Protein–RNA interactions for Protein: O60716

CTNND1, Catenin delta-1, humanhuman

Known RBP Predictions only

Length 968 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CTNND1O60716 MIR1-1HG-202ENST00000624914 1220 ntTSL 1 (best) BASIC29.77■■■□□ 2.36
CTNND1O60716 AGAP3-211ENST00000473312 2039 ntTSL 1 (best) BASIC29.77■■■□□ 2.36
CTNND1O60716 SLC15A4-201ENST00000266771 2779 ntAPPRIS P1 TSL 1 (best) BASIC29.77■■■□□ 2.36
CTNND1O60716 SLC9A3-AS1-207ENST00000607286 1357 ntTSL 5 BASIC29.77■■■□□ 2.36
CTNND1O60716 TFEB-204ENST00000373033 2331 ntAPPRIS P1 TSL 1 (best) BASIC29.76■■■□□ 2.35
CTNND1O60716 DPF1-204ENST00000416611 2341 ntTSL 5 BASIC29.76■■■□□ 2.35
CTNND1O60716 AL157400.5-201ENST00000507624 621 ntBASIC29.76■■■□□ 2.35
CTNND1O60716 FOXO6-202ENST00000641094 1476 ntAPPRIS P1 BASIC29.75■■■□□ 2.35
CTNND1O60716 TPRG1L-202ENST00000378344 2414 ntAPPRIS P1 TSL 2 BASIC29.75■■■□□ 2.35
CTNND1O60716 ST7-205ENST00000393446 2114 ntTSL 5 BASIC29.75■■■□□ 2.35
CTNND1O60716 TAZ-215ENST00000612460 1793 ntAPPRIS P1 TSL 1 (best) BASIC29.75■■■□□ 2.35
CTNND1O60716 DHRS13-203ENST00000426464 1569 ntTSL 2 BASIC29.74■■■□□ 2.35
CTNND1O60716 KCNG2-201ENST00000316249 1401 ntAPPRIS P1 TSL 1 (best) BASIC29.74■■■□□ 2.35
CTNND1O60716 TSPY13P-201ENST00000338964 914 ntBASIC29.74■■■□□ 2.35
CTNND1O60716 QDPR-208ENST00000513615 1188 ntTSL 2 BASIC29.74■■■□□ 2.35
CTNND1O60716 C19orf12-207ENST00000592153 1504 ntTSL 1 (best) BASIC29.74■■■□□ 2.35
CTNND1O60716 ZDHHC3-203ENST00000342790 1336 ntTSL 5 BASIC29.73■■■□□ 2.35
CTNND1O60716 GPR25-201ENST00000304244 1224 ntAPPRIS P1 BASIC29.73■■■□□ 2.35
CTNND1O60716 LOR-201ENST00000368742 1230 ntAPPRIS P1 TSL 1 (best) BASIC29.73■■■□□ 2.35
CTNND1O60716 TSPAN33-201ENST00000486685 1863 ntAPPRIS P1 TSL 1 (best) BASIC29.73■■■□□ 2.35
CTNND1O60716 SLC25A23-203ENST00000334510 1424 ntTSL 1 (best) BASIC29.72■■■□□ 2.35
CTNND1O60716 GSR-205ENST00000541648 1410 ntTSL 1 (best) BASIC29.72■■■□□ 2.35
CTNND1O60716 LDLRAD4-218ENST00000592991 1640 ntTSL 1 (best) BASIC29.72■■■□□ 2.35
CTNND1O60716 AC004987.1-201ENST00000428627 508 ntBASIC29.72■■■□□ 2.35
CTNND1O60716 ARL6IP4-208ENST00000439686 796 ntAPPRIS ALT2 TSL 3 BASIC29.72■■■□□ 2.35
CTNND1O60716 AC107214.1-201ENST00000457303 559 ntTSL 1 (best) BASIC29.72■■■□□ 2.35
CTNND1O60716 AC100797.4-201ENST00000631653 1827 ntBASIC29.72■■■□□ 2.35
CTNND1O60716 FAM78B-201ENST00000338353 1597 ntAPPRIS P1 TSL 1 (best) BASIC29.72■■■□□ 2.35
CTNND1O60716 ATP5G2P3-201ENST00000429083 425 ntBASIC29.71■■■□□ 2.35
CTNND1O60716 BCAP31-201ENST00000345046 1589 ntAPPRIS P1 TSL 1 (best) BASIC29.71■■■□□ 2.35
CTNND1O60716 NSMCE4A-201ENST00000369017 1224 ntTSL 1 (best) BASIC29.7■■■□□ 2.35
CTNND1O60716 LTC4S-205ENST00000486713 496 ntTSL 2 BASIC29.7■■■□□ 2.35
