Protein–RNA interactions for Protein: A4FU49

SH3D21, SH3 domain-containing protein 21, humanhuman

Predictions only

Length 640 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SH3D21A4FU49 RPS2-202ENST00000526522 924 ntTSL 2 BASIC23.19■■□□□ 1.3
SH3D21A4FU49 PTPA-202ENST00000347048 1989 ntTSL 1 (best) BASIC23.19■■□□□ 1.3
SH3D21A4FU49 AKAP8L-208ENST00000595465 1933 ntTSL 2 BASIC23.19■■□□□ 1.3
SH3D21A4FU49 AKAP17A-202ENST00000381261 2187 ntAPPRIS ALT2 TSL 1 (best) BASIC23.18■■□□□ 1.3
SH3D21A4FU49 POLR1D-201ENST00000302979 1166 ntAPPRIS P2 TSL 1 (best) BASIC23.18■■□□□ 1.3
SH3D21A4FU49 MRPL9-201ENST00000368829 882 ntAPPRIS ALT2 TSL 2 BASIC23.18■■□□□ 1.3
SH3D21A4FU49 AL589765.4-201ENST00000512280 382 ntTSL 3 BASIC23.18■■□□□ 1.3
SH3D21A4FU49 MYCL-202ENST00000372816 1688 ntAPPRIS P3 TSL 2 BASIC23.18■■□□□ 1.3
SH3D21A4FU49 TANGO2-214ENST00000447208 2086 ntTSL 3 BASIC23.18■■□□□ 1.3
SH3D21A4FU49 CTSA-203ENST00000372459 1972 ntTSL 1 (best) BASIC23.18■■□□□ 1.3
SH3D21A4FU49 RFLNA-205ENST00000546355 2354 ntAPPRIS ALT1 TSL 1 (best) BASIC23.18■■□□□ 1.3
SH3D21A4FU49 PRELID2-207ENST00000511435 1894 ntAPPRIS ALT1 TSL 2 BASIC23.17■■□□□ 1.3
SH3D21A4FU49 HMCES-202ENST00000389735 1763 ntAPPRIS P1 TSL 1 (best) BASIC23.17■■□□□ 1.3
SH3D21A4FU49 PRSS41-201ENST00000399677 1127 ntAPPRIS P1 TSL 5 BASIC23.17■■□□□ 1.3
SH3D21A4FU49 RNF166-209ENST00000567844 633 ntTSL 5 BASIC23.17■■□□□ 1.3
SH3D21A4FU49 NREP-202ENST00000379671 2581 ntAPPRIS P1 TSL 1 (best) BASIC23.17■■□□□ 1.3
SH3D21A4FU49 DEAF1-201ENST00000382409 2500 ntAPPRIS P1 TSL 1 (best) BASIC23.17■■□□□ 1.3
SH3D21A4FU49 RALY-201ENST00000246194 1789 ntAPPRIS P4 TSL 1 (best) BASIC23.17■■□□□ 1.3
SH3D21A4FU49 CFAP99-207ENST00000635017 2298 ntTSL 5 BASIC23.16■■□□□ 1.3
SH3D21A4FU49 FGF19-201ENST00000294312 2447 ntAPPRIS P1 TSL 1 (best) BASIC23.16■■□□□ 1.3
SH3D21A4FU49 KLC1-225ENST00000557575 2188 ntTSL 5 BASIC23.16■■□□□ 1.3
SH3D21A4FU49 GPS1-204ENST00000392358 2276 ntTSL 1 (best) BASIC23.15■■□□□ 1.3
SH3D21A4FU49 MTMR1-202ENST00000370390 2755 ntAPPRIS P1 TSL 1 (best) BASIC23.14■■□□□ 1.3
SH3D21A4FU49 U2AF1L5-201ENST00000610664 897 ntAPPRIS P5 TSL 1 (best) BASIC23.14■■□□□ 1.29
