Protein–RNA interactions for Protein: A0A0B4J268

TRAV4, T-cell receptor alpha variable 4 (Fragment), humanhuman

Predictions only

Length 109 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV4A0A0B4J268 OVOL2-201ENST00000278780 1555 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
TRAV4A0A0B4J268 PLEKHJ1-201ENST00000326631 1206 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
TRAV4A0A0B4J268 MRPL9-201ENST00000368829 882 ntAPPRIS ALT2 TSL 2 BASIC17.99■□□□□ 0.47
TRAV4A0A0B4J268 AL589765.4-201ENST00000512280 382 ntTSL 3 BASIC17.99■□□□□ 0.47
TRAV4A0A0B4J268 QKI-207ENST00000453779 5685 ntTSL 1 (best) BASIC17.99■□□□□ 0.47
TRAV4A0A0B4J268 ROM1-201ENST00000278833 1878 ntAPPRIS P2 TSL 1 (best) BASIC17.99■□□□□ 0.47
TRAV4A0A0B4J268 ZDHHC16-201ENST00000345745 1519 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
TRAV4A0A0B4J268 TGFBRAP1-202ENST00000393359 5979 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
TRAV4A0A0B4J268 TCAM1P-201ENST00000463377 452 ntTSL 3 BASIC17.98■□□□□ 0.47
TRAV4A0A0B4J268 GSX2-202ENST00000503800 1181 ntTSL 5 BASIC17.98■□□□□ 0.47
TRAV4A0A0B4J268 BCAP31-201ENST00000345046 1589 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
TRAV4A0A0B4J268 CD6-206ENST00000452451 1782 ntAPPRIS ALT2 TSL 1 (best) BASIC17.98■□□□□ 0.47
TRAV4A0A0B4J268 HDGFL1-201ENST00000510882 2174 ntAPPRIS P1 BASIC17.98■□□□□ 0.47
TRAV4A0A0B4J268 ZNF639-209ENST00000496856 2033 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
TRAV4A0A0B4J268 C11orf80-210ENST00000527634 1666 ntAPPRIS ALT2 TSL 5 BASIC17.97■□□□□ 0.47
TRAV4A0A0B4J268 FBXL8-206ENST00000519917 1460 ntAPPRIS P1 TSL 5 BASIC17.97■□□□□ 0.47
TRAV4A0A0B4J268 PSMG1-201ENST00000331573 2154 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
TRAV4A0A0B4J268 AL121749.1-202ENST00000609313 2153 ntBASIC17.97■□□□□ 0.47
TRAV4A0A0B4J268 FAM120AOS-202ENST00000423591 1800 ntAPPRIS ALT2 TSL 1 (best) BASIC17.96■□□□□ 0.47
TRAV4A0A0B4J268 MACROD1-201ENST00000255681 1205 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
TRAV4A0A0B4J268 RPS2P35-201ENST00000443417 897 ntBASIC17.96■□□□□ 0.47
TRAV4A0A0B4J268 ACAA1-220ENST00000627515 1862 ntTSL 5 BASIC17.96■□□□□ 0.47
TRAV4A0A0B4J268 DDAH2-212ENST00000375789 1688 ntAPPRIS P1 TSL 2 BASIC17.96■□□□□ 0.47
TRAV4A0A0B4J268 DDAH2-213ENST00000375792 1688 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
TRAV4A0A0B4J268 NAPA-201ENST00000263354 1839 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
TRAV4A0A0B4J268 KCNQ3-202ENST00000519445 2801 ntAPPRIS ALT2 TSL 5 BASIC17.95■□□□□ 0.46
TRAV4A0A0B4J268 TXNL4A-208ENST00000588162 752 ntTSL 2 BASIC17.95■□□□□ 0.46
TRAV4A0A0B4J268 NPB-202ENST00000573081 2154 ntAPPRIS ALT2 BASIC17.95■□□□□ 0.46
TRAV4A0A0B4J268 CTSA-203ENST00000372459 1972 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
TRAV4A0A0B4J268 NPHP3-202ENST00000383282 782 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
TRAV4A0A0B4J268 DCUN1D5-201ENST00000260247 1337 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
