Protein–RNA interactions for Protein: P01138

NGF, Beta-nerve growth factor, humanhuman

Predictions only

Length 241 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NGFP01138 AGPS-202ENST00000409888 815 ntTSL 4 BASIC21.85■■□□□ 1.09
NGFP01138 MIR3648-2-201ENST00000581792 180 ntBASIC21.85■■□□□ 1.09
NGFP01138 MIR3648-1-201ENST00000615959 180 ntBASIC21.85■■□□□ 1.09
NGFP01138 MAPKAPK2-201ENST00000294981 2171 ntTSL 1 (best) BASIC21.85■■□□□ 1.09
NGFP01138 TSPAN3-203ENST00000424443 1530 ntTSL 2 BASIC21.85■■□□□ 1.09
NGFP01138 U2AF1-203ENST00000398137 1019 ntTSL 1 (best) BASIC21.84■■□□□ 1.09
NGFP01138 GDI1-215ENST00000630693 786 ntTSL 4 BASIC21.84■■□□□ 1.09
NGFP01138 U2AF1L5-212ENST00000639996 1019 ntTSL 1 (best) BASIC21.84■■□□□ 1.09
NGFP01138 ABHD17C-202ENST00000558464 1976 ntTSL 1 (best) BASIC21.84■■□□□ 1.09
NGFP01138 SYT12-205ENST00000527043 1661 ntAPPRIS P1 TSL 1 (best) BASIC21.84■■□□□ 1.09
NGFP01138 TAZ-201ENST00000369776 1596 ntTSL 1 (best) BASIC21.83■■□□□ 1.09
NGFP01138 COL13A1-203ENST00000398969 2267 ntAPPRIS ALT2 TSL 5 BASIC21.83■■□□□ 1.09
NGFP01138 HOOK2-201ENST00000264827 2603 ntAPPRIS P1 TSL 1 (best) BASIC21.83■■□□□ 1.08
NGFP01138 HIST2H3C-201ENST00000369158 1656 ntAPPRIS P1 BASIC21.82■■□□□ 1.08
NGFP01138 HIST2H3A-201ENST00000403683 1656 ntAPPRIS P1 BASIC21.82■■□□□ 1.08
NGFP01138 ATP8B2-201ENST00000368487 1523 ntTSL 1 (best) BASIC21.82■■□□□ 1.08
NGFP01138 HSD17B1-201ENST00000225929 1265 ntAPPRIS ALT2 TSL 2 BASIC21.82■■□□□ 1.08
NGFP01138 AURKAIP1-203ENST00000338370 1072 ntAPPRIS P1 TSL 1 (best) BASIC21.82■■□□□ 1.08
NGFP01138 MACF1-219ENST00000484793 834 ntTSL 2 BASIC21.82■■□□□ 1.08
NGFP01138 AC016575.1-201ENST00000607026 382 ntBASIC21.82■■□□□ 1.08
NGFP01138 WTAP-206ENST00000621533 2109 ntAPPRIS P1 TSL 2 BASIC21.82■■□□□ 1.08
NGFP01138 HAND2-201ENST00000359562 2780 ntAPPRIS P1 TSL 1 (best) BASIC21.82■■□□□ 1.08
NGFP01138 RCC1L-201ENST00000610322 2300 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
NGFP01138 PLSCR3-202ENST00000535512 2067 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
NGFP01138 CTXN1-201ENST00000318978 1274 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
NGFP01138 ST6GALNAC6-205ENST00000373146 2460 ntAPPRIS P3 TSL 1 (best) BASIC21.8■■□□□ 1.08
NGFP01138 TSPAN4-207ENST00000397411 1025 ntAPPRIS P1 TSL 2 BASIC21.79■■□□□ 1.08
NGFP01138 PLEKHF1-201ENST00000436066 2084 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
NGFP01138 TRADD-201ENST00000345057 1877 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
NGFP01138 LINC01003-201ENST00000564834 1764 ntBASIC21.79■■□□□ 1.08
NGFP01138 AP003068.2-202ENST00000526623 1662 ntTSL 2 BASIC21.79■■□□□ 1.08
NGFP01138 HOXB3-201ENST00000311626 2642 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
