Protein–RNA interactions for Protein: O75382

TRIM3, Tripartite motif-containing protein 3, humanhuman

Predicted RBP Predictions only

Length 744 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM3O75382 GABRA5-203ENST00000400081 2761 ntAPPRIS P1 TSL 5 BASIC23.25■■□□□ 1.31
TRIM3O75382 POLR3H-201ENST00000337566 1330 ntTSL 1 (best) BASIC23.25■■□□□ 1.31
TRIM3O75382 ARL6IP4-211ENST00000454885 1318 ntAPPRIS ALT2 TSL 1 (best) BASIC23.25■■□□□ 1.31
TRIM3O75382 ZFPM1-201ENST00000319555 5380 ntAPPRIS P1 TSL 1 (best) BASIC23.24■■□□□ 1.31
TRIM3O75382 TSPAN3-203ENST00000424443 1530 ntTSL 2 BASIC23.24■■□□□ 1.31
TRIM3O75382 CENPV-201ENST00000299736 1165 ntAPPRIS P1 TSL 1 (best) BASIC23.24■■□□□ 1.31
TRIM3O75382 SURF1-201ENST00000371974 1093 ntAPPRIS P1 TSL 1 (best) BASIC23.24■■□□□ 1.31
TRIM3O75382 SURF1-205ENST00000615505 991 ntTSL 1 (best) BASIC23.24■■□□□ 1.31
TRIM3O75382 AC027237.3-202ENST00000558617 1778 ntTSL 2 BASIC23.24■■□□□ 1.31
TRIM3O75382 DNPEP-201ENST00000273075 2425 ntAPPRIS P3 TSL 1 (best) BASIC23.23■■□□□ 1.31
TRIM3O75382 TNFSF12-201ENST00000293825 1553 ntAPPRIS P1 TSL 1 (best) BASIC23.23■■□□□ 1.31
TRIM3O75382 FKBP1A-205ENST00000439640 1583 ntTSL 3 BASIC23.23■■□□□ 1.31
TRIM3O75382 TSPAN4-207ENST00000397411 1025 ntAPPRIS P1 TSL 2 BASIC23.23■■□□□ 1.31
TRIM3O75382 AC100797.4-201ENST00000631653 1827 ntBASIC23.23■■□□□ 1.31
TRIM3O75382 CDH24-206ENST00000610348 2037 ntTSL 1 (best) BASIC23.23■■□□□ 1.31
TRIM3O75382 S1PR4-201ENST00000246115 1565 ntAPPRIS P1 BASIC23.23■■□□□ 1.31
TRIM3O75382 ZNF775-201ENST00000329630 2257 ntAPPRIS P1 TSL 1 (best) BASIC23.22■■□□□ 1.31
TRIM3O75382 FHL2-202ENST00000344213 1769 ntTSL 1 (best) BASIC23.22■■□□□ 1.31
TRIM3O75382 ZFAND2B-208ENST00000409594 2021 ntTSL 2 BASIC23.22■■□□□ 1.31
TRIM3O75382 AC008813.1-201ENST00000536597 885 ntBASIC23.22■■□□□ 1.31
TRIM3O75382 PEX7-203ENST00000541292 945 ntTSL 5 BASIC23.22■■□□□ 1.31
TRIM3O75382 FEZ1-201ENST00000278919 1748 ntAPPRIS P1 TSL 1 (best) BASIC23.22■■□□□ 1.31
TRIM3O75382 THAP11-201ENST00000303596 2114 ntAPPRIS P1 BASIC23.21■■□□□ 1.31
TRIM3O75382 SNTB1-202ENST00000517992 2273 ntAPPRIS P1 TSL 1 (best) BASIC23.21■■□□□ 1.31
TRIM3O75382 CLTA-207ENST00000470744 1102 ntTSL 2 BASIC23.21■■□□□ 1.31
TRIM3O75382 NREP-216ENST00000508870 540 ntAPPRIS P1 TSL 4 BASIC23.21■■□□□ 1.31
TRIM3O75382 TMEM150A-202ENST00000334462 1518 ntAPPRIS P1 TSL 1 (best) BASIC23.21■■□□□ 1.31
TRIM3O75382 HOMER3-202ENST00000392351 1557 ntAPPRIS P3 TSL 1 (best) BASIC23.21■■□□□ 1.31
TRIM3O75382 LDLRAD4-218ENST00000592991 1640 ntTSL 1 (best) BASIC23.21■■□□□ 1.31
TRIM3O75382 TMEM55B-202ENST00000398020 1696 ntAPPRIS ALT1 TSL 1 (best) BASIC23.21■■□□□ 1.31
TRIM3O75382 ROM1-201ENST00000278833 1878 ntAPPRIS P2 TSL 1 (best) BASIC23.21■■□□□ 1.31
TRIM3O75382 LMO2-201ENST00000257818 2294 ntTSL 1 (best) BASIC23.21■■□□□ 1.31
