Protein–RNA interactions for Protein: O14917

PCDH17, Protocadherin-17, humanhuman

Predictions only

Length 1,159 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDH17O14917 HSD11B1L-202ENST00000339423 1660 ntAPPRIS P3 TSL 1 (best) BASIC23.93■■□□□ 1.42
PCDH17O14917 CHST14-202ENST00000559991 1968 ntTSL 5 BASIC23.93■■□□□ 1.42
PCDH17O14917 LINC01896-206ENST00000575722 1256 ntTSL 2 BASIC23.93■■□□□ 1.42
PCDH17O14917 HSD17B1P1-201ENST00000590052 955 ntBASIC23.93■■□□□ 1.42
PCDH17O14917 TNFRSF25-204ENST00000356876 1625 ntAPPRIS ALT2 TSL 1 (best) BASIC23.92■■□□□ 1.42
PCDH17O14917 UBA52-204ENST00000595158 743 ntAPPRIS P1 TSL 3 BASIC23.92■■□□□ 1.42
PCDH17O14917 SLC16A11-201ENST00000308009 1803 ntAPPRIS P2 TSL 1 (best) BASIC23.91■■□□□ 1.42
PCDH17O14917 CIB2-201ENST00000258930 1598 ntAPPRIS P1 TSL 1 (best) BASIC23.91■■□□□ 1.42
PCDH17O14917 RASL10A-202ENST00000401450 1720 ntTSL 2 BASIC23.91■■□□□ 1.42
PCDH17O14917 CLTA-207ENST00000470744 1102 ntTSL 2 BASIC23.91■■□□□ 1.42
PCDH17O14917 CRNDE-206ENST00000559432 587 ntTSL 3 BASIC23.91■■□□□ 1.42
PCDH17O14917 TXNL4A-208ENST00000588162 752 ntTSL 2 BASIC23.91■■□□□ 1.42
PCDH17O14917 EID2-201ENST00000390658 1629 ntAPPRIS P1 BASIC23.91■■□□□ 1.42
PCDH17O14917 MAZ-205ENST00000562337 1574 ntTSL 3 BASIC23.91■■□□□ 1.42
PCDH17O14917 AC016595.1-201ENST00000559410 383 ntTSL 3 BASIC23.9■■□□□ 1.42
PCDH17O14917 MAPKAPK2-201ENST00000294981 2171 ntTSL 1 (best) BASIC23.9■■□□□ 1.42
PCDH17O14917 AC110285.7-201ENST00000624417 1536 ntBASIC23.89■■□□□ 1.42
PCDH17O14917 WTAP-206ENST00000621533 2109 ntAPPRIS P1 TSL 2 BASIC23.89■■□□□ 1.41
PCDH17O14917 CCDC160-202ENST00000517294 1790 ntAPPRIS P1 TSL 5 BASIC23.88■■□□□ 1.41
PCDH17O14917 ZNF470-206ENST00000601902 1640 ntTSL 1 (best) BASIC23.88■■□□□ 1.41
PCDH17O14917 JAG2-201ENST00000331782 5835 ntAPPRIS P1 TSL 1 (best) BASIC23.88■■□□□ 1.41
PCDH17O14917 AC073111.5-206ENST00000642087 859 ntAPPRIS P1 BASIC23.88■■□□□ 1.41
PCDH17O14917 C14orf80-203ENST00000354560 1553 ntAPPRIS ALT2 TSL 1 (best) BASIC23.87■■□□□ 1.41
PCDH17O14917 FTCD-201ENST00000291670 1905 ntAPPRIS P1 TSL 1 (best) BASIC23.87■■□□□ 1.41
PCDH17O14917 U2AF1-201ENST00000291552 962 ntAPPRIS P3 TSL 1 (best) BASIC23.87■■□□□ 1.41
PCDH17O14917 AC009041.3-201ENST00000564390 879 ntTSL 5 BASIC23.87■■□□□ 1.41
PCDH17O14917 U2AF1L5-202ENST00000619610 813 ntAPPRIS ALT2 TSL 1 (best) BASIC23.87■■□□□ 1.41
PCDH17O14917 RCOR3-202ENST00000367006 2525 ntTSL 1 (best) BASIC23.87■■□□□ 1.41
PCDH17O14917 HDGF-201ENST00000357325 2380 ntAPPRIS P1 TSL 1 (best) BASIC23.87■■□□□ 1.41
PCDH17O14917 INPP4A-203ENST00000409463 1565 ntTSL 1 (best) BASIC23.86■■□□□ 1.41
PCDH17O14917 AL121749.1-202ENST00000609313 2153 ntBASIC23.86■■□□□ 1.41
PCDH17O14917 ARHGEF7-206ENST00000375741 5525 ntTSL 1 (best) BASIC23.86■■□□□ 1.41
PCDH17O14917 RPS2-210ENST00000530225 765 ntTSL 2 BASIC23.86■■□□□ 1.41
PCDH17O14917 C16orf74-204ENST00000602719 1002 ntAPPRIS ALT2 TSL 3 BASIC23.86■■□□□ 1.41
PCDH17O14917 SLC16A3-214ENST00000582743 2002 ntAPPRIS P1 TSL 1 (best) BASIC23.86■■□□□ 1.41
PCDH17O14917 TMEM55B-201ENST00000250489 1961 ntAPPRIS P3 TSL 1 (best) BASIC23.85■■□□□ 1.41
PCDH17O14917 FLJ37453-201ENST00000317122 2473 ntTSL 2 BASIC23.85■■□□□ 1.41
PCDH17O14917 SRP68-213ENST00000629930 165 ntTSL 5 BASIC23.85■■□□□ 1.41
PCDH17O14917 VEGFC-202ENST00000618562 2064 ntAPPRIS P1 TSL 1 (best) BASIC23.85■■□□□ 1.41
PCDH17O14917 ZNF276-202ENST00000443381 2267 ntAPPRIS P1 TSL 1 (best) BASIC23.85■■□□□ 1.41
PCDH17O14917 ANKS1B-203ENST00000341752 2115 ntTSL 2 BASIC23.84■■□□□ 1.41
PCDH17O14917 BAX-202ENST00000345358 793 ntAPPRIS P1 TSL 1 (best) BASIC23.84■■□□□ 1.41
PCDH17O14917 IGFBPL1-201ENST00000377694 1093 ntAPPRIS P1 TSL 2 BASIC23.84■■□□□ 1.41
PCDH17O14917 FAM168B-201ENST00000389915 944 ntAPPRIS P1 TSL 3 BASIC23.84■■□□□ 1.41
PCDH17O14917 CIC-201ENST00000160740 6111 ntAPPRIS ALT1 TSL 5 BASIC23.84■■□□□ 1.41
PCDH17O14917 TNIP2-201ENST00000315423 1974 ntAPPRIS P3 TSL 1 (best) BASIC23.83■■□□□ 1.41
PCDH17O14917 ROM1-201ENST00000278833 1878 ntAPPRIS P2 TSL 1 (best) BASIC23.83■■□□□ 1.41
PCDH17O14917 GNAS-211ENST00000371095 1931 ntAPPRIS ALT1 TSL 1 (best) BASIC23.83■■□□□ 1.41
PCDH17O14917 EIF5A-208ENST00000573542 1089 ntAPPRIS P1 TSL 2 BASIC23.83■■□□□ 1.41
PCDH17O14917 AC148477.6-201ENST00000623746 465 ntBASIC23.83■■□□□ 1.41
PCDH17O14917 SLC16A8-201ENST00000320521 1878 ntAPPRIS P1 TSL 1 (best) BASIC23.83■■□□□ 1.4
PCDH17O14917 HOMER3-202ENST00000392351 1557 ntAPPRIS P3 TSL 1 (best) BASIC23.82■■□□□ 1.4
PCDH17O14917 GNAS-207ENST00000354359 1975 ntTSL 1 (best) BASIC23.82■■□□□ 1.4
PCDH17O14917 GNAS-210ENST00000371085 1972 ntTSL 1 (best) BASIC23.82■■□□□ 1.4
PCDH17O14917 PIGX-201ENST00000296333 953 ntAPPRIS ALT2 TSL 2 BASIC23.82■■□□□ 1.4
PCDH17O14917 ABHD17AP3-201ENST00000503096 1137 ntBASIC23.82■■□□□ 1.4
PCDH17O14917 RPS20-211ENST00000524349 752 ntTSL 1 (best) BASIC23.82■■□□□ 1.4
PCDH17O14917 BRD4-212ENST00000630599 726 ntTSL 2 BASIC23.82■■□□□ 1.4
PCDH17O14917 SNTB1-202ENST00000517992 2273 ntAPPRIS P1 TSL 1 (best) BASIC23.81■■□□□ 1.4
PCDH17O14917 OVOL2-201ENST00000278780 1555 ntAPPRIS P1 TSL 1 (best) BASIC23.81■■□□□ 1.4
PCDH17O14917 TAZ-201ENST00000369776 1596 ntTSL 1 (best) BASIC23.81■■□□□ 1.4
PCDH17O14917 BCL7B-202ENST00000411832 1458 ntTSL 2 BASIC23.81■■□□□ 1.4
PCDH17O14917 THRA-204ENST00000546243 1909 ntAPPRIS P1 TSL 2 BASIC23.8■■□□□ 1.4
PCDH17O14917 RPUSD1-208ENST00000567114 1835 ntTSL 2 BASIC23.8■■□□□ 1.4
PCDH17O14917 MRPL51-201ENST00000229238 1234 ntAPPRIS P1 TSL 1 (best) BASIC23.8■■□□□ 1.4
PCDH17O14917 MBD2-201ENST00000256429 5188 ntAPPRIS P1 TSL 1 (best) BASIC23.8■■□□□ 1.4
PCDH17O14917 IHH-201ENST00000295731 2023 ntAPPRIS P1 TSL 1 (best) BASIC23.8■■□□□ 1.4
