Protein–RNA interactions for Protein: P12694

BCKDHA, 2-oxoisovalerate dehydrogenase subunit alpha, mitochondrial, humanhuman

Predictions only

Length 445 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BCKDHAP12694 CCDC136-206ENST00000464832 1720 ntAPPRIS ALT2 TSL 5 BASIC24.05■■□□□ 1.44
BCKDHAP12694 HDAC11-206ENST00000405025 576 ntTSL 4 BASIC24.05■■□□□ 1.44
BCKDHAP12694 MAZ-208ENST00000563402 1461 ntTSL 5 BASIC24.05■■□□□ 1.44
BCKDHAP12694 MAZ-210ENST00000566906 1455 ntTSL 5 BASIC24.05■■□□□ 1.44
BCKDHAP12694 LMO2-201ENST00000257818 2294 ntTSL 1 (best) BASIC24.04■■□□□ 1.44
BCKDHAP12694 RFLNA-205ENST00000546355 2354 ntAPPRIS ALT1 TSL 1 (best) BASIC24.04■■□□□ 1.44
BCKDHAP12694 AC009690.3-201ENST00000569547 1902 ntAPPRIS P1 TSL 2 BASIC24.04■■□□□ 1.44
BCKDHAP12694 ZDHHC16-207ENST00000393760 2014 ntAPPRIS P4 TSL 1 (best) BASIC24.03■■□□□ 1.44
BCKDHAP12694 DNLZ-201ENST00000371738 724 ntAPPRIS P1 TSL 1 (best) BASIC24.03■■□□□ 1.44
BCKDHAP12694 SMIM12-205ENST00000456842 918 ntAPPRIS P1 TSL 2 BASIC24.03■■□□□ 1.44
BCKDHAP12694 DHRS13-201ENST00000378895 1921 ntAPPRIS P1 TSL 1 (best) BASIC24.02■■□□□ 1.44
BCKDHAP12694 F8A1-201ENST00000610495 1713 ntAPPRIS P1 BASIC24.02■■□□□ 1.44
BCKDHAP12694 AP000911.1-206ENST00000531938 711 ntTSL 3 BASIC24.02■■□□□ 1.44
BCKDHAP12694 SPIRE1-202ENST00000409402 5665 ntAPPRIS ALT2 TSL 1 (best) BASIC24.01■■□□□ 1.43
BCKDHAP12694 SSBP3-202ENST00000357475 1533 ntTSL 1 (best) BASIC24.01■■□□□ 1.43
BCKDHAP12694 VEGFA-207ENST00000413642 1197 ntAPPRIS ALT2 TSL 1 (best) BASIC24.01■■□□□ 1.43
BCKDHAP12694 AC044849.2-201ENST00000606596 710 ntBASIC24.01■■□□□ 1.43
BCKDHAP12694 VEGFA-226ENST00000611736 1239 ntTSL 1 (best) BASIC24.01■■□□□ 1.43
BCKDHAP12694 CIC-201ENST00000160740 6111 ntAPPRIS ALT1 TSL 5 BASIC24■■□□□ 1.43
BCKDHAP12694 MAD2L2-207ENST00000376692 1118 ntAPPRIS P1 TSL 1 (best) BASIC24■■□□□ 1.43
BCKDHAP12694 GSX2-202ENST00000503800 1181 ntTSL 5 BASIC24■■□□□ 1.43
BCKDHAP12694 COX4I1-203ENST00000562336 873 ntAPPRIS P1 TSL 5 BASIC24■■□□□ 1.43
BCKDHAP12694 ANKRD53-203ENST00000441349 1797 ntTSL 5 BASIC24■■□□□ 1.43
BCKDHAP12694 NELFB-202ENST00000634710 1887 ntAPPRIS P2 TSL 1 (best) BASIC24■■□□□ 1.43
