Protein–RNA interactions for Protein: O60225

SSX5, Protein SSX5, humanhuman

Predictions only

Length 188 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SSX5O60225 MORF4L1-202ENST00000379535 2274 ntTSL 2 BASIC21.35■■□□□ 1.01
SSX5O60225 CDPF1-201ENST00000314567 1875 ntAPPRIS P2 TSL 1 (best) BASIC21.35■■□□□ 1.01
SSX5O60225 EBF4-210ENST00000609451 2012 ntAPPRIS ALT1 TSL 5 BASIC21.34■■□□□ 1.01
SSX5O60225 P2RY2-202ENST00000393596 2174 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
SSX5O60225 RPUSD1-208ENST00000567114 1835 ntTSL 2 BASIC21.34■■□□□ 1.01
SSX5O60225 HTR6-201ENST00000289753 1984 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
SSX5O60225 TTBK2-207ENST00000567840 1961 ntTSL 1 (best) BASIC21.34■■□□□ 1.01
SSX5O60225 MNX1-207ENST00000543409 1620 ntAPPRIS ALT2 TSL 1 (best) BASIC21.34■■□□□ 1.01
SSX5O60225 PTPRM-201ENST00000332175 6095 ntAPPRIS P3 TSL 1 (best) BASIC21.34■■□□□ 1.01
SSX5O60225 RAD21-AS1-201ENST00000521487 2010 ntTSL 1 (best) BASIC21.34■■□□□ 1.01
SSX5O60225 SNAI3-AS1-204ENST00000567997 2048 ntBASIC21.34■■□□□ 1.01
SSX5O60225 LFNG-203ENST00000359574 1377 ntAPPRIS ALT1 TSL 1 (best) BASIC21.34■■□□□ 1.01
SSX5O60225 FAM57A-202ENST00000308278 2412 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
SSX5O60225 HOXB3-211ENST00000490677 1109 ntTSL 1 (best) BASIC21.33■■□□□ 1.01
SSX5O60225 CAHM-201ENST00000604200 896 ntBASIC21.33■■□□□ 1.01
SSX5O60225 SH3GL1-201ENST00000269886 2516 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1
SSX5O60225 NAT8L-202ENST00000423729 5870 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1
SSX5O60225 NRARP-201ENST00000356628 1770 ntAPPRIS P1 BASIC21.33■■□□□ 1
SSX5O60225 GSR-206ENST00000546342 1482 ntAPPRIS ALT2 TSL 1 (best) BASIC21.32■■□□□ 1
SSX5O60225 CCND3-202ENST00000372988 2133 ntTSL 1 (best) BASIC21.32■■□□□ 1
SSX5O60225 IRAK1-205ENST00000429936 2127 ntTSL 5 BASIC21.32■■□□□ 1
SSX5O60225 MAZ-205ENST00000562337 1574 ntTSL 3 BASIC21.32■■□□□ 1
SSX5O60225 NRXN1-205ENST00000401710 2873 ntTSL 5 BASIC21.32■■□□□ 1
SSX5O60225 MKRN1-202ENST00000443720 1601 ntAPPRIS ALT2 TSL 1 (best) BASIC21.32■■□□□ 1
SSX5O60225 FOXA3-201ENST00000302177 1989 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
SSX5O60225 RASL10A-202ENST00000401450 1720 ntTSL 2 BASIC21.32■■□□□ 1
SSX5O60225 DHFR-203ENST00000505337 1719 ntAPPRIS P1 TSL 2 BASIC21.32■■□□□ 1
SSX5O60225 MBOAT7-201ENST00000245615 2529 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
SSX5O60225 VEGFA-231ENST00000640499 1188 ntAPPRIS P3 TSL 1 (best) BASIC21.31■■□□□ 1
SSX5O60225 BBC3-204ENST00000449228 1827 ntTSL 1 (best) BASIC21.31■■□□□ 1
SSX5O60225 FLT1-202ENST00000539099 1911 ntTSL 1 (best) BASIC21.31■■□□□ 1
SSX5O60225 PHLPP1-201ENST00000262719 6390 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
