Protein–RNA interactions for Protein: A6NFC5

TMEM235, Transmembrane protein 235, humanhuman

Predictions only

Length 223 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM235A6NFC5 PPP1R14C-201ENST00000361131 2152 ntAPPRIS P1 TSL 1 (best) BASIC21.38■■□□□ 1.01
TMEM235A6NFC5 HSD11B1L-202ENST00000339423 1660 ntAPPRIS P3 TSL 1 (best) BASIC21.37■■□□□ 1.01
TMEM235A6NFC5 LFNG-203ENST00000359574 1377 ntAPPRIS ALT1 TSL 1 (best) BASIC21.37■■□□□ 1.01
TMEM235A6NFC5 RASL10A-202ENST00000401450 1720 ntTSL 2 BASIC21.37■■□□□ 1.01
TMEM235A6NFC5 AC018358.1-201ENST00000631079 1402 ntBASIC21.37■■□□□ 1.01
TMEM235A6NFC5 FANCE-201ENST00000229769 2554 ntAPPRIS P1 TSL 1 (best) BASIC21.37■■□□□ 1.01
TMEM235A6NFC5 AC009690.3-201ENST00000569547 1902 ntAPPRIS P1 TSL 2 BASIC21.35■■□□□ 1.01
TMEM235A6NFC5 ALG2-203ENST00000476832 1880 ntAPPRIS P1 TSL 1 (best) BASIC21.35■■□□□ 1.01
TMEM235A6NFC5 FBXL8-206ENST00000519917 1460 ntAPPRIS P1 TSL 5 BASIC21.35■■□□□ 1.01
TMEM235A6NFC5 FAM120AOS-202ENST00000423591 1800 ntAPPRIS ALT2 TSL 1 (best) BASIC21.35■■□□□ 1.01
TMEM235A6NFC5 AP000547.3-202ENST00000592107 1019 ntTSL 1 (best) BASIC21.35■■□□□ 1.01
TMEM235A6NFC5 KLC1-203ENST00000347839 2271 ntTSL 5 BASIC21.35■■□□□ 1.01
TMEM235A6NFC5 C14orf80-202ENST00000334656 1358 ntAPPRIS ALT2 TSL 2 BASIC21.35■■□□□ 1.01
TMEM235A6NFC5 AC145676.1-201ENST00000514988 2004 ntBASIC21.34■■□□□ 1.01
TMEM235A6NFC5 DNAH9-209ENST00000579828 1986 ntTSL 2 BASIC21.34■■□□□ 1.01
TMEM235A6NFC5 MEST-211ENST00000437945 1455 ntTSL 5 BASIC21.34■■□□□ 1.01
TMEM235A6NFC5 FGF3-201ENST00000334134 892 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
TMEM235A6NFC5 AC020928.2-201ENST00000588717 2197 ntBASIC21.33■■□□□ 1.01
TMEM235A6NFC5 CAPN10-208ENST00000404753 2570 ntAPPRIS ALT2 TSL 5 BASIC21.33■■□□□ 1.01
TMEM235A6NFC5 C8orf58-206ENST00000614574 1955 ntAPPRIS ALT2 TSL 5 BASIC21.33■■□□□ 1.01
TMEM235A6NFC5 HNRNPL-201ENST00000221419 2471 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1
TMEM235A6NFC5 HIST2H3C-201ENST00000369158 1656 ntAPPRIS P1 BASIC21.32■■□□□ 1
TMEM235A6NFC5 HIST2H3A-201ENST00000403683 1656 ntAPPRIS P1 BASIC21.32■■□□□ 1
TMEM235A6NFC5 SNX15-202ENST00000377244 1939 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
TMEM235A6NFC5 HOXB3-211ENST00000490677 1109 ntTSL 1 (best) BASIC21.32■■□□□ 1
TMEM235A6NFC5 CAHM-201ENST00000604200 896 ntBASIC21.32■■□□□ 1
TMEM235A6NFC5 NPAS3-203ENST00000357798 2763 ntAPPRIS ALT2 TSL 1 (best) BASIC21.32■■□□□ 1
TMEM235A6NFC5 PKM-204ENST00000449901 2526 ntTSL 2 BASIC21.31■■□□□ 1
TMEM235A6NFC5 ANKS3-203ENST00000450067 2272 ntTSL 5 BASIC21.31■■□□□ 1
TMEM235A6NFC5 PPM1B-202ENST00000345249 1713 ntTSL 1 (best) BASIC21.31■■□□□ 1
TMEM235A6NFC5 BTBD6-204ENST00000463376 2195 ntAPPRIS ALT2 TSL 2 BASIC21.31■■□□□ 1
TMEM235A6NFC5 SNX5-201ENST00000377759 2270 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
TMEM235A6NFC5 PICALM-224ENST00000630913 2261 ntTSL 5 BASIC21.31■■□□□ 1