BCKDHAP12694 ADGRB2-204ENST00000398542 5176 ntTSL 5 BASIC23.99■■□□□ 1.43
BCKDHAP12694 DAZAP1-202ENST00000336761 2290 ntTSL 5 BASIC23.99■■□□□ 1.43
BCKDHAP12694 SETBP1-202ENST00000426838 1785 ntAPPRIS ALT2 TSL 1 (best) BASIC23.99■■□□□ 1.43
BCKDHAP12694 THAP4-204ENST00000407315 2367 ntAPPRIS P1 TSL 1 (best) BASIC23.99■■□□□ 1.43
BCKDHAP12694 CDPF1-201ENST00000314567 1875 ntAPPRIS P2 TSL 1 (best) BASIC23.99■■□□□ 1.43
BCKDHAP12694 SRSF9-201ENST00000229390 1201 ntAPPRIS P1 TSL 1 (best) BASIC23.99■■□□□ 1.43
BCKDHAP12694 H2AFV-204ENST00000350771 687 ntTSL 2 BASIC23.99■■□□□ 1.43
BCKDHAP12694 CAPNS1-217ENST00000629983 799 ntTSL 5 BASIC23.99■■□□□ 1.43
BCKDHAP12694 C2orf88-204ENST00000409870 1441 ntAPPRIS P1 TSL 2 BASIC23.99■■□□□ 1.43
BCKDHAP12694 NRARP-201ENST00000356628 1770 ntAPPRIS P1 BASIC23.98■■□□□ 1.43
BCKDHAP12694 LYPD6B-203ENST00000409642 1577 ntAPPRIS P3 TSL 1 (best) BASIC23.98■■□□□ 1.43
BCKDHAP12694 DNMT3A-206ENST00000406659 1775 ntTSL 1 (best) BASIC23.98■■□□□ 1.43
BCKDHAP12694 CPNE1-202ENST00000352393 2147 ntAPPRIS P1 TSL 1 (best) BASIC23.98■■□□□ 1.43
BCKDHAP12694 AKAP17A-202ENST00000381261 2187 ntAPPRIS ALT2 TSL 1 (best) BASIC23.96■■□□□ 1.43
BCKDHAP12694 MSANTD2-201ENST00000239614 2495 ntTSL 2 BASIC23.95■■□□□ 1.43
BCKDHAP12694 BCAP31-201ENST00000345046 1589 ntAPPRIS P1 TSL 1 (best) BASIC23.95■■□□□ 1.43
BCKDHAP12694 ZNF653-201ENST00000293771 2240 ntAPPRIS P1 TSL 1 (best) BASIC23.95■■□□□ 1.42
BCKDHAP12694 KIAA2013-201ENST00000376572 2815 ntAPPRIS P1 TSL 1 (best) BASIC23.95■■□□□ 1.42
BCKDHAP12694 SHF-207ENST00000560540 2062 ntTSL 5 BASIC23.95■■□□□ 1.42
BCKDHAP12694 PRSS41-201ENST00000399677 1127 ntAPPRIS P1 TSL 5 BASIC23.95■■□□□ 1.42
BCKDHAP12694 IRAK1-205ENST00000429936 2127 ntTSL 5 BASIC23.95■■□□□ 1.42
BCKDHAP12694 OXSR1-203ENST00000446845 1908 ntTSL 5 BASIC23.94■■□□□ 1.42
BCKDHAP12694 PLPPR3-201ENST00000359894 2387 ntAPPRIS P3 TSL 1 (best) BASIC23.94■■□□□ 1.42
BCKDHAP12694 FSD1-201ENST00000221856 1831 ntAPPRIS P1 TSL 1 (best) BASIC23.94■■□□□ 1.42
BCKDHAP12694 BOD1-201ENST00000285908 1286 ntTSL 1 (best) BASIC23.94■■□□□ 1.42
BCKDHAP12694 BOD1-206ENST00000480951 814 ntTSL 2 BASIC23.94■■□□□ 1.42
BCKDHAP12694 U2AF1L5-201ENST00000610664 897 ntAPPRIS P5 TSL 1 (best) BASIC23.94■■□□□ 1.42
BCKDHAP12694 KLC1-225ENST00000557575 2188 ntTSL 5 BASIC23.93■■□□□ 1.42
BCKDHAP12694 HTRA1-201ENST00000368984 2120 ntAPPRIS P1 TSL 1 (best) BASIC23.93■■□□□ 1.42
BCKDHAP12694 TIGD3-201ENST00000309880 2012 ntAPPRIS P1 TSL 2 BASIC23.93■■□□□ 1.42
BCKDHAP12694 DNAJB2-202ENST00000392086 1946 ntAPPRIS P1 TSL 2 BASIC23.92■■□□□ 1.42
BCKDHAP12694 FGF19-201ENST00000294312 2447 ntAPPRIS P1 TSL 1 (best) BASIC23.92■■□□□ 1.42
BCKDHAP12694 DCUN1D5-201ENST00000260247 1337 ntAPPRIS P1 TSL 1 (best) BASIC23.92■■□□□ 1.42
BCKDHAP12694 RTN2-208ENST00000590526 2357 ntTSL 5 BASIC23.92■■□□□ 1.42
BCKDHAP12694 VSIG8-201ENST00000368100 1818 ntAPPRIS P1 TSL 1 (best) BASIC23.92■■□□□ 1.42
BCKDHAP12694 FOXG1-201ENST00000313071 4890 ntAPPRIS P1 BASIC23.92■■□□□ 1.42
BCKDHAP12694 AC104109.3-201ENST00000519718 483 ntAPPRIS P1 TSL 5 BASIC23.92■■□□□ 1.42
BCKDHAP12694 AC110285.7-201ENST00000624417 1536 ntBASIC23.92■■□□□ 1.42
BCKDHAP12694 EMID1-202ENST00000404755 2049 ntTSL 5 BASIC23.91■■□□□ 1.42
BCKDHAP12694 ARMC10-205ENST00000428183 2445 ntTSL 1 (best) BASIC23.91■■□□□ 1.42
BCKDHAP12694 PLBD2-202ENST00000545182 2321 ntTSL 2 BASIC23.91■■□□□ 1.42
BCKDHAP12694 MEN1-204ENST00000377313 1871 ntAPPRIS P3 TSL 2 BASIC23.91■■□□□ 1.42
BCKDHAP12694 LCNL1-201ENST00000408973 1839 ntAPPRIS P1 TSL 2 BASIC23.91■■□□□ 1.42
BCKDHAP12694 PLEKHJ1-201ENST00000326631 1206 ntAPPRIS P1 TSL 1 (best) BASIC23.9■■□□□ 1.42
BCKDHAP12694 NXPH4-201ENST00000349394 1804 ntAPPRIS P1 TSL 1 (best) BASIC23.89■■□□□ 1.42
BCKDHAP12694 VRK2-202ENST00000412104 1916 ntTSL 1 (best) BASIC23.89■■□□□ 1.42
BCKDHAP12694 FLT1-202ENST00000539099 1911 ntTSL 1 (best) BASIC23.89■■□□□ 1.42
BCKDHAP12694 PEX7-203ENST00000541292 945 ntTSL 5 BASIC23.89■■□□□ 1.41
BCKDHAP12694 AC021231.2-201ENST00000594613 730 ntBASIC23.89■■□□□ 1.41
BCKDHAP12694 RUNX2-203ENST00000371436 1588 ntAPPRIS ALT2 TSL 5 BASIC23.89■■□□□ 1.41
BCKDHAP12694 ZNF692-201ENST00000306601 1931 ntAPPRIS P3 TSL 1 (best) BASIC23.88■■□□□ 1.41