PCDH17O14917 LAGE3-201ENST00000357360 949 ntAPPRIS P1 TSL 1 (best) BASIC23.8■■□□□ 1.4
PCDH17O14917 PEA15-201ENST00000360472 2471 ntAPPRIS P1 TSL 1 (best) BASIC23.8■■□□□ 1.4
PCDH17O14917 TMEM187-201ENST00000369982 1880 ntAPPRIS P1 TSL 1 (best) BASIC23.8■■□□□ 1.4
PCDH17O14917 TPT1-202ENST00000379055 948 ntTSL 2 BASIC23.8■■□□□ 1.4
PCDH17O14917 PPP1CC-208ENST00000551676 1581 ntTSL 2 BASIC23.8■■□□□ 1.4
PCDH17O14917 UBALD1-203ENST00000587649 707 ntTSL 3 BASIC23.8■■□□□ 1.4
PCDH17O14917 F8A3-201ENST00000622749 1759 ntAPPRIS P1 BASIC23.8■■□□□ 1.4
PCDH17O14917 CDH23-208ENST00000461841 2000 ntTSL 5 BASIC23.79■■□□□ 1.4
PCDH17O14917 CAPNS1-204ENST00000587718 1558 ntAPPRIS ALT2 TSL 1 (best) BASIC23.79■■□□□ 1.4
PCDH17O14917 RHEB-201ENST00000262187 2075 ntAPPRIS P1 TSL 1 (best) BASIC23.79■■□□□ 1.4
PCDH17O14917 PEX7-203ENST00000541292 945 ntTSL 5 BASIC23.79■■□□□ 1.4
PCDH17O14917 TMEM55B-202ENST00000398020 1696 ntAPPRIS ALT1 TSL 1 (best) BASIC23.79■■□□□ 1.4
PCDH17O14917 KCNJ4-201ENST00000303592 2065 ntAPPRIS P1 TSL 1 (best) BASIC23.79■■□□□ 1.4
PCDH17O14917 AHSA2-201ENST00000357022 2437 ntTSL 1 (best) BASIC23.78■■□□□ 1.4
PCDH17O14917 CHST11-203ENST00000547956 936 ntTSL 2 BASIC23.78■■□□□ 1.4
PCDH17O14917 MRAP2-201ENST00000257776 2153 ntAPPRIS P1 TSL 1 (best) BASIC23.78■■□□□ 1.4
PCDH17O14917 DCDC2C-201ENST00000399143 1476 ntAPPRIS P1 TSL 5 BASIC23.77■■□□□ 1.4
PCDH17O14917 U2AF1-203ENST00000398137 1019 ntTSL 1 (best) BASIC23.77■■□□□ 1.4
PCDH17O14917 RBPMS-209ENST00000520161 842 ntTSL 2 BASIC23.77■■□□□ 1.4
PCDH17O14917 COPZ2-210ENST00000621465 895 ntAPPRIS P1 TSL 1 (best) BASIC23.77■■□□□ 1.4
PCDH17O14917 U2AF1L5-212ENST00000639996 1019 ntTSL 1 (best) BASIC23.77■■□□□ 1.4
PCDH17O14917 ARHGEF7-205ENST00000375739 5375 ntTSL 1 (best) BASIC23.76■■□□□ 1.39
PCDH17O14917 TMEM150A-202ENST00000334462 1518 ntAPPRIS P1 TSL 1 (best) BASIC23.76■■□□□ 1.39
PCDH17O14917 NAPA-201ENST00000263354 1839 ntAPPRIS P1 TSL 1 (best) BASIC23.76■■□□□ 1.39
PCDH17O14917 ZNF768-201ENST00000380412 2315 ntAPPRIS P2 TSL 1 (best) BASIC23.75■■□□□ 1.39
PCDH17O14917 HOMER2-202ENST00000450735 1950 ntAPPRIS ALT2 TSL 1 (best) BASIC23.75■■□□□ 1.39
PCDH17O14917 LSM7-201ENST00000252622 529 ntAPPRIS P1 TSL 1 (best) BASIC23.75■■□□□ 1.39
PCDH17O14917 PPP4R4-202ENST00000328839 876 ntTSL 1 (best) BASIC23.75■■□□□ 1.39
PCDH17O14917 BOK-AS1-201ENST00000434306 643 ntTSL 1 (best) BASIC23.75■■□□□ 1.39
PCDH17O14917 EVC-203ENST00000509451 1960 ntTSL 1 (best) BASIC23.74■■□□□ 1.39
PCDH17O14917 BCAP31-201ENST00000345046 1589 ntAPPRIS P1 TSL 1 (best) BASIC23.74■■□□□ 1.39
PCDH17O14917 RAB40C-204ENST00000538492 2569 ntAPPRIS P1 TSL 2 BASIC23.74■■□□□ 1.39
PCDH17O14917 RRNAD1-201ENST00000368216 2254 ntAPPRIS P3 TSL 1 (best) BASIC23.74■■□□□ 1.39
Retrieved 100 of 98,524 protein–RNA pairs in 13.4 ms