TMEM235A6NFC5 DUSP15-202ENST00000339738 1454 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
TMEM235A6NFC5 ANKRD53-203ENST00000441349 1797 ntTSL 5 BASIC21.31■■□□□ 1
TMEM235A6NFC5 GDF1-201ENST00000247005 2517 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
TMEM235A6NFC5 CERS1-204ENST00000623882 2517 ntTSL 1 (best) BASIC21.3■■□□□ 1
TMEM235A6NFC5 TIGD3-201ENST00000309880 2012 ntAPPRIS P1 TSL 2 BASIC21.3■■□□□ 1
TMEM235A6NFC5 AC006486.1-201ENST00000594664 634 ntAPPRIS P1 TSL 3 BASIC21.3■■□□□ 1
TMEM235A6NFC5 VEGFA-231ENST00000640499 1188 ntAPPRIS P3 TSL 1 (best) BASIC21.3■■□□□ 1
TMEM235A6NFC5 DLX2-202ENST00000466293 1852 ntTSL 2 BASIC21.3■■□□□ 1
TMEM235A6NFC5 CNNM2-201ENST00000369875 2059 ntTSL 1 (best) BASIC21.3■■□□□ 1
TMEM235A6NFC5 BIN1-210ENST00000393041 2272 ntTSL 1 (best) BASIC21.3■■□□□ 1
TMEM235A6NFC5 NKX2-1-204ENST00000522719 1417 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
TMEM235A6NFC5 LMTK3-201ENST00000270238 4972 ntAPPRIS P2 TSL 1 (best) BASIC21.29■■□□□ 1
TMEM235A6NFC5 SYT12-205ENST00000527043 1661 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
TMEM235A6NFC5 PPP1R26-201ENST00000356818 4932 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
TMEM235A6NFC5 SP5-201ENST00000375281 2033 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
TMEM235A6NFC5 C16orf59-202ENST00000483320 1709 ntAPPRIS ALT2 TSL 2 BASIC21.29■■□□□ 1
TMEM235A6NFC5 CDC16-211ENST00000628084 2058 ntTSL 5 BASIC21.28■■□□□ 1
TMEM235A6NFC5 KLC2-205ENST00000394078 1557 ntTSL 5 BASIC21.28■■□□□ 1
TMEM235A6NFC5 LANCL3-203ENST00000614025 1469 ntTSL 2 BASIC21.28■■□□□ 1
TMEM235A6NFC5 LYPLA1-215ENST00000618914 2482 ntTSL 5 BASIC21.28■■□□□ 1
TMEM235A6NFC5 GCLC-209ENST00000514004 2356 ntTSL 1 (best) BASIC21.28■■□□□ 1
TMEM235A6NFC5 NRBF2-202ENST00000435510 1816 ntTSL 2 BASIC21.28■■□□□ 1
TMEM235A6NFC5 TSKU-201ENST00000333090 2712 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
TMEM235A6NFC5 IFFO2-203ENST00000455833 6188 ntAPPRIS P1 TSL 5 BASIC21.28■■□□□ 1
TMEM235A6NFC5 MAP3K3-210ENST00000584573 2480 ntTSL 1 (best) BASIC21.28■■□□□ 1
TMEM235A6NFC5 TMEM64-201ENST00000418210 4663 ntTSL 2 BASIC21.27■■□□□ 1
TMEM235A6NFC5 AC135983.2-203ENST00000454486 1613 ntBASIC21.27■■□□□ 1
TMEM235A6NFC5 LINC00588-201ENST00000521663 1875 ntTSL 2 BASIC21.27■■□□□ 1
TMEM235A6NFC5 BAMBI-201ENST00000375533 1877 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
TMEM235A6NFC5 ZSWIM6-201ENST00000252744 5501 ntAPPRIS P1 TSL 5 BASIC21.26■□□□□ 0.99
TMEM235A6NFC5 LRRC75B-201ENST00000318753 1238 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
TMEM235A6NFC5 VSIG8-201ENST00000368100 1818 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
TMEM235A6NFC5 C19orf47-202ENST00000392035 2126 ntAPPRIS ALT2 TSL 1 (best) BASIC21.26■□□□□ 0.99
TMEM235A6NFC5 FEZ2-204ENST00000405912 1931 ntTSL 1 (best) BASIC21.25■□□□□ 0.99