CTNND1O60716 GFER-205ENST00000569451 517 ntTSL 5 BASIC29.69■■■□□ 2.34
CTNND1O60716 FKBP1A-205ENST00000439640 1583 ntTSL 3 BASIC29.69■■■□□ 2.34
CTNND1O60716 ACOT7-201ENST00000361521 2429 ntAPPRIS ALT2 TSL 1 (best) BASIC29.69■■■□□ 2.34
CTNND1O60716 ATF4-201ENST00000337304 2019 ntAPPRIS P1 TSL 1 (best) BASIC29.68■■■□□ 2.34
CTNND1O60716 ST7-202ENST00000323984 2142 ntTSL 5 BASIC29.68■■■□□ 2.34
CTNND1O60716 ST7-207ENST00000393449 2127 ntTSL 5 BASIC29.68■■■□□ 2.34
CTNND1O60716 PPP1R14A-201ENST00000301242 777 ntAPPRIS P1 TSL 1 (best) BASIC29.67■■■□□ 2.34
CTNND1O60716 LINC01770-201ENST00000417917 634 ntTSL 2 BASIC29.67■■■□□ 2.34
CTNND1O60716 CCDC37-AS1-202ENST00000506660 986 ntTSL 1 (best) BASIC29.67■■■□□ 2.34
CTNND1O60716 RAB4B-203ENST00000594800 1173 ntAPPRIS P1 TSL 5 BASIC29.67■■■□□ 2.34
CTNND1O60716 PHF20L1-207ENST00000395379 1998 ntTSL 5 BASIC29.66■■■□□ 2.34
CTNND1O60716 HOXB3-212ENST00000498678 2196 ntAPPRIS P1 TSL 2 BASIC29.66■■■□□ 2.34
CTNND1O60716 COL13A1-210ENST00000517713 2007 ntAPPRIS ALT2 TSL 5 BASIC29.66■■■□□ 2.34
CTNND1O60716 SNX15-202ENST00000377244 1939 ntAPPRIS P1 TSL 1 (best) BASIC29.66■■■□□ 2.34
CTNND1O60716 NRBF2-202ENST00000435510 1816 ntTSL 2 BASIC29.66■■■□□ 2.34
CTNND1O60716 AL121987.2-201ENST00000418602 1578 ntTSL 2 BASIC29.65■■■□□ 2.34
CTNND1O60716 C20orf24-201ENST00000342422 896 ntTSL 2 BASIC29.65■■■□□ 2.34
CTNND1O60716 C20orf24-202ENST00000344795 1114 ntAPPRIS P1 TSL 1 (best) BASIC29.65■■■□□ 2.34
CTNND1O60716 PSMG4-207ENST00000451246 824 ntTSL 3 BASIC29.65■■■□□ 2.34
CTNND1O60716 C16orf52-207ENST00000569656 1257 ntTSL 5 BASIC29.65■■■□□ 2.34
CTNND1O60716 HOMER3-207ENST00000594794 903 ntTSL 5 BASIC29.65■■■□□ 2.34
CTNND1O60716 AC007029.1-201ENST00000604183 313 ntBASIC29.65■■■□□ 2.34
CTNND1O60716 YAP1-204ENST00000526343 2393 ntTSL 5 BASIC29.65■■■□□ 2.34
CTNND1O60716 PHF23-201ENST00000320316 2037 ntAPPRIS P1 TSL 1 (best) BASIC29.65■■■□□ 2.34
CTNND1O60716 MRPL4-201ENST00000253099 1455 ntAPPRIS P2 TSL 1 (best) BASIC29.65■■■□□ 2.34
CTNND1O60716 CERS2-201ENST00000271688 2544 ntAPPRIS P1 TSL 5 BASIC29.64■■■□□ 2.34
CTNND1O60716 ZNF513-201ENST00000323703 2139 ntAPPRIS P1 TSL 1 (best) BASIC29.64■■■□□ 2.34
CTNND1O60716 AC010907.1-201ENST00000441632 807 ntTSL 3 BASIC29.64■■■□□ 2.34
CTNND1O60716 DNPEP-201ENST00000273075 2425 ntAPPRIS P3 TSL 1 (best) BASIC29.64■■■□□ 2.34
CTNND1O60716 REST-210ENST00000638187 1334 ntTSL 5 BASIC29.64■■■□□ 2.34
CTNND1O60716 LYPD6B-204ENST00000409876 1248 ntAPPRIS ALT2 TSL 1 (best) BASIC29.63■■■□□ 2.33
CTNND1O60716 VIPR2-204ENST00000421760 717 ntTSL 3 BASIC29.63■■■□□ 2.33
CTNND1O60716 FLVCR1-AS1-203ENST00000426161 892 ntTSL 1 (best) BASIC29.63■■■□□ 2.33
CTNND1O60716 RPL27A-206ENST00000530022 878 ntTSL 1 (best) BASIC29.63■■■□□ 2.33
CTNND1O60716 FAM222B-205ENST00000577682 549 ntTSL 4 BASIC29.63■■■□□ 2.33
CTNND1O60716 SOWAHD-201ENST00000343905 1552 ntAPPRIS P1 BASIC29.63■■■□□ 2.33
CTNND1O60716 MPP6-203ENST00000409761 1703 ntTSL 5 BASIC29.62■■■□□ 2.33
CTNND1O60716 MZT2B-201ENST00000281871 933 ntAPPRIS P3 TSL 1 (best) BASIC29.62■■■□□ 2.33
CTNND1O60716 MZT2A-201ENST00000309451 624 ntAPPRIS P1 TSL 1 (best) BASIC29.62■■■□□ 2.33
CTNND1O60716 GUK1-208ENST00000366728 842 ntTSL 2 BASIC29.62■■■□□ 2.33
CTNND1O60716 PRRX2-201ENST00000372469 1311 ntAPPRIS P1 TSL 1 (best) BASIC29.62■■■□□ 2.33
CTNND1O60716 KLF16-204ENST00000617223 1133 ntAPPRIS P1 TSL 1 (best) BASIC29.6■■■□□ 2.33
CTNND1O60716 MAPK3-203ENST00000395199 1074 ntAPPRIS ALT2 TSL 1 (best) BASIC29.59■■■□□ 2.33
CTNND1O60716 CAPNS1-216ENST00000628306 1389 ntTSL 5 BASIC29.59■■■□□ 2.33
CTNND1O60716 AL359258.2-201ENST00000564063 1566 ntBASIC29.59■■■□□ 2.33
CTNND1O60716 CCDC88C-205ENST00000553403 1651 ntTSL 1 (best) BASIC29.59■■■□□ 2.33
CTNND1O60716 TBX1-201ENST00000329705 1465 ntAPPRIS ALT2 TSL 1 (best) BASIC29.58■■■□□ 2.33
CTNND1O60716 MXD3-208ENST00000513063 861 ntAPPRIS P1 TSL 5 BASIC29.58■■■□□ 2.33
CTNND1O60716 GSR-206ENST00000546342 1482 ntAPPRIS ALT2 TSL 1 (best) BASIC29.58■■■□□ 2.33
CTNND1O60716 SMPD5-203ENST00000639008 1464 ntBASIC29.58■■■□□ 2.33
CTNND1O60716 DSG2-202ENST00000585206 1081 ntTSL 2 BASIC29.57■■■□□ 2.32
CTNND1O60716 FGF18-201ENST00000274625 1986 ntAPPRIS P1 TSL 1 (best) BASIC29.57■■■□□ 2.32
CTNND1O60716 MYCL-202ENST00000372816 1688 ntAPPRIS P3 TSL 2 BASIC29.56■■■□□ 2.32
CTNND1O60716 EMC10-206ENST00000598585 1610 ntAPPRIS ALT2 TSL 5 BASIC29.56■■■□□ 2.32
CTNND1O60716 ARPC2-202ENST00000315717 1505 ntAPPRIS P1 TSL 1 (best) BASIC29.56■■■□□ 2.32
CTNND1O60716 IFI30-201ENST00000407280 1134 ntAPPRIS P1 TSL 1 (best) BASIC29.56■■■□□ 2.32
CTNND1O60716 UBE2I-213ENST00000566587 1098 ntAPPRIS P1 TSL 2 BASIC29.56■■■□□ 2.32
CTNND1O60716 TXNRD2-205ENST00000400525 1874 ntTSL 5 BASIC29.56■■■□□ 2.32
CTNND1O60716 PPP1CC-208ENST00000551676 1581 ntTSL 2 BASIC29.56■■■□□ 2.32
CTNND1O60716 FHL2-202ENST00000344213 1769 ntTSL 1 (best) BASIC29.55■■■□□ 2.32
CTNND1O60716 TPM2-203ENST00000378292 2147 ntAPPRIS ALT1 TSL 1 (best) BASIC29.55■■■□□ 2.32
CTNND1O60716 AC133552.2-201ENST00000619106 1032 ntBASIC29.55■■■□□ 2.32
CTNND1O60716 RAMP2-AS1-202ENST00000589716 1985 ntTSL 5 BASIC29.55■■■□□ 2.32
CTNND1O60716 AC009831.1-201ENST00000580420 1582 ntBASIC29.55■■■□□ 2.32
CTNND1O60716 TTC36-201ENST00000302783 874 ntAPPRIS P1 TSL 1 (best) BASIC29.54■■■□□ 2.32
CTNND1O60716 TNFRSF12A-201ENST00000326577 1033 ntAPPRIS P1 TSL 1 (best) BASIC29.54■■■□□ 2.32
CTNND1O60716 OXLD1-201ENST00000374741 620 ntAPPRIS P1 TSL 1 (best) BASIC29.54■■■□□ 2.32
CTNND1O60716 AC129492.7-201ENST00000622992 756 ntBASIC29.54■■■□□ 2.32
Retrieved 100 of 98,524 protein–RNA pairs in 90.6 ms