Protein–RNA interactions for Protein: A0A5B7

TCRBV4S1A1T, T-cell receptor beta variable 29-1 (Fragment), humanhuman

Predictions only

Length 111 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TCRBV4S1A1TA0A5B7 PROC-203ENST00000409048 1586 ntTSL 5 BASIC20.14■□□□□ 0.81
TCRBV4S1A1TA0A5B7 AC231981.1-201ENST00000450917 974 ntTSL 3 BASIC20.14■□□□□ 0.81
TCRBV4S1A1TA0A5B7 GRPEL2-204ENST00000513661 546 ntTSL 2 BASIC20.14■□□□□ 0.81
TCRBV4S1A1TA0A5B7 DERA-201ENST00000428559 1705 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
TCRBV4S1A1TA0A5B7 CARM1-202ENST00000344150 2722 ntAPPRIS ALT2 TSL 5 BASIC20.13■□□□□ 0.81
TCRBV4S1A1TA0A5B7 AC127502.1-201ENST00000399971 1502 ntBASIC20.13■□□□□ 0.81
TCRBV4S1A1TA0A5B7 DTNBP1-212ENST00000622898 1305 ntTSL 1 (best) BASIC20.13■□□□□ 0.81
TCRBV4S1A1TA0A5B7 PRELID2-207ENST00000511435 1894 ntAPPRIS ALT1 TSL 2 BASIC20.13■□□□□ 0.81
TCRBV4S1A1TA0A5B7 BX255925.1-201ENST00000566954 1854 ntBASIC20.13■□□□□ 0.81
TCRBV4S1A1TA0A5B7 ARL6IP4-211ENST00000454885 1318 ntAPPRIS ALT2 TSL 1 (best) BASIC20.12■□□□□ 0.81
TCRBV4S1A1TA0A5B7 PCK2-202ENST00000396973 1830 ntTSL 1 (best) BASIC20.12■□□□□ 0.81
TCRBV4S1A1TA0A5B7 ANKRD16-201ENST00000191063 1567 ntTSL 3 BASIC20.12■□□□□ 0.81
TCRBV4S1A1TA0A5B7 PHF20L1-207ENST00000395379 1998 ntTSL 5 BASIC20.12■□□□□ 0.81
TCRBV4S1A1TA0A5B7 VIPR2-203ENST00000402066 1926 ntAPPRIS ALT2 TSL 5 BASIC20.12■□□□□ 0.81
TCRBV4S1A1TA0A5B7 MORF4L1-203ENST00000426013 1880 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
TCRBV4S1A1TA0A5B7 MPP6-203ENST00000409761 1703 ntTSL 5 BASIC20.11■□□□□ 0.81
TCRBV4S1A1TA0A5B7 COQ2-202ENST00000311469 1641 ntAPPRIS P2 TSL 1 (best) BASIC20.11■□□□□ 0.81
TCRBV4S1A1TA0A5B7 CFAP73-201ENST00000335621 1514 ntAPPRIS P1 TSL 5 BASIC20.11■□□□□ 0.81
TCRBV4S1A1TA0A5B7 CLDND1-226ENST00000513287 999 ntAPPRIS P1 TSL 2 BASIC20.1■□□□□ 0.81
TCRBV4S1A1TA0A5B7 AC092902.2-221ENST00000628476 965 ntTSL 5 BASIC20.1■□□□□ 0.81
TCRBV4S1A1TA0A5B7 FAH-213ENST00000561421 1549 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
TCRBV4S1A1TA0A5B7 DLG3-203ENST00000374360 5905 ntAPPRIS P2 TSL 1 (best) BASIC20.09■□□□□ 0.81
TCRBV4S1A1TA0A5B7 MRAP2-201ENST00000257776 2153 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
TCRBV4S1A1TA0A5B7 ZNF276-202ENST00000443381 2267 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
TCRBV4S1A1TA0A5B7 FLJ37453-201ENST00000317122 2473 ntTSL 2 BASIC20.09■□□□□ 0.81
TCRBV4S1A1TA0A5B7 EVC-203ENST00000509451 1960 ntTSL 1 (best) BASIC20.08■□□□□ 0.81
TCRBV4S1A1TA0A5B7 ATP8B2-201ENST00000368487 1523 ntTSL 1 (best) BASIC20.08■□□□□ 0.81
TCRBV4S1A1TA0A5B7 RCOR3-202ENST00000367006 2525 ntTSL 1 (best) BASIC20.08■□□□□ 0.81
TCRBV4S1A1TA0A5B7 MXRA7-203ENST00000449428 1881 ntAPPRIS ALT2 TSL 1 (best) BASIC20.08■□□□□ 0.81
TCRBV4S1A1TA0A5B7 ABHD17AP3-201ENST00000503096 1137 ntBASIC20.08■□□□□ 0.81
TCRBV4S1A1TA0A5B7 ADAT3-201ENST00000329478 1620 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.8
TCRBV4S1A1TA0A5B7 TNFRSF25-205ENST00000377782 1632 ntAPPRIS P4 TSL 1 (best) BASIC20.08■□□□□ 0.8
TCRBV4S1A1TA0A5B7 CCDC160-202ENST00000517294 1790 ntAPPRIS P1 TSL 5 BASIC20.08■□□□□ 0.8