TMEM235A6NFC5 AMIGO1-201ENST00000369862 2229 ntAPPRIS P1 TSL 5 BASIC21.25■□□□□ 0.99
TMEM235A6NFC5 NADK2-210ENST00000514504 1233 ntTSL 5 BASIC21.25■□□□□ 0.99
TMEM235A6NFC5 F8A1-201ENST00000610495 1713 ntAPPRIS P1 BASIC21.25■□□□□ 0.99
TMEM235A6NFC5 OTUD5-203ENST00000396743 2682 ntAPPRIS ALT1 TSL 1 (best) BASIC21.25■□□□□ 0.99
TMEM235A6NFC5 PLEKHA8-201ENST00000258679 2293 ntTSL 1 (best) BASIC21.25■□□□□ 0.99
TMEM235A6NFC5 DDAH2-212ENST00000375789 1688 ntAPPRIS P1 TSL 2 BASIC21.24■□□□□ 0.99
TMEM235A6NFC5 DDAH2-213ENST00000375792 1688 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
TMEM235A6NFC5 UBE2J2-202ENST00000349431 1733 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
TMEM235A6NFC5 MISP3-201ENST00000269720 1424 ntAPPRIS ALT2 TSL 5 BASIC21.24■□□□□ 0.99
TMEM235A6NFC5 CEBPB-201ENST00000303004 1956 ntAPPRIS P1 BASIC21.24■□□□□ 0.99
TMEM235A6NFC5 QKI-207ENST00000453779 5685 ntTSL 1 (best) BASIC21.24■□□□□ 0.99
TMEM235A6NFC5 WHAMMP2-203ENST00000563942 1603 ntBASIC21.23■□□□□ 0.99
TMEM235A6NFC5 AC012629.2-201ENST00000606513 377 ntTSL 5 BASIC21.23■□□□□ 0.99
TMEM235A6NFC5 MAD2L2-201ENST00000235310 1860 ntAPPRIS P1 TSL 2 BASIC21.22■□□□□ 0.99
TMEM235A6NFC5 RHBDD2-202ENST00000318622 1878 ntTSL 2 BASIC21.22■□□□□ 0.99
TMEM235A6NFC5 MYPOP-201ENST00000322217 1890 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
TMEM235A6NFC5 DVL1-201ENST00000378888 3239 ntAPPRIS ALT1 TSL 5 BASIC21.22■□□□□ 0.99
TMEM235A6NFC5 ETS1-201ENST00000319397 2231 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
TMEM235A6NFC5 LYPD6B-203ENST00000409642 1577 ntAPPRIS P3 TSL 1 (best) BASIC21.22■□□□□ 0.99
TMEM235A6NFC5 HABP4-202ENST00000375251 2304 ntTSL 1 (best) BASIC21.22■□□□□ 0.99
TMEM235A6NFC5 MEN1-204ENST00000377313 1871 ntAPPRIS P3 TSL 2 BASIC21.22■□□□□ 0.99
TMEM235A6NFC5 RCC1L-205ENST00000618035 1409 ntTSL 1 (best) BASIC21.21■□□□□ 0.99
TMEM235A6NFC5 AC136428.2-201ENST00000563187 214 ntBASIC21.21■□□□□ 0.99
TMEM235A6NFC5 PINK1-201ENST00000321556 2660 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
TMEM235A6NFC5 CDK9-201ENST00000373264 2463 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
TMEM235A6NFC5 MARCKSL1-201ENST00000329421 1699 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
TMEM235A6NFC5 DACT1-206ENST00000556859 2239 ntAPPRIS ALT2 TSL 2 BASIC21.19■□□□□ 0.98
TMEM235A6NFC5 SETBP1-202ENST00000426838 1785 ntAPPRIS ALT2 TSL 1 (best) BASIC21.19■□□□□ 0.98
TMEM235A6NFC5 MAPK8IP1P1-201ENST00000574657 1439 ntBASIC21.19■□□□□ 0.98
TMEM235A6NFC5 CTBP2-211ENST00000494626 2014 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
TMEM235A6NFC5 PCYT2-202ENST00000538721 1765 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
TMEM235A6NFC5 AC092803.2-201ENST00000564287 1899 ntBASIC21.18■□□□□ 0.98
TMEM235A6NFC5 NELFB-202ENST00000634710 1887 ntAPPRIS P2 TSL 1 (best) BASIC21.18■□□□□ 0.98
Retrieved 100 of 98,524 protein–RNA pairs in 36.1 ms