TRAV4A0A0B4J268 AC110285.7-201ENST00000624417 1536 ntBASIC17.93■□□□□ 0.46
TRAV4A0A0B4J268 C14orf80-203ENST00000354560 1553 ntAPPRIS ALT2 TSL 1 (best) BASIC17.93■□□□□ 0.46
TRAV4A0A0B4J268 LYPD6B-203ENST00000409642 1577 ntAPPRIS P3 TSL 1 (best) BASIC17.93■□□□□ 0.46
TRAV4A0A0B4J268 NME2-202ENST00000393190 866 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
TRAV4A0A0B4J268 AP000251.1-201ENST00000433071 822 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
TRAV4A0A0B4J268 FADD-201ENST00000301838 1841 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
TRAV4A0A0B4J268 SLC35D2-202ENST00000375257 889 ntTSL 2 BASIC17.92■□□□□ 0.46
TRAV4A0A0B4J268 NR6A1-203ENST00000416460 1898 ntAPPRIS ALT2 TSL 1 (best) BASIC17.92■□□□□ 0.46
TRAV4A0A0B4J268 F8A1-201ENST00000610495 1713 ntAPPRIS P1 BASIC17.92■□□□□ 0.46
TRAV4A0A0B4J268 C11orf80-204ENST00000525908 2135 ntAPPRIS P3 TSL 2 BASIC17.92■□□□□ 0.46
TRAV4A0A0B4J268 SETBP1-202ENST00000426838 1785 ntAPPRIS ALT2 TSL 1 (best) BASIC17.91■□□□□ 0.46
TRAV4A0A0B4J268 CPTP-201ENST00000343938 2190 ntAPPRIS P1 TSL 2 BASIC17.91■□□□□ 0.46
TRAV4A0A0B4J268 GSC-201ENST00000238558 1264 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
TRAV4A0A0B4J268 AC004540.2-201ENST00000451368 611 ntTSL 2 BASIC17.91■□□□□ 0.46
TRAV4A0A0B4J268 NDEL1-202ENST00000380025 2181 ntTSL 5 BASIC17.91■□□□□ 0.46
TRAV4A0A0B4J268 SSBP3-202ENST00000357475 1533 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
TRAV4A0A0B4J268 CARM1-202ENST00000344150 2722 ntAPPRIS ALT2 TSL 5 BASIC17.91■□□□□ 0.46
TRAV4A0A0B4J268 LMO2-201ENST00000257818 2294 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
TRAV4A0A0B4J268 BBC3-204ENST00000449228 1827 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
TRAV4A0A0B4J268 PHF23-205ENST00000571362 1768 ntTSL 2 BASIC17.9■□□□□ 0.46
TRAV4A0A0B4J268 CMC4-202ENST00000369484 1107 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
TRAV4A0A0B4J268 PABPC1L2B-AS1-201ENST00000416989 1167 ntTSL 3 BASIC17.9■□□□□ 0.46
TRAV4A0A0B4J268 AL662864.1-201ENST00000454388 1167 ntTSL 3 BASIC17.9■□□□□ 0.46
TRAV4A0A0B4J268 AL451007.3-201ENST00000640271 588 ntAPPRIS P1 BASIC17.9■□□□□ 0.46
TRAV4A0A0B4J268 SLC25A6-201ENST00000381401 2062 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
TRAV4A0A0B4J268 MXRA7-202ENST00000375036 1950 ntAPPRIS ALT2 TSL 2 BASIC17.9■□□□□ 0.46
TRAV4A0A0B4J268 DACT2-202ENST00000366796 2028 ntAPPRIS ALT2 TSL 1 (best) BASIC17.89■□□□□ 0.46
TRAV4A0A0B4J268 HAND2-201ENST00000359562 2780 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
TRAV4A0A0B4J268 UCK1-204ENST00000372215 2167 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
TRAV4A0A0B4J268 PARD6A-202ENST00000458121 1260 ntAPPRIS ALT1 TSL 1 (best) BASIC17.89■□□□□ 0.45
TRAV4A0A0B4J268 HGH1-207ENST00000628266 258 ntTSL 5 BASIC17.89■□□□□ 0.45
TRAV4A0A0B4J268 SNTB1-202ENST00000517992 2273 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
TRAV4A0A0B4J268 C14orf80-205ENST00000392523 1845 ntAPPRIS ALT2 TSL 1 (best) BASIC17.88■□□□□ 0.45