SSX5O60225 AC018358.1-201ENST00000631079 1402 ntBASIC21.3■■□□□ 1
SSX5O60225 SPG21-201ENST00000204566 1822 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
SSX5O60225 C8orf58-202ENST00000409586 2021 ntAPPRIS ALT2 TSL 2 BASIC21.3■■□□□ 1
SSX5O60225 KLF3-AS1-202ENST00000440181 2368 ntTSL 2 BASIC21.3■■□□□ 1
SSX5O60225 TBL1X-201ENST00000217964 5871 ntTSL 1 (best) BASIC21.3■■□□□ 1
SSX5O60225 TSEN34-204ENST00000429671 1912 ntTSL 2 BASIC21.29■■□□□ 1
SSX5O60225 PLD4-201ENST00000392593 6515 ntAPPRIS P3 TSL 1 (best) BASIC21.29■■□□□ 1
SSX5O60225 CTU1-201ENST00000421832 2087 ntAPPRIS P1 TSL 2 BASIC21.29■■□□□ 1
SSX5O60225 HSD11B1L-202ENST00000339423 1660 ntAPPRIS P3 TSL 1 (best) BASIC21.29■■□□□ 1
SSX5O60225 C14orf80-202ENST00000334656 1358 ntAPPRIS ALT2 TSL 2 BASIC21.29■■□□□ 1
SSX5O60225 FGF3-201ENST00000334134 892 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
SSX5O60225 POU2F2-208ENST00000529952 1716 ntAPPRIS ALT2 TSL 1 (best) BASIC21.28■■□□□ 1
SSX5O60225 MAZ-202ENST00000322945 2532 ntAPPRIS ALT2 TSL 1 (best) BASIC21.28■■□□□ 1
SSX5O60225 SLCO3A1-201ENST00000318445 5115 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
SSX5O60225 FAM120AOS-202ENST00000423591 1800 ntAPPRIS ALT2 TSL 1 (best) BASIC21.27■■□□□ 1
SSX5O60225 GATA4-209ENST00000622443 1982 ntTSL 5 BASIC21.27■■□□□ 1
SSX5O60225 SCX-201ENST00000567180 999 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
SSX5O60225 AP000547.3-202ENST00000592107 1019 ntTSL 1 (best) BASIC21.27■■□□□ 1
SSX5O60225 AC009690.3-201ENST00000569547 1902 ntAPPRIS P1 TSL 2 BASIC21.27■■□□□ 1
SSX5O60225 MAZ-201ENST00000219782 2698 ntAPPRIS P4 TSL 1 (best) BASIC21.27■■□□□ 1
SSX5O60225 ACSS1-202ENST00000376726 2244 ntTSL 2 BASIC21.27■□□□□ 0.99
SSX5O60225 MEST-211ENST00000437945 1455 ntTSL 5 BASIC21.26■□□□□ 0.99
SSX5O60225 PPP1R14C-201ENST00000361131 2152 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
SSX5O60225 DUSP15-202ENST00000339738 1454 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
SSX5O60225 LRRC75B-201ENST00000318753 1238 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
SSX5O60225 ALG2-203ENST00000476832 1880 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
SSX5O60225 PPM1B-202ENST00000345249 1713 ntTSL 1 (best) BASIC21.24■□□□□ 0.99
SSX5O60225 FBXL8-206ENST00000519917 1460 ntAPPRIS P1 TSL 5 BASIC21.24■□□□□ 0.99
SSX5O60225 SNX15-202ENST00000377244 1939 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
SSX5O60225 HSF1-204ENST00000528838 2142 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
SSX5O60225 KLC2-205ENST00000394078 1557 ntTSL 5 BASIC21.23■□□□□ 0.99
SSX5O60225 NADK2-210ENST00000514504 1233 ntTSL 5 BASIC21.23■□□□□ 0.99
SSX5O60225 LANCL3-203ENST00000614025 1469 ntTSL 2 BASIC21.23■□□□□ 0.99
SSX5O60225 DNAH9-209ENST00000579828 1986 ntTSL 2 BASIC21.23■□□□□ 0.99
