ntBASIC31.58■■■□□ 2.65
KCNA3P22001 PTRH1-208ENST00000543175 814 ntAPPRIS P1 TSL 1 (best) BASIC31.58■■■□□ 2.65
KCNA3P22001 AC010980.1-201ENST00000587192 1142 ntBASIC31.58■■■□□ 2.65
KCNA3P22001 DUX4L9-201ENST00000449051 1259 ntBASIC31.57■■■□□ 2.64
KCNA3P22001 CCDC160-202ENST00000517294 1790 ntAPPRIS P1 TSL 5 BASIC31.57■■■□□ 2.64
KCNA3P22001 KHDRBS3-201ENST00000355849 1977 ntAPPRIS P1 TSL 1 (best) BASIC31.57■■■□□ 2.64
KCNA3P22001 PTGER1-201ENST00000292513 1421 ntAPPRIS P1 TSL 1 (best) BASIC31.57■■■□□ 2.64
KCNA3P22001 KCNG2-201ENST00000316249 1401 ntAPPRIS P1 TSL 1 (best) BASIC31.57■■■□□ 2.64
KCNA3P22001 WBP1-202ENST00000393972 1325 ntTSL 2 BASIC31.55■■■□□ 2.64
KCNA3P22001 SMPD5-203ENST00000639008 1464 ntBASIC31.55■■■□□ 2.64
KCNA3P22001 AC009511.2-201ENST00000545904 679 ntTSL 2 BASIC31.55■■■□□ 2.64
KCNA3P22001 FEZ1-201ENST00000278919 1748 ntAPPRIS P1 TSL 1 (best) BASIC31.55■■■□□ 2.64
KCNA3P22001 PGM5-201ENST00000396392 1782 ntTSL 1 (best) BASIC31.54■■■□□ 2.64
KCNA3P22001 C17orf49-201ENST00000439424 850 ntAPPRIS P3 TSL 1 (best) BASIC31.54■■■□□ 2.64
KCNA3P22001 MORF4L1-203ENST00000426013 1880 ntAPPRIS P1 TSL 1 (best) BASIC31.54■■■□□ 2.64
KCNA3P22001 NAXE-203ENST00000368235 1125 ntAPPRIS P1 TSL 1 (best) BASIC31.53■■■□□ 2.64
KCNA3P22001 PSMG4-206ENST00000438998 838 ntAPPRIS P1 TSL 2 BASIC31.53■■■□□ 2.64
KCNA3P22001 NKIRAS2-208ENST00000462043 585 ntTSL 4 BASIC31.53■■■□□ 2.64
KCNA3P22001 MEST-211ENST00000437945 1455 ntTSL 5 BASIC31.52■■■□□ 2.64
KCNA3P22001 ZFAND2B-201ENST00000289528 1314 ntAPPRIS P1 TSL 1 (best) BASIC31.52■■■□□ 2.64
KCNA3P22001 RP9P-202ENST00000450133 1212 ntBASIC31.52■■■□□ 2.64
KCNA3P22001 AC103834.1-201ENST00000520383 144 ntBASIC31.52■■■□□ 2.64
KCNA3P22001 AC131212.1-201ENST00000613771 668 ntBASIC31.52■■■□□ 2.64
KCNA3P22001 KRT8P33-201ENST00000508125 1423 ntBASIC31.51■■■□□ 2.64
KCNA3P22001 MBOAT7-203ENST00000391754 1797 ntTSL 1 (best) BASIC31.51■■■□□ 2.64
KCNA3P22001 TMEM150A-202ENST00000334462 1518 ntAPPRIS P1 TSL 1 (best) BASIC31.51■■■□□ 2.63
KCNA3P22001 CTAG1B-201ENST00000328435 748 ntAPPRIS P1 TSL 1 (best) BASIC31.51■■■□□ 2.63
KCNA3P22001 SPCS2P3-201ENST00000500401 656 ntBASIC31.51■■■□□ 2.63
KCNA3P22001 CTAG1A-202ENST00000599837 748 ntAPPRIS P1 TSL 1 (best) BASIC31.51■■■□□ 2.63
KCNA3P22001 DHRS13-203ENST00000426464 1569 ntTSL 2 BASIC31.51■■■□□ 2.63
KCNA3P22001 RAB26-201ENST00000210187 1675 ntAPPRIS P1 TSL 1 (best) BASIC31.51■■■□□ 2.63
KCNA3P22001 THA1P-201ENST00000590384 1145 ntBASIC31.5■■■□□ 2.63
KCNA3P22001 MAZ-205ENST00000562337 1574 ntTSL 3 BASIC31.49■■■□□ 2.63
KCNA3P22001 HES6-204ENST00000409182 863 ntTSL 2 BASIC31.49■■■□□ 2.63
KCNA3P22001 TMEM238-201ENST00000444469 1000 ntAPPRIS P1 TSL 1 (best) BASIC31.49■■■□□ 2.63
KCNA3P22001 SLC35D2-201ENST00000253270 1613 ntAPPRIS P1 TSL 1 (best) BASIC31.49■■■□□ 2.63
