Protein–RNA interactions for Protein: P04114

APOB, Apolipoprotein B-100, humanhuman

Known RBP Predictions only

Length 4,563 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
APOBP04114 KRT8P33-201ENST00000508125 1423 ntBASIC16.17■□□□□ 0.18
APOBP04114 IZUMO4-202ENST00000395301 1021 ntAPPRIS ALT2 TSL 1 (best) BASIC16.17■□□□□ 0.18
APOBP04114 C9orf147-202ENST00000457681 561 ntTSL 2 BASIC16.17■□□□□ 0.18
APOBP04114 FAM222B-205ENST00000577682 549 ntTSL 4 BASIC16.17■□□□□ 0.18
APOBP04114 TAZ-201ENST00000369776 1596 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
APOBP04114 AC055876.1-201ENST00000430589 895 ntTSL 2 BASIC16.16■□□□□ 0.18
APOBP04114 MSRB2-201ENST00000376510 1803 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
APOBP04114 CENPX-202ENST00000392359 805 ntAPPRIS P1 TSL 2 BASIC16.16■□□□□ 0.18
APOBP04114 VIPR2-204ENST00000421760 717 ntTSL 3 BASIC16.16■□□□□ 0.18
APOBP04114 HSPB6-202ENST00000587965 711 ntTSL 2 BASIC16.16■□□□□ 0.18
APOBP04114 UBE2E3-213ENST00000602959 909 ntAPPRIS P1 TSL 5 BASIC16.16■□□□□ 0.18
APOBP04114 FEZ1-201ENST00000278919 1748 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
APOBP04114 CARS2-201ENST00000257347 1879 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
APOBP04114 NTHL1-201ENST00000219066 1067 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
APOBP04114 CCER2-201ENST00000571838 1057 ntAPPRIS P2 TSL 5 BASIC16.16■□□□□ 0.18
APOBP04114 AC010980.1-201ENST00000587192 1142 ntBASIC16.16■□□□□ 0.18
APOBP04114 ERFE-207ENST00000546354 1065 ntAPPRIS P2 TSL 1 (best) BASIC16.15■□□□□ 0.18
APOBP04114 OVOL2-201ENST00000278780 1555 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
APOBP04114 NAXE-203ENST00000368235 1125 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
APOBP04114 ZDHHC3-203ENST00000342790 1336 ntTSL 5 BASIC16.15■□□□□ 0.18
APOBP04114 C16orf95-201ENST00000253461 953 ntAPPRIS P3 TSL 1 (best) BASIC16.15■□□□□ 0.18
APOBP04114 DUX4L9-201ENST00000449051 1259 ntBASIC16.15■□□□□ 0.18
APOBP04114 ELK4-201ENST00000289703 2118 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
APOBP04114 CIB2-202ENST00000539011 1511 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
APOBP04114 C17orf49-201ENST00000439424 850 ntAPPRIS P3 TSL 1 (best) BASIC16.14■□□□□ 0.17
APOBP04114 RASSF7-202ENST00000397583 1928 ntAPPRIS P3 TSL 1 (best) BASIC16.14■□□□□ 0.17
APOBP04114 SIAH1-203ENST00000394725 2147 ntAPPRIS P3 TSL 1 (best) BASIC16.14■□□□□ 0.17
APOBP04114 FOXP1-201ENST00000318779 843 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
APOBP04114 CDKN2B-202ENST00000380142 859 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
APOBP04114 AC026202.3-201ENST00000600805 1127 ntBASIC16.13■□□□□ 0.17
APOBP04114 ABHD17B-202ENST00000377041 1312 ntAPPRIS P4 TSL 1 (best) BASIC16.13■□□□□ 0.17