TRIM3O75382 KCNJ4-201ENST00000303592 2065 ntAPPRIS P1 TSL 1 (best) BASIC23.2■■□□□ 1.3
TRIM3O75382 MYCL-202ENST00000372816 1688 ntAPPRIS P3 TSL 2 BASIC23.2■■□□□ 1.3
TRIM3O75382 C14orf80-203ENST00000354560 1553 ntAPPRIS ALT2 TSL 1 (best) BASIC23.2■■□□□ 1.3
TRIM3O75382 GRPEL2-204ENST00000513661 546 ntTSL 2 BASIC23.2■■□□□ 1.3
TRIM3O75382 TXNL4A-208ENST00000588162 752 ntTSL 2 BASIC23.2■■□□□ 1.3
TRIM3O75382 CCM2L-201ENST00000262659 2523 ntAPPRIS P1 TSL 1 (best) BASIC23.2■■□□□ 1.3
TRIM3O75382 COL13A1-213ENST00000520267 2276 ntAPPRIS ALT2 TSL 5 BASIC23.2■■□□□ 1.3
TRIM3O75382 F8A3-201ENST00000622749 1759 ntAPPRIS P1 BASIC23.19■■□□□ 1.3
TRIM3O75382 DCDC2C-201ENST00000399143 1476 ntAPPRIS P1 TSL 5 BASIC23.19■■□□□ 1.3
TRIM3O75382 IGFBPL1-201ENST00000377694 1093 ntAPPRIS P1 TSL 2 BASIC23.19■■□□□ 1.3
TRIM3O75382 AC009041.3-201ENST00000564390 879 ntTSL 5 BASIC23.19■■□□□ 1.3
TRIM3O75382 UBA52-204ENST00000595158 743 ntAPPRIS P1 TSL 3 BASIC23.19■■□□□ 1.3
TRIM3O75382 ACTR3B-201ENST00000256001 2216 ntAPPRIS P1 TSL 1 (best) BASIC23.18■■□□□ 1.3
TRIM3O75382 U2AF1-203ENST00000398137 1019 ntTSL 1 (best) BASIC23.18■■□□□ 1.3
TRIM3O75382 CLDND1-226ENST00000513287 999 ntAPPRIS P1 TSL 2 BASIC23.18■■□□□ 1.3
TRIM3O75382 RPS20-211ENST00000524349 752 ntTSL 1 (best) BASIC23.18■■□□□ 1.3
TRIM3O75382 LINC01896-206ENST00000575722 1256 ntTSL 2 BASIC23.18■■□□□ 1.3
TRIM3O75382 U2AF1L5-212ENST00000639996 1019 ntTSL 1 (best) BASIC23.18■■□□□ 1.3
TRIM3O75382 NREP-202ENST00000379671 2581 ntAPPRIS P1 TSL 1 (best) BASIC23.18■■□□□ 1.3
TRIM3O75382 RUNDC3A-201ENST00000225441 1821 ntTSL 1 (best) BASIC23.17■■□□□ 1.3
TRIM3O75382 NAPA-201ENST00000263354 1839 ntAPPRIS P1 TSL 1 (best) BASIC23.17■■□□□ 1.3
TRIM3O75382 TLE6-201ENST00000246112 2100 ntAPPRIS ALT2 TSL 1 (best) BASIC23.17■■□□□ 1.3
TRIM3O75382 PLPPR3-201ENST00000359894 2387 ntAPPRIS P3 TSL 1 (best) BASIC23.17■■□□□ 1.3
TRIM3O75382 U2AF1-201ENST00000291552 962 ntAPPRIS P3 TSL 1 (best) BASIC23.17■■□□□ 1.3
TRIM3O75382 RPS2-210ENST00000530225 765 ntTSL 2 BASIC23.17■■□□□ 1.3
TRIM3O75382 U2AF1L5-202ENST00000619610 813 ntAPPRIS ALT2 TSL 1 (best) BASIC23.17■■□□□ 1.3
TRIM3O75382 R3HDM4-208ENST00000626716 138 ntTSL 5 BASIC23.17■■□□□ 1.3
TRIM3O75382 TAZ-201ENST00000369776 1596 ntTSL 1 (best) BASIC23.17■■□□□ 1.3
TRIM3O75382 AC073111.5-206ENST00000642087 859 ntAPPRIS P1 BASIC23.16■■□□□ 1.3
TRIM3O75382 SSBP3-202ENST00000357475 1533 ntTSL 1 (best) BASIC23.16■■□□□ 1.3
TRIM3O75382 PCYT2-203ENST00000538936 5147 ntTSL 1 (best) BASIC23.15■■□□□ 1.3
TRIM3O75382 TNFRSF25-205ENST00000377782 1632 ntAPPRIS P4 TSL 1 (best) BASIC23.15■■□□□ 1.3
TRIM3O75382 VEGFA-202ENST00000324450 954 ntTSL 1 (best) BASIC23.14■■□□□ 1.29
TRIM3O75382 VEGFA-203ENST00000372055 1286 ntTSL 1 (best) BASIC23.14■■□□□ 1.29