KCNA3P22001 SLC16A8-201ENST00000320521 1878 ntAPPRIS P1 TSL 1 (best) BASIC31.48■■■□□ 2.63
KCNA3P22001 EFNA1-202ENST00000368407 1926 ntAPPRIS P1 TSL 1 (best) BASIC31.48■■■□□ 2.63
KCNA3P22001 TTC36-201ENST00000302783 874 ntAPPRIS P1 TSL 1 (best) BASIC31.48■■■□□ 2.63
KCNA3P22001 S100A6-201ENST00000368719 665 ntAPPRIS P1 TSL 1 (best) BASIC31.48■■■□□ 2.63
KCNA3P22001 UBE2E3-213ENST00000602959 909 ntAPPRIS P1 TSL 5 BASIC31.48■■■□□ 2.63
KCNA3P22001 TPI1-210ENST00000613953 1460 ntTSL 1 (best) BASIC31.46■■■□□ 2.63
KCNA3P22001 SDF2L1-201ENST00000248958 865 ntAPPRIS P1 TSL 1 (best) BASIC31.46■■■□□ 2.63
KCNA3P22001 AC104002.3-202ENST00000557170 1100 ntTSL 3 BASIC31.46■■■□□ 2.63
KCNA3P22001 BHLHE23-202ENST00000612929 1109 ntBASIC31.46■■■□□ 2.63
KCNA3P22001 AC074183.2-201ENST00000623112 922 ntBASIC31.46■■■□□ 2.63
KCNA3P22001 SLC16A11-201ENST00000308009 1803 ntAPPRIS P2 TSL 1 (best) BASIC31.46■■■□□ 2.63
KCNA3P22001 AL135925.1-201ENST00000605920 1701 ntBASIC31.46■■■□□ 2.63
KCNA3P22001 EID2-201ENST00000390658 1629 ntAPPRIS P1 BASIC31.46■■■□□ 2.63
KCNA3P22001 FOXP1-201ENST00000318779 843 ntTSL 1 (best) BASIC31.45■■■□□ 2.63
KCNA3P22001 GUSBP5-201ENST00000418136 578 ntBASIC31.45■■■□□ 2.63
KCNA3P22001 IL17D-201ENST00000304920 1861 ntAPPRIS P1 TSL 1 (best) BASIC31.44■■■□□ 2.62
KCNA3P22001 INPP4A-203ENST00000409463 1565 ntTSL 1 (best) BASIC31.44■■■□□ 2.62
KCNA3P22001 SHISA8-202ENST00000621082 1405 ntAPPRIS P2 TSL 5 BASIC31.44■■■□□ 2.62
KCNA3P22001 BEX3-202ENST00000372634 753 ntTSL 2 BASIC31.44■■■□□ 2.62
KCNA3P22001 AC025884.2-201ENST00000553429 711 ntBASIC31.44■■■□□ 2.62
KCNA3P22001 SLC25A23-203ENST00000334510 1424 ntTSL 1 (best) BASIC31.43■■■□□ 2.62
KCNA3P22001 MPC1-201ENST00000341756 976 ntTSL 1 (best) BASIC31.43■■■□□ 2.62
KCNA3P22001 OR2A1-AS1-204ENST00000470435 602 ntBASIC31.43■■■□□ 2.62
KCNA3P22001 RAET1E-AS1-203ENST00000606915 1210 ntTSL 1 (best) BASIC31.43■■■□□ 2.62
KCNA3P22001 PVT1_1.1-201ENST00000615125 194 ntBASIC31.43■■■□□ 2.62
KCNA3P22001 MPC1-206ENST00000621630 977 ntAPPRIS ALT1 TSL 5 BASIC31.43■■■□□ 2.62
KCNA3P22001 MPC1-207ENST00000621685 1192 ntTSL 5 BASIC31.43■■■□□ 2.62
KCNA3P22001 HAUS7-201ENST00000370210 1593 ntAPPRIS ALT2 TSL 2 BASIC31.43■■■□□ 2.62
KCNA3P22001 CD63-201ENST00000257857 1070 ntAPPRIS P1 TSL 1 (best) BASIC31.42■■■□□ 2.62
KCNA3P22001 CDKN2A-214ENST00000579755 1283 ntAPPRIS P1 TSL 1 (best) BASIC31.42■■■□□ 2.62
KCNA3P22001 CENPX-202ENST00000392359 805 ntAPPRIS P1 TSL 2 BASIC31.41■■■□□ 2.62
KCNA3P22001 MDK-203ENST00000395566 828 ntAPPRIS P2 TSL 1 (best) BASIC31.41■■■□□ 2.62
KCNA3P22001 H2AFY-204ENST00000423969 924 ntTSL 2 BASIC31.41■■■□□ 2.62
KCNA3P22001 AC139795.1-203ENST00000515045 853 ntTSL 2 BASIC31.41■■■□□ 2.62
Retrieved 100 of 98,524 protein–RNA pairs in 10.8 ms