SH3D21A4FU49 VEGFA-226ENST00000611736 1239 ntTSL 1 (best) BASIC23.14■■□□□ 1.29
SH3D21A4FU49 UCK1-204ENST00000372215 2167 ntAPPRIS P1 TSL 1 (best) BASIC23.14■■□□□ 1.29
SH3D21A4FU49 ENKD1-201ENST00000243878 1579 ntAPPRIS P1 TSL 1 (best) BASIC23.14■■□□□ 1.29
SH3D21A4FU49 MYLIP-202ENST00000356840 1666 ntAPPRIS P1 TSL 1 (best) BASIC23.13■■□□□ 1.29
SH3D21A4FU49 SPIRE1-203ENST00000410092 5533 ntAPPRIS P3 TSL 1 (best) BASIC23.13■■□□□ 1.29
SH3D21A4FU49 MIR639-201ENST00000384974 98 ntBASIC23.13■■□□□ 1.29
SH3D21A4FU49 LINC01971-201ENST00000617888 1048 ntBASIC23.13■■□□□ 1.29
SH3D21A4FU49 DTNBP1-202ENST00000344537 1403 ntAPPRIS P1 TSL 1 (best) BASIC23.13■■□□□ 1.29
SH3D21A4FU49 KLC2-205ENST00000394078 1557 ntTSL 5 BASIC23.13■■□□□ 1.29
SH3D21A4FU49 MSANTD2-201ENST00000239614 2495 ntTSL 2 BASIC23.13■■□□□ 1.29
SH3D21A4FU49 CCDC61-204ENST00000595358 1817 ntAPPRIS P2 TSL 5 BASIC23.12■■□□□ 1.29
SH3D21A4FU49 SPTSSA-201ENST00000298130 2777 ntAPPRIS P1 TSL 1 (best) BASIC23.12■■□□□ 1.29
SH3D21A4FU49 AL449106.1-201ENST00000608517 1980 ntBASIC23.12■■□□□ 1.29
SH3D21A4FU49 GPR150-201ENST00000380007 2065 ntAPPRIS P1 BASIC23.12■■□□□ 1.29
SH3D21A4FU49 PLEKHJ1-201ENST00000326631 1206 ntAPPRIS P1 TSL 1 (best) BASIC23.12■■□□□ 1.29
SH3D21A4FU49 RPS2-201ENST00000343262 985 ntAPPRIS P1 TSL 1 (best) BASIC23.12■■□□□ 1.29
SH3D21A4FU49 NREP-216ENST00000508870 540 ntAPPRIS P1 TSL 4 BASIC23.12■■□□□ 1.29
SH3D21A4FU49 ANKRD53-201ENST00000272421 2185 ntAPPRIS P3 TSL 1 (best) BASIC23.11■■□□□ 1.29
SH3D21A4FU49 MORF4L1-203ENST00000426013 1880 ntAPPRIS P1 TSL 1 (best) BASIC23.11■■□□□ 1.29
SH3D21A4FU49 DNPEP-201ENST00000273075 2425 ntAPPRIS P3 TSL 1 (best) BASIC23.11■■□□□ 1.29
SH3D21A4FU49 BCL7C-202ENST00000380317 2409 ntTSL 1 (best) BASIC23.11■■□□□ 1.29
SH3D21A4FU49 FBXO45-201ENST00000311630 5899 ntAPPRIS P1 TSL 1 (best) BASIC23.11■■□□□ 1.29
SH3D21A4FU49 MIR4449-201ENST00000578365 66 ntBASIC23.11■■□□□ 1.29
SH3D21A4FU49 MIR3648-2-201ENST00000581792 180 ntBASIC23.11■■□□□ 1.29
SH3D21A4FU49 MIR3648-1-201ENST00000615959 180 ntBASIC23.11■■□□□ 1.29