APOBP04114 SHISA8-202ENST00000621082 1405 ntAPPRIS P2 TSL 5 BASIC16.13■□□□□ 0.17
APOBP04114 RFLNA-202ENST00000338359 652 ntAPPRIS P2 TSL 1 (best) BASIC16.12■□□□□ 0.17
APOBP04114 H2AFY-204ENST00000423969 924 ntTSL 2 BASIC16.12■□□□□ 0.17
APOBP04114 AC025884.2-201ENST00000553429 711 ntBASIC16.12■□□□□ 0.17
APOBP04114 RAET1E-AS1-203ENST00000606915 1210 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
APOBP04114 MDK-203ENST00000395566 828 ntAPPRIS P2 TSL 1 (best) BASIC16.12■□□□□ 0.17
APOBP04114 ECEL1P2-201ENST00000461596 1295 ntBASIC16.12■□□□□ 0.17
APOBP04114 NPC2-207ENST00000555619 1035 ntAPPRIS P2 TSL 1 (best) BASIC16.11■□□□□ 0.17
APOBP04114 AC116025.2-201ENST00000576632 443 ntTSL 3 BASIC16.11■□□□□ 0.17
APOBP04114 SSBP3-204ENST00000371320 2077 ntAPPRIS P3 TSL 1 (best) BASIC16.11■□□□□ 0.17
APOBP04114 YIF1A-201ENST00000359461 943 ntTSL 2 BASIC16.1■□□□□ 0.17
APOBP04114 YIF1A-203ENST00000376901 1124 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
APOBP04114 EFNA1-202ENST00000368407 1926 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
APOBP04114 PYCR1-203ENST00000402252 1346 ntTSL 2 BASIC16.1■□□□□ 0.17
APOBP04114 GPRC5B-202ENST00000535671 1215 ntAPPRIS ALT2 TSL 1 (best) BASIC16.1■□□□□ 0.17
APOBP04114 SSBP4-201ENST00000270061 1768 ntAPPRIS P3 TSL 1 (best) BASIC16.09■□□□□ 0.17
APOBP04114 FSD1L-208ENST00000495708 1906 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
APOBP04114 HOXB3-210ENST00000489475 1845 ntTSL 2 BASIC16.09■□□□□ 0.17
APOBP04114 HMX1-201ENST00000400677 1895 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
APOBP04114 NIT1-201ENST00000368007 1749 ntTSL 2 BASIC16.09■□□□□ 0.17
APOBP04114 PNMT-201ENST00000269582 1253 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
APOBP04114 EVA1B-201ENST00000270824 1054 ntAPPRIS P1 TSL 2 BASIC16.09■□□□□ 0.17
APOBP04114 PTPA-210ENST00000414510 1153 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
APOBP04114 GUSBP5-201ENST00000418136 578 ntBASIC16.09■□□□□ 0.17
APOBP04114 WDR86-204ENST00000477459 1428 ntTSL 2 BASIC16.09■□□□□ 0.17
APOBP04114 C14orf80-203ENST00000354560 1553 ntAPPRIS ALT2 TSL 1 (best) BASIC16.09■□□□□ 0.17
APOBP04114 PROCA1-201ENST00000301039 1566 ntTSL 1 (best) BASIC16.08■□□□□ 0.16
APOBP04114 AC133552.2-201ENST00000619106 1032 ntBASIC16.07■□□□□ 0.16
APOBP04114 INPP4A-203ENST00000409463 1565 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
APOBP04114 CCDC160-202ENST00000517294 1790 ntAPPRIS P1 TSL 5 BASIC16.07■□□□□ 0.16
APOBP04114 TTC36-201ENST00000302783 874 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
APOBP04114 CHKB-AS1-201ENST00000380711 578 ntTSL 2 BASIC16.07■□□□□ 0.16
APOBP04114 EPM2A-202ENST00000435470 1278 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
APOBP04114 FAM78B-201ENST00000338353 1597 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