TRIM3O75382 VEGFA-213ENST00000482630 1146 ntTSL 1 (best) BASIC23.14■■□□□ 1.29
TRIM3O75382 VEGFA-227ENST00000615393 984 ntTSL 1 (best) BASIC23.14■■□□□ 1.29
TRIM3O75382 VEGFA-228ENST00000617771 1116 ntTSL 1 (best) BASIC23.14■■□□□ 1.29
TRIM3O75382 VEGFA-229ENST00000621747 1116 ntAPPRIS ALT2 TSL 1 (best) BASIC23.14■■□□□ 1.29
TRIM3O75382 VEGFA-230ENST00000640482 1065 ntAPPRIS ALT2 TSL 1 (best) BASIC23.14■■□□□ 1.29
TRIM3O75382 VEGFA-232ENST00000640653 1170 ntAPPRIS ALT2 TSL 1 (best) BASIC23.14■■□□□ 1.29
TRIM3O75382 MTCH1-201ENST00000373616 2006 ntTSL 1 (best) BASIC23.14■■□□□ 1.29
TRIM3O75382 LACTB-201ENST00000261893 1972 ntAPPRIS P1 TSL 1 (best) BASIC23.14■■□□□ 1.29
TRIM3O75382 SHF-207ENST00000560540 2062 ntTSL 5 BASIC23.13■■□□□ 1.29
TRIM3O75382 PCSK6-216ENST00000615296 2921 ntTSL 5 BASIC23.13■■□□□ 1.29
TRIM3O75382 CHST14-202ENST00000559991 1968 ntTSL 5 BASIC23.12■■□□□ 1.29
TRIM3O75382 DEAF1-201ENST00000382409 2500 ntAPPRIS P1 TSL 1 (best) BASIC23.12■■□□□ 1.29
TRIM3O75382 LAGE3-201ENST00000357360 949 ntAPPRIS P1 TSL 1 (best) BASIC23.12■■□□□ 1.29
TRIM3O75382 TAZ-205ENST00000475699 1862 ntTSL 1 (best) BASIC23.12■■□□□ 1.29
TRIM3O75382 CRNDE-206ENST00000559432 587 ntTSL 3 BASIC23.12■■□□□ 1.29
TRIM3O75382 CLK2-201ENST00000355560 2120 ntAPPRIS ALT1 TSL 5 BASIC23.12■■□□□ 1.29
TRIM3O75382 EMID1-203ENST00000404820 2118 ntTSL 5 BASIC23.12■■□□□ 1.29
TRIM3O75382 AC016595.1-201ENST00000559410 383 ntTSL 3 BASIC23.11■■□□□ 1.29
TRIM3O75382 COMMD7-201ENST00000278980 1900 ntAPPRIS P3 TSL 1 (best) BASIC23.11■■□□□ 1.29
TRIM3O75382 ANKS1B-203ENST00000341752 2115 ntTSL 2 BASIC23.11■■□□□ 1.29
TRIM3O75382 GPR75-ASB3-201ENST00000406625 2113 ntAPPRIS P1 TSL 2 BASIC23.11■■□□□ 1.29
TRIM3O75382 TMEM185A-207ENST00000600449 2840 ntAPPRIS P1 TSL 1 (best) BASIC23.1■■□□□ 1.29
TRIM3O75382 HMCES-202ENST00000389735 1763 ntAPPRIS P1 TSL 1 (best) BASIC23.1■■□□□ 1.29
TRIM3O75382 BOK-AS1-201ENST00000434306 643 ntTSL 1 (best) BASIC23.1■■□□□ 1.29
TRIM3O75382 C16orf74-204ENST00000602719 1002 ntAPPRIS ALT2 TSL 3 BASIC23.1■■□□□ 1.29
TRIM3O75382 GSR-206ENST00000546342 1482 ntAPPRIS ALT2 TSL 1 (best) BASIC23.1■■□□□ 1.29
TRIM3O75382 NRBF2-202ENST00000435510 1816 ntTSL 2 BASIC23.1■■□□□ 1.29
TRIM3O75382 WSB2-201ENST00000315436 2646 ntAPPRIS P1 TSL 1 (best) BASIC23.1■■□□□ 1.29
TRIM3O75382 SMARCD3-203ENST00000392811 2018 ntTSL 1 (best) BASIC23.09■■□□□ 1.29
TRIM3O75382 SLC35A1-203ENST00000369557 1653 ntTSL 2 BASIC23.09■■□□□ 1.29
TRIM3O75382 CHST11-203ENST00000547956 936 ntTSL 2 BASIC23.09■■□□□ 1.29
TRIM3O75382 AC148477.6-201ENST00000623746 465 ntBASIC23.09■■□□□ 1.29
TRIM3O75382 SRP68-213ENST00000629930 165 ntTSL 5 BASIC23.09■■□□□ 1.29
TRIM3O75382 SNX15-202ENST00000377244 1939 ntAPPRIS P1 TSL 1 (best) BASIC23.09■■□□□ 1.29
Retrieved 100 of 98,524 protein–RNA pairs in 86.3 ms