SH3D21A4FU49 FSD1-201ENST00000221856 1831 ntAPPRIS P1 TSL 1 (best) BASIC23.1■■□□□ 1.29
SH3D21A4FU49 CLEC3B-202ENST00000428034 752 ntTSL 2 BASIC23.1■■□□□ 1.29
SH3D21A4FU49 TRIM52-AS1-203ENST00000509252 529 ntTSL 3 BASIC23.1■■□□□ 1.29
SH3D21A4FU49 AL118558.1-203ENST00000553701 447 ntTSL 3 BASIC23.1■■□□□ 1.29
SH3D21A4FU49 AC016575.1-201ENST00000607026 382 ntBASIC23.1■■□□□ 1.29
SH3D21A4FU49 DUX4L11-201ENST00000611504 1267 ntBASIC23.1■■□□□ 1.29
SH3D21A4FU49 DUX4L12-201ENST00000614593 1267 ntBASIC23.1■■□□□ 1.29
SH3D21A4FU49 DUX4L14-201ENST00000621227 1267 ntBASIC23.1■■□□□ 1.29
SH3D21A4FU49 GDI1-215ENST00000630693 786 ntTSL 4 BASIC23.1■■□□□ 1.29
SH3D21A4FU49 PKM-203ENST00000389093 2279 ntTSL 5 BASIC23.1■■□□□ 1.29
SH3D21A4FU49 ESRRA-203ENST00000406310 2218 ntAPPRIS ALT1 TSL 1 (best) BASIC23.09■■□□□ 1.29
SH3D21A4FU49 CAPN10-204ENST00000354082 1999 ntTSL 1 (best) BASIC23.09■■□□□ 1.29
SH3D21A4FU49 SPG21-201ENST00000204566 1822 ntAPPRIS P1 TSL 1 (best) BASIC23.09■■□□□ 1.29
SH3D21A4FU49 ATP6V1E2-204ENST00000522587 1559 ntAPPRIS P1 TSL 3 BASIC23.09■■□□□ 1.29
SH3D21A4FU49 AGPS-202ENST00000409888 815 ntTSL 4 BASIC23.08■■□□□ 1.29
SH3D21A4FU49 KRT18-201ENST00000388835 1562 ntAPPRIS P1 TSL 1 (best) BASIC23.08■■□□□ 1.29
SH3D21A4FU49 NOXA1-201ENST00000341349 1678 ntAPPRIS P1 TSL 1 (best) BASIC23.08■■□□□ 1.29
SH3D21A4FU49 KIAA2013-201ENST00000376572 2815 ntAPPRIS P1 TSL 1 (best) BASIC23.08■■□□□ 1.28
SH3D21A4FU49 ZNF692-201ENST00000306601 1931 ntAPPRIS P3 TSL 1 (best) BASIC23.07■■□□□ 1.28
SH3D21A4FU49 SLC16A11-201ENST00000308009 1803 ntAPPRIS P2 TSL 1 (best) BASIC23.07■■□□□ 1.28
SH3D21A4FU49 ZNF639-209ENST00000496856 2033 ntAPPRIS P1 TSL 1 (best) BASIC23.06■■□□□ 1.28
SH3D21A4FU49 PCSK6-216ENST00000615296 2921 ntTSL 5 BASIC23.06■■□□□ 1.28
SH3D21A4FU49 GTF2IP1-204ENST00000616377 2632 ntTSL 2 BASIC23.06■■□□□ 1.28
SH3D21A4FU49 POU2F2-208ENST00000529952 1716 ntAPPRIS ALT2 TSL 1 (best) BASIC23.05■■□□□ 1.28
SH3D21A4FU49 HSD17B1-201ENST00000225929 1265 ntAPPRIS ALT2 TSL 2 BASIC23.05■■□□□ 1.28
SH3D21A4FU49 TCAM1P-201ENST00000463377 452 ntTSL 3 BASIC23.05■■□□□ 1.28