TCRBV4S1A1TA0A5B7 DPY19L1-209ENST00000638088 5075 ntAPPRIS ALT2 TSL 5 BASIC20.08■□□□□ 0.8
TCRBV4S1A1TA0A5B7 SHOX2-201ENST00000389589 2072 ntAPPRIS P3 TSL 1 (best) BASIC20.07■□□□□ 0.8
TCRBV4S1A1TA0A5B7 RUNDC3A-201ENST00000225441 1821 ntTSL 1 (best) BASIC20.07■□□□□ 0.8
TCRBV4S1A1TA0A5B7 FADD-201ENST00000301838 1841 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
TCRBV4S1A1TA0A5B7 SLC16A11-201ENST00000308009 1803 ntAPPRIS P2 TSL 1 (best) BASIC20.07■□□□□ 0.8
TCRBV4S1A1TA0A5B7 NPC2-207ENST00000555619 1035 ntAPPRIS P2 TSL 1 (best) BASIC20.07■□□□□ 0.8
TCRBV4S1A1TA0A5B7 PHF23-205ENST00000571362 1768 ntTSL 2 BASIC20.07■□□□□ 0.8
TCRBV4S1A1TA0A5B7 ZNF768-201ENST00000380412 2315 ntAPPRIS P2 TSL 1 (best) BASIC20.07■□□□□ 0.8
TCRBV4S1A1TA0A5B7 PSMG1-201ENST00000331573 2154 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
TCRBV4S1A1TA0A5B7 TRADD-201ENST00000345057 1877 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
TCRBV4S1A1TA0A5B7 HSD17B1P1-201ENST00000590052 955 ntBASIC20.06■□□□□ 0.8
TCRBV4S1A1TA0A5B7 DNPEP-201ENST00000273075 2425 ntAPPRIS P3 TSL 1 (best) BASIC20.06■□□□□ 0.8
TCRBV4S1A1TA0A5B7 MYCL-202ENST00000372816 1688 ntAPPRIS P3 TSL 2 BASIC20.06■□□□□ 0.8
TCRBV4S1A1TA0A5B7 PEA15-201ENST00000360472 2471 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
TCRBV4S1A1TA0A5B7 RPS20-211ENST00000524349 752 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
TCRBV4S1A1TA0A5B7 CRNDE-206ENST00000559432 587 ntTSL 3 BASIC20.05■□□□□ 0.8
TCRBV4S1A1TA0A5B7 AC009041.3-201ENST00000564390 879 ntTSL 5 BASIC20.05■□□□□ 0.8
TCRBV4S1A1TA0A5B7 EIF5A-208ENST00000573542 1089 ntAPPRIS P1 TSL 2 BASIC20.05■□□□□ 0.8
TCRBV4S1A1TA0A5B7 HMCES-202ENST00000389735 1763 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
TCRBV4S1A1TA0A5B7 RRNAD1-201ENST00000368216 2254 ntAPPRIS P3 TSL 1 (best) BASIC20.05■□□□□ 0.8
TCRBV4S1A1TA0A5B7 BCL7B-202ENST00000411832 1458 ntTSL 2 BASIC20.05■□□□□ 0.8
TCRBV4S1A1TA0A5B7 C2orf88-204ENST00000409870 1441 ntAPPRIS P1 TSL 2 BASIC20.04■□□□□ 0.8
TCRBV4S1A1TA0A5B7 RALY-201ENST00000246194 1789 ntAPPRIS P4 TSL 1 (best) BASIC20.04■□□□□ 0.8
TCRBV4S1A1TA0A5B7 U2AF1-201ENST00000291552 962 ntAPPRIS P3 TSL 1 (best) BASIC20.04■□□□□ 0.8
TCRBV4S1A1TA0A5B7 VEGFA-202ENST00000324450 954 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
TCRBV4S1A1TA0A5B7 PPP4R4-202ENST00000328839 876 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
TCRBV4S1A1TA0A5B7 VEGFA-203ENST00000372055 1286 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
TCRBV4S1A1TA0A5B7 TMEM147-202ENST00000392204 935 ntTSL 2 BASIC20.04■□□□□ 0.8
TCRBV4S1A1TA0A5B7 TSPAN4-207ENST00000397411 1025 ntAPPRIS P1 TSL 2 BASIC20.04■□□□□ 0.8
TCRBV4S1A1TA0A5B7 VEGFA-213ENST00000482630 1146 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
TCRBV4S1A1TA0A5B7 VEGFA-227ENST00000615393 984 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
TCRBV4S1A1TA0A5B7 VEGFA-228ENST00000617771 1116 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
TCRBV4S1A1TA0A5B7 U2AF1L5-202ENST00000619610 813 ntAPPRIS ALT2 TSL 1 (best) BASIC20.04■□□□□ 0.8