APOBP04114 AC131212.1-201ENST00000613771 668 ntBASIC16.06■□□□□ 0.16
APOBP04114 UBE2D2-205ENST00000505548 1113 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
APOBP04114 ZEB1-AS1-205ENST00000605946 382 ntTSL 5 BASIC16.06■□□□□ 0.16
APOBP04114 PTGER1-201ENST00000292513 1421 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
APOBP04114 BEX3-202ENST00000372634 753 ntTSL 2 BASIC16.06■□□□□ 0.16
APOBP04114 AC126177.7-201ENST00000547904 679 ntBASIC16.06■□□□□ 0.16
APOBP04114 AC145124.1-201ENST00000528514 1361 ntTSL 2 BASIC16.06■□□□□ 0.16
APOBP04114 IL17D-201ENST00000304920 1861 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
APOBP04114 HAUS7-211ENST00000626181 414 ntAPPRIS ALT2 TSL 5 BASIC16.05■□□□□ 0.16
APOBP04114 SLC16A8-201ENST00000320521 1878 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
APOBP04114 PKIG-206ENST00000372892 1338 ntAPPRIS P1 TSL 2 BASIC16.05■□□□□ 0.16
APOBP04114 PEMT-202ENST00000395781 1050 ntTSL 2 BASIC16.05■□□□□ 0.16
APOBP04114 GRK6-206ENST00000507633 1660 ntTSL 5 BASIC16.05■□□□□ 0.16
APOBP04114 SDHAF1-201ENST00000378887 1117 ntAPPRIS P1 BASIC16.05■□□□□ 0.16
APOBP04114 RASL10A-202ENST00000401450 1720 ntTSL 2 BASIC16.05■□□□□ 0.16
APOBP04114 OXLD1-201ENST00000374741 620 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
APOBP04114 RHOBTB3-206ENST00000506817 1432 ntTSL 2 BASIC16.04■□□□□ 0.16
APOBP04114 AC092647.5-201ENST00000426595 1732 ntAPPRIS P1 TSL 5 BASIC16.04■□□□□ 0.16
APOBP04114 PLEKHJ1-213ENST00000591099 1092 ntTSL 2 BASIC16.04■□□□□ 0.16
APOBP04114 WBP1-202ENST00000393972 1325 ntTSL 2 BASIC16.04■□□□□ 0.16
APOBP04114 ANGPTL6-203ENST00000589181 1579 ntTSL 5 BASIC16.04■□□□□ 0.16
APOBP04114 IGFBP6-201ENST00000301464 1169 ntAPPRIS P2 TSL 1 (best) BASIC16.04■□□□□ 0.16
APOBP04114 MOSPD3-204ENST00000424091 1115 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
APOBP04114 PTRH1-208ENST00000543175 814 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
APOBP04114 HNRNPAB-205ENST00000506259 1674 ntAPPRIS ALT2 TSL 1 (best) BASIC16.03■□□□□ 0.16
APOBP04114 PLA2G10-201ENST00000438167 1000 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
APOBP04114 RAP2CP1-202ENST00000605179 643 ntBASIC16.03■□□□□ 0.16
APOBP04114 HES6-204ENST00000409182 863 ntTSL 2 BASIC16.02■□□□□ 0.16
APOBP04114 QDPR-202ENST00000428702 1278 ntTSL 2 BASIC16.02■□□□□ 0.16
APOBP04114 AP002893.1-201ENST00000528885 684 ntTSL 2 BASIC16.02■□□□□ 0.15
APOBP04114 SOCS2-202ENST00000536696 1065 ntAPPRIS P1 TSL 2 BASIC16.02■□□□□ 0.15
APOBP04114 AL356441.2-201ENST00000443009 864 ntBASIC16.01■□□□□ 0.15
APOBP04114 AL355490.1-201ENST00000445808 805 ntTSL 3 BASIC16.01■□□□□ 0.15
APOBP04114 TMEM165-204ENST00000506198 828 ntTSL 2 BASIC16.01■□□□□ 0.15
APOBP04114 PVT1_1.1-201ENST00000615125 194 ntBASIC16.01■□□□□ 0.15
Retrieved 100 of 98,524 protein–RNA pairs in 20.7 ms