BCKDHAP12694 MBD2-201ENST00000256429 5188 ntAPPRIS P1 TSL 1 (best) BASIC23.88■■□□□ 1.41
BCKDHAP12694 RHBDD2-202ENST00000318622 1878 ntTSL 2 BASIC23.88■■□□□ 1.41
BCKDHAP12694 C14orf80-203ENST00000354560 1553 ntAPPRIS ALT2 TSL 1 (best) BASIC23.88■■□□□ 1.41
BCKDHAP12694 TXNL4A-208ENST00000588162 752 ntTSL 2 BASIC23.88■■□□□ 1.41
BCKDHAP12694 NTN3-201ENST00000293973 1986 ntAPPRIS P1 TSL 1 (best) BASIC23.88■■□□□ 1.41
BCKDHAP12694 CAPNS1-215ENST00000628018 1509 ntAPPRIS ALT2 TSL 5 BASIC23.88■■□□□ 1.41
BCKDHAP12694 DHFR-203ENST00000505337 1719 ntAPPRIS P1 TSL 2 BASIC23.87■■□□□ 1.41
BCKDHAP12694 ANKRD16-201ENST00000191063 1567 ntTSL 3 BASIC23.87■■□□□ 1.41
BCKDHAP12694 RASSF5-204ENST00000580449 1932 ntTSL 1 (best) BASIC23.87■■□□□ 1.41
BCKDHAP12694 HINT2-201ENST00000259667 628 ntAPPRIS P1 TSL 1 (best) BASIC23.87■■□□□ 1.41
BCKDHAP12694 CCDC149-203ENST00000502801 1079 ntTSL 1 (best) BASIC23.87■■□□□ 1.41
BCKDHAP12694 OTUD5-202ENST00000376488 2692 ntAPPRIS ALT1 TSL 1 (best) BASIC23.87■■□□□ 1.41
BCKDHAP12694 TLE6-201ENST00000246112 2100 ntAPPRIS ALT2 TSL 1 (best) BASIC23.87■■□□□ 1.41
BCKDHAP12694 DCDC2C-201ENST00000399143 1476 ntAPPRIS P1 TSL 5 BASIC23.87■■□□□ 1.41
BCKDHAP12694 LMTK3-202ENST00000600059 5113 ntAPPRIS ALT2 TSL 2 BASIC23.87■■□□□ 1.41
BCKDHAP12694 GPS1-204ENST00000392358 2276 ntTSL 1 (best) BASIC23.86■■□□□ 1.41
BCKDHAP12694 TOP1MT-208ENST00000519148 1868 ntTSL 2 BASIC23.86■■□□□ 1.41
BCKDHAP12694 MRPL9-201ENST00000368829 882 ntAPPRIS ALT2 TSL 2 BASIC23.86■■□□□ 1.41
BCKDHAP12694 AL589765.4-201ENST00000512280 382 ntTSL 3 BASIC23.86■■□□□ 1.41
BCKDHAP12694 AC009097.4-201ENST00000566738 777 ntTSL 2 BASIC23.86■■□□□ 1.41
BCKDHAP12694 SPTSSA-201ENST00000298130 2777 ntAPPRIS P1 TSL 1 (best) BASIC23.86■■□□□ 1.41
BCKDHAP12694 ZDHHC16-201ENST00000345745 1519 ntTSL 1 (best) BASIC23.85■■□□□ 1.41
BCKDHAP12694 PRKAR1B-203ENST00000403562 1917 ntAPPRIS P1 TSL 1 (best) BASIC23.84■■□□□ 1.41
BCKDHAP12694 RFFL-206ENST00000447669 2030 ntAPPRIS P1 TSL 5 BASIC23.84■■□□□ 1.41
BCKDHAP12694 HOMER3-202ENST00000392351 1557 ntAPPRIS P3 TSL 1 (best) BASIC23.84■■□□□ 1.41
Retrieved 100 of 98,524 protein–RNA pairs in 10.5 ms