SH3D21A4FU49 C5orf66-AS1-201ENST00000507035 843 ntTSL 2 BASIC23.05■■□□□ 1.28
SH3D21A4FU49 PRKAR1B-203ENST00000403562 1917 ntAPPRIS P1 TSL 1 (best) BASIC23.05■■□□□ 1.28
SH3D21A4FU49 GSX1-201ENST00000302945 1663 ntAPPRIS P1 TSL 1 (best) BASIC23.05■■□□□ 1.28
SH3D21A4FU49 RUNX2-203ENST00000371436 1588 ntAPPRIS ALT2 TSL 5 BASIC23.05■■□□□ 1.28
SH3D21A4FU49 MXRA7-202ENST00000375036 1950 ntAPPRIS ALT2 TSL 2 BASIC23.05■■□□□ 1.28
SH3D21A4FU49 TOMM40-201ENST00000252487 1707 ntAPPRIS P2 TSL 1 (best) BASIC23.05■■□□□ 1.28
SH3D21A4FU49 TOMM40-202ENST00000405636 1709 ntAPPRIS P2 TSL 1 (best) BASIC23.05■■□□□ 1.28
SH3D21A4FU49 QDPR-201ENST00000281243 1648 ntAPPRIS P1 TSL 1 (best) BASIC23.04■■□□□ 1.28
SH3D21A4FU49 SNTA1-201ENST00000217381 2342 ntAPPRIS P1 TSL 1 (best) BASIC23.04■■□□□ 1.28
SH3D21A4FU49 CHPT1-201ENST00000229266 1585 ntAPPRIS P2 TSL 1 (best) BASIC23.04■■□□□ 1.28
SH3D21A4FU49 FKBP1A-205ENST00000439640 1583 ntTSL 3 BASIC23.04■■□□□ 1.28
SH3D21A4FU49 P2RX2-203ENST00000350048 1344 ntTSL 1 (best) BASIC23.04■■□□□ 1.28
SH3D21A4FU49 TBCC-201ENST00000372876 1616 ntAPPRIS P1 BASIC23.04■■□□□ 1.28
SH3D21A4FU49 CCDC160-202ENST00000517294 1790 ntAPPRIS P1 TSL 5 BASIC23.04■■□□□ 1.28
SH3D21A4FU49 PLPPR3-201ENST00000359894 2387 ntAPPRIS P3 TSL 1 (best) BASIC23.04■■□□□ 1.28
SH3D21A4FU49 MORF4L1-202ENST00000379535 2274 ntTSL 2 BASIC23.03■■□□□ 1.28
SH3D21A4FU49 CR559946.2-201ENST00000623684 991 ntBASIC23.03■■□□□ 1.28
SH3D21A4FU49 FAM66E-202ENST00000533615 2087 ntTSL 2 BASIC23.03■■□□□ 1.28
SH3D21A4FU49 FOXA3-201ENST00000302177 1989 ntAPPRIS P1 TSL 1 (best) BASIC23.03■■□□□ 1.28
SH3D21A4FU49 MAD2L2-207ENST00000376692 1118 ntAPPRIS P1 TSL 1 (best) BASIC23.02■■□□□ 1.28
SH3D21A4FU49 AC004837.3-201ENST00000420748 565 ntTSL 4 BASIC23.02■■□□□ 1.28
SH3D21A4FU49 TOP1MT-208ENST00000519148 1868 ntTSL 2 BASIC23.02■■□□□ 1.28
SH3D21A4FU49 SV2B-203ENST00000545111 2099 ntTSL 2 BASIC23.02■■□□□ 1.28
SH3D21A4FU49 MFSD12-202ENST00000389395 2039 ntAPPRIS ALT2 TSL 1 (best) BASIC23.01■■□□□ 1.27
SH3D21A4FU49 BATF3-201ENST00000243440 980 ntAPPRIS P1 TSL 1 (best) BASIC23.01■■□□□ 1.27
Retrieved 100 of 98,524 protein–RNA pairs in 16 ms