NGFP01138 BCAP31-201ENST00000345046 1589 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
NGFP01138 REXO4-201ENST00000371935 1899 ntTSL 3 BASIC21.77■■□□□ 1.08
NGFP01138 SPIRE1-203ENST00000410092 5533 ntAPPRIS P3 TSL 1 (best) BASIC21.77■■□□□ 1.08
NGFP01138 ANKRD65-205ENST00000537107 2190 ntAPPRIS P1 TSL 5 BASIC21.77■■□□□ 1.08
NGFP01138 VEGFC-202ENST00000618562 2064 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.08
NGFP01138 RP9-201ENST00000297157 1121 ntAPPRIS P2 TSL 1 (best) BASIC21.77■■□□□ 1.08
NGFP01138 IGFBPL1-201ENST00000377694 1093 ntAPPRIS P1 TSL 2 BASIC21.77■■□□□ 1.08
NGFP01138 AC018358.1-201ENST00000631079 1402 ntBASIC21.77■■□□□ 1.08
NGFP01138 KRT18-201ENST00000388835 1562 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.08
NGFP01138 BX255925.1-201ENST00000566954 1854 ntBASIC21.77■■□□□ 1.08
NGFP01138 FAM120AOS-202ENST00000423591 1800 ntAPPRIS ALT2 TSL 1 (best) BASIC21.76■■□□□ 1.07
NGFP01138 LMTK3-202ENST00000600059 5113 ntAPPRIS ALT2 TSL 2 BASIC21.76■■□□□ 1.07
NGFP01138 RPS2-210ENST00000530225 765 ntTSL 2 BASIC21.76■■□□□ 1.07
NGFP01138 WNT5A-AS1-201ENST00000469484 500 ntTSL 3 BASIC21.75■■□□□ 1.07
NGFP01138 DCUN1D5-201ENST00000260247 1337 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
NGFP01138 SHOX2-201ENST00000389589 2072 ntAPPRIS P3 TSL 1 (best) BASIC21.75■■□□□ 1.07
NGFP01138 ARPC5L-202ENST00000353214 2507 ntAPPRIS P1 TSL 2 BASIC21.74■■□□□ 1.07
NGFP01138 CDH24-206ENST00000610348 2037 ntTSL 1 (best) BASIC21.74■■□□□ 1.07
NGFP01138 AL118558.1-203ENST00000553701 447 ntTSL 3 BASIC21.74■■□□□ 1.07
NGFP01138 AC092902.2-221ENST00000628476 965 ntTSL 5 BASIC21.74■■□□□ 1.07
NGFP01138 HDHD5-202ENST00000336737 1799 ntAPPRIS ALT2 TSL 1 (best) BASIC21.74■■□□□ 1.07
NGFP01138 SURF1-201ENST00000371974 1093 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
NGFP01138 SURF1-205ENST00000615505 991 ntTSL 1 (best) BASIC21.73■■□□□ 1.07
NGFP01138 ZNF639-209ENST00000496856 2033 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
NGFP01138 MFSD12-201ENST00000355415 2124 ntAPPRIS P3 TSL 1 (best) BASIC21.72■■□□□ 1.07
NGFP01138 AL121987.2-201ENST00000418602 1578 ntTSL 2 BASIC21.72■■□□□ 1.07
NGFP01138 POLR3H-201ENST00000337566 1330 ntTSL 1 (best) BASIC21.72■■□□□ 1.07
NGFP01138 HLA-V-202ENST00000446817 847 ntBASIC21.71■■□□□ 1.07
NGFP01138 RPS2-202ENST00000526522 924 ntTSL 2 BASIC21.71■■□□□ 1.07
NGFP01138 AC008813.1-201ENST00000536597 885 ntBASIC21.71■■□□□ 1.07
NGFP01138 METRNL-202ENST00000570778 967 ntTSL 5 BASIC21.71■■□□□ 1.07
NGFP01138 F8A1-201ENST00000610495 1713 ntAPPRIS P1 BASIC21.71■■□□□ 1.07
NGFP01138 SETBP1-202ENST00000426838 1785 ntAPPRIS ALT2 TSL 1 (best) BASIC21.7■■□□□ 1.06
NGFP01138 GPR25-201ENST00000304244 1224 ntAPPRIS P1 BASIC21.7■■□□□ 1.06
NGFP01138 LAGE3-201ENST00000357360 949 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