SSX5O60225 AC145676.1-201ENST00000514988 2004 ntBASIC21.22■□□□□ 0.99
SSX5O60225 AC135983.2-203ENST00000454486 1613 ntBASIC21.22■□□□□ 0.99
SSX5O60225 AC006486.1-201ENST00000594664 634 ntAPPRIS P1 TSL 3 BASIC21.22■□□□□ 0.99
SSX5O60225 ANKRD53-203ENST00000441349 1797 ntTSL 5 BASIC21.22■□□□□ 0.99
SSX5O60225 NKX2-1-204ENST00000522719 1417 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
SSX5O60225 C16orf59-202ENST00000483320 1709 ntAPPRIS ALT2 TSL 2 BASIC21.21■□□□□ 0.99
SSX5O60225 C8orf58-206ENST00000614574 1955 ntAPPRIS ALT2 TSL 5 BASIC21.21■□□□□ 0.99
SSX5O60225 NRBF2-202ENST00000435510 1816 ntTSL 2 BASIC21.2■□□□□ 0.98
SSX5O60225 AC136428.2-201ENST00000563187 214 ntBASIC21.2■□□□□ 0.98
SSX5O60225 HIST2H3C-201ENST00000369158 1656 ntAPPRIS P1 BASIC21.2■□□□□ 0.98
SSX5O60225 HIST2H3A-201ENST00000403683 1656 ntAPPRIS P1 BASIC21.2■□□□□ 0.98
SSX5O60225 AC020928.2-201ENST00000588717 2197 ntBASIC21.2■□□□□ 0.98
SSX5O60225 SNX5-201ENST00000377759 2270 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
SSX5O60225 LINC00588-201ENST00000521663 1875 ntTSL 2 BASIC21.2■□□□□ 0.98
SSX5O60225 TIGD3-201ENST00000309880 2012 ntAPPRIS P1 TSL 2 BASIC21.19■□□□□ 0.98
SSX5O60225 SYT12-205ENST00000527043 1661 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
SSX5O60225 KLC1-203ENST00000347839 2271 ntTSL 5 BASIC21.19■□□□□ 0.98
SSX5O60225 MISP3-201ENST00000269720 1424 ntAPPRIS ALT2 TSL 5 BASIC21.19■□□□□ 0.98
SSX5O60225 FANCE-201ENST00000229769 2554 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
SSX5O60225 VSIG8-201ENST00000368100 1818 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
SSX5O60225 SIN3B-209ENST00000596802 2556 ntTSL 1 (best) BASIC21.18■□□□□ 0.98
SSX5O60225 DLX2-202ENST00000466293 1852 ntTSL 2 BASIC21.18■□□□□ 0.98
SSX5O60225 PICALM-224ENST00000630913 2261 ntTSL 5 BASIC21.18■□□□□ 0.98
SSX5O60225 SP5-201ENST00000375281 2033 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
SSX5O60225 CUEDC1-202ENST00000407144 2190 ntAPPRIS P1 TSL 5 BASIC21.17■□□□□ 0.98
SSX5O60225 AC012629.2-201ENST00000606513 377 ntTSL 5 BASIC21.17■□□□□ 0.98
SSX5O60225 WHAMMP2-203ENST00000563942 1603 ntBASIC21.17■□□□□ 0.98
SSX5O60225 ANKS3-203ENST00000450067 2272 ntTSL 5 BASIC21.17■□□□□ 0.98
SSX5O60225 SHD-201ENST00000543264 2577 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
SSX5O60225 NPAS3-203ENST00000357798 2763 ntAPPRIS ALT2 TSL 1 (best) BASIC21.16■□□□□ 0.98
SSX5O60225 BTBD6-204ENST00000463376 2195 ntAPPRIS ALT2 TSL 2 BASIC21.16■□□□□ 0.98
SSX5O60225 CNNM2-201ENST00000369875 2059 ntTSL 1 (best) BASIC21.16■□□□□ 0.98
SSX5O60225 TM9SF3-201ENST00000371142 6141 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
SSX5O60225 DVL3-201ENST00000313143 5254 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
Retrieved 100 of 98,524 protein–RNA pairs in 22.3 ms