TCRBV4S1A1TA0A5B7 VEGFA-229ENST00000621747 1116 ntAPPRIS ALT2 TSL 1 (best) BASIC20.04■□□□□ 0.8
TCRBV4S1A1TA0A5B7 VEGFA-230ENST00000640482 1065 ntAPPRIS ALT2 TSL 1 (best) BASIC20.04■□□□□ 0.8
TCRBV4S1A1TA0A5B7 VEGFA-232ENST00000640653 1170 ntAPPRIS ALT2 TSL 1 (best) BASIC20.04■□□□□ 0.8
TCRBV4S1A1TA0A5B7 HDGFL1-201ENST00000510882 2174 ntAPPRIS P1 BASIC20.04■□□□□ 0.8
TCRBV4S1A1TA0A5B7 HDHD5-202ENST00000336737 1799 ntAPPRIS ALT2 TSL 1 (best) BASIC20.03■□□□□ 0.8
TCRBV4S1A1TA0A5B7 C1QTNF8-201ENST00000328449 1627 ntAPPRIS P1 TSL 5 BASIC20.03■□□□□ 0.8
TCRBV4S1A1TA0A5B7 SHF-208ENST00000560734 1731 ntTSL 3 BASIC20.03■□□□□ 0.8
TCRBV4S1A1TA0A5B7 AP000911.3-201ENST00000526377 1130 ntTSL 3 BASIC20.03■□□□□ 0.8
TCRBV4S1A1TA0A5B7 CREM-210ENST00000374721 2020 ntTSL 5 BASIC20.03■□□□□ 0.8
TCRBV4S1A1TA0A5B7 CCKBR-201ENST00000334619 2121 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
TCRBV4S1A1TA0A5B7 REXO4-201ENST00000371935 1899 ntTSL 3 BASIC20.03■□□□□ 0.8
TCRBV4S1A1TA0A5B7 HDGF-201ENST00000357325 2380 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
TCRBV4S1A1TA0A5B7 C16orf59-202ENST00000483320 1709 ntAPPRIS ALT2 TSL 2 BASIC20.02■□□□□ 0.8
TCRBV4S1A1TA0A5B7 CYB5R3-201ENST00000352397 2124 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
TCRBV4S1A1TA0A5B7 HSD11B1L-202ENST00000339423 1660 ntAPPRIS P3 TSL 1 (best) BASIC20.02■□□□□ 0.8
TCRBV4S1A1TA0A5B7 ABHD17C-202ENST00000558464 1976 ntTSL 1 (best) BASIC20.02■□□□□ 0.8
TCRBV4S1A1TA0A5B7 AC135983.2-203ENST00000454486 1613 ntBASIC20.02■□□□□ 0.79
TCRBV4S1A1TA0A5B7 SURF1-201ENST00000371974 1093 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
TCRBV4S1A1TA0A5B7 CLTA-207ENST00000470744 1102 ntTSL 2 BASIC20.01■□□□□ 0.79
TCRBV4S1A1TA0A5B7 SURF1-205ENST00000615505 991 ntTSL 1 (best) BASIC20.01■□□□□ 0.79
TCRBV4S1A1TA0A5B7 RAB40C-204ENST00000538492 2569 ntAPPRIS P1 TSL 2 BASIC20.01■□□□□ 0.79
TCRBV4S1A1TA0A5B7 CAMKK1-201ENST00000158166 2459 ntTSL 1 (best) BASIC20.01■□□□□ 0.79
TCRBV4S1A1TA0A5B7 WHAMMP2-203ENST00000563942 1603 ntBASIC20.01■□□□□ 0.79
TCRBV4S1A1TA0A5B7 MAGI2-215ENST00000628980 6212 ntTSL 5 BASIC20.01■□□□□ 0.79
TCRBV4S1A1TA0A5B7 FAM107B-205ENST00000378467 2374 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
TCRBV4S1A1TA0A5B7 FAM168B-201ENST00000389915 944 ntAPPRIS P1 TSL 3 BASIC20■□□□□ 0.79
TCRBV4S1A1TA0A5B7 AC073111.5-206ENST00000642087 859 ntAPPRIS P1 BASIC20■□□□□ 0.79
TCRBV4S1A1TA0A5B7 POLR3H-201ENST00000337566 1330 ntTSL 1 (best) BASIC20■□□□□ 0.79
TCRBV4S1A1TA0A5B7 FKBP1A-205ENST00000439640 1583 ntTSL 3 BASIC20■□□□□ 0.79
TCRBV4S1A1TA0A5B7 SLC25A6-201ENST00000381401 2062 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
TCRBV4S1A1TA0A5B7 LINC01003-201ENST00000564834 1764 ntBASIC19.99■□□□□ 0.79
TCRBV4S1A1TA0A5B7 MRPL51-201ENST00000229238 1234 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
TCRBV4S1A1TA0A5B7 BRD4-212ENST00000630599 726 ntTSL 2 BASIC19.99■□□□□ 0.79
TCRBV4S1A1TA0A5B7 DNAJC21-201ENST00000342382 2309 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
Retrieved 100 of 98,524 protein–RNA pairs in 11 ms