NGFP01138 C16orf95-205ENST00000567970 1031 ntAPPRIS ALT2 TSL 5 BASIC21.7■■□□□ 1.06
NGFP01138 TMEM55B-201ENST00000250489 1961 ntAPPRIS P3 TSL 1 (best) BASIC21.7■■□□□ 1.06
NGFP01138 G6PC3-201ENST00000269097 1533 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
NGFP01138 NELFB-202ENST00000634710 1887 ntAPPRIS P2 TSL 1 (best) BASIC21.69■■□□□ 1.06
NGFP01138 NTN3-201ENST00000293973 1986 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
NGFP01138 FAAP20-202ENST00000378546 729 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
NGFP01138 C9orf50-201ENST00000372478 1620 ntAPPRIS P2 TSL 2 BASIC21.69■■□□□ 1.06
NGFP01138 CD6-206ENST00000452451 1782 ntAPPRIS ALT2 TSL 1 (best) BASIC21.69■■□□□ 1.06
NGFP01138 RHEB-201ENST00000262187 2075 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
NGFP01138 SPATA33-209ENST00000579310 1490 ntAPPRIS ALT2 TSL 2 BASIC21.68■■□□□ 1.06
NGFP01138 LACTBL1-202ENST00000618559 1500 ntAPPRIS ALT2 TSL 5 BASIC21.67■■□□□ 1.06
NGFP01138 ACOT12-204ENST00000513751 612 ntTSL 1 (best) BASIC21.67■■□□□ 1.06
NGFP01138 CAPNS1-211ENST00000590874 926 ntTSL 5 BASIC21.67■■□□□ 1.06
NGFP01138 CARM1-202ENST00000344150 2722 ntAPPRIS ALT2 TSL 5 BASIC21.67■■□□□ 1.06
NGFP01138 RAD21-AS1-201ENST00000521487 2010 ntTSL 1 (best) BASIC21.67■■□□□ 1.06
NGFP01138 DTNBP1-212ENST00000622898 1305 ntTSL 1 (best) BASIC21.66■■□□□ 1.06
NGFP01138 NSMCE4A-201ENST00000369017 1224 ntTSL 1 (best) BASIC21.66■■□□□ 1.06
NGFP01138 MIR639-201ENST00000384974 98 ntBASIC21.66■■□□□ 1.06
NGFP01138 LINC01896-206ENST00000575722 1256 ntTSL 2 BASIC21.66■■□□□ 1.06
NGFP01138 FBXL8-206ENST00000519917 1460 ntAPPRIS P1 TSL 5 BASIC21.65■■□□□ 1.06
NGFP01138 PRR5-ARHGAP8-202ENST00000361473 2013 ntTSL 5 BASIC21.65■■□□□ 1.06
NGFP01138 GSR-205ENST00000541648 1410 ntTSL 1 (best) BASIC21.65■■□□□ 1.06
NGFP01138 TCFL5-201ENST00000217162 2453 ntAPPRIS ALT2 TSL 1 (best) BASIC21.65■■□□□ 1.06
NGFP01138 TCFL5-202ENST00000335351 2456 ntAPPRIS P2 TSL 1 (best) BASIC21.65■■□□□ 1.06
NGFP01138 PARD6A-201ENST00000219255 1248 ntAPPRIS P3 TSL 1 (best) BASIC21.65■■□□□ 1.06
NGFP01138 CLTA-207ENST00000470744 1102 ntTSL 2 BASIC21.65■■□□□ 1.06
NGFP01138 CHST11-203ENST00000547956 936 ntTSL 2 BASIC21.64■■□□□ 1.05
NGFP01138 MBP-237ENST00000579129 1052 ntTSL 5 BASIC21.64■■□□□ 1.05
NGFP01138 C9orf40-201ENST00000376854 2327 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.05
NGFP01138 PSMG1-201ENST00000331573 2154 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.05
NGFP01138 APLP1-201ENST00000221891 2495 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.05
NGFP01138 S1PR4-201ENST00000246115 1565 ntAPPRIS P1 BASIC21.63■■□□□ 1.05
NGFP01138 RPS20-211ENST00000524349 752 ntTSL 1 (best) BASIC21.63■■□□□ 1.05
Retrieved 100 of 98,524 protein–RNA pairs in 18.8 ms