TRAV4A0A0B4J268 DCDC2C-201ENST00000399143 1476 ntAPPRIS P1 TSL 5 BASIC17.88■□□□□ 0.45
TRAV4A0A0B4J268 ESRRA-203ENST00000406310 2218 ntAPPRIS ALT1 TSL 1 (best) BASIC17.88■□□□□ 0.45
TRAV4A0A0B4J268 TAZ-201ENST00000369776 1596 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
TRAV4A0A0B4J268 HOMER3-202ENST00000392351 1557 ntAPPRIS P3 TSL 1 (best) BASIC17.88■□□□□ 0.45
TRAV4A0A0B4J268 RAD21-AS1-201ENST00000521487 2010 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
TRAV4A0A0B4J268 NSMCE4A-201ENST00000369017 1224 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
TRAV4A0A0B4J268 TMEM147-202ENST00000392204 935 ntTSL 2 BASIC17.88■□□□□ 0.45
TRAV4A0A0B4J268 AC231981.1-201ENST00000450917 974 ntTSL 3 BASIC17.88■□□□□ 0.45
TRAV4A0A0B4J268 RAB3IL1-202ENST00000394836 2284 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
TRAV4A0A0B4J268 ZNF768-201ENST00000380412 2315 ntAPPRIS P2 TSL 1 (best) BASIC17.88■□□□□ 0.45
TRAV4A0A0B4J268 CCDC136-206ENST00000464832 1720 ntAPPRIS ALT2 TSL 5 BASIC17.87■□□□□ 0.45
TRAV4A0A0B4J268 RNF19B-201ENST00000235150 2334 ntAPPRIS ALT2 TSL 1 (best) BASIC17.87■□□□□ 0.45
TRAV4A0A0B4J268 DNAJC21-201ENST00000342382 2309 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
TRAV4A0A0B4J268 GPR25-201ENST00000304244 1224 ntAPPRIS P1 BASIC17.87■□□□□ 0.45
TRAV4A0A0B4J268 REPIN1-204ENST00000466559 1022 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
TRAV4A0A0B4J268 PEX7-203ENST00000541292 945 ntTSL 5 BASIC17.87■□□□□ 0.45
TRAV4A0A0B4J268 ANKRD16-201ENST00000191063 1567 ntTSL 3 BASIC17.87■□□□□ 0.45
TRAV4A0A0B4J268 AC116407.1-201ENST00000398832 1599 ntTSL 2 BASIC17.87■□□□□ 0.45
TRAV4A0A0B4J268 BHLHE23-201ENST00000370346 1057 ntAPPRIS P1 BASIC17.86■□□□□ 0.45
TRAV4A0A0B4J268 C11orf95-204ENST00000546282 390 ntTSL 3 BASIC17.86■□□□□ 0.45
TRAV4A0A0B4J268 LINC01971-201ENST00000617888 1048 ntBASIC17.86■□□□□ 0.45
TRAV4A0A0B4J268 TSPAN3-203ENST00000424443 1530 ntTSL 2 BASIC17.86■□□□□ 0.45
TRAV4A0A0B4J268 CCNG2-201ENST00000316355 5526 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
TRAV4A0A0B4J268 LSM14B-204ENST00000370915 1079 ntTSL 1 (best) BASIC17.85■□□□□ 0.45
TRAV4A0A0B4J268 ANKRD53-203ENST00000441349 1797 ntTSL 5 BASIC17.85■□□□□ 0.45
TRAV4A0A0B4J268 FKBP1A-210ENST00000614856 562 ntTSL 2 BASIC17.85■□□□□ 0.45
TRAV4A0A0B4J268 PIK3R2-207ENST00000617130 2187 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
TRAV4A0A0B4J268 NELFB-202ENST00000634710 1887 ntAPPRIS P2 TSL 1 (best) BASIC17.85■□□□□ 0.45
TRAV4A0A0B4J268 THAP4-204ENST00000407315 2367 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
TRAV4A0A0B4J268 FRAT2-201ENST00000371019 2213 ntAPPRIS P1 BASIC17.84■□□□□ 0.45
TRAV4A0A0B4J268 CYB5R3-201ENST00000352397 2124 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
TRAV4A0A0B4J268 CCND3-202ENST00000372988 2133 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
TRAV4A0A0B4J268 NTN3-201ENST00000293973 1986 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
TRAV4A0A0B4J268 CAMKK1-201ENST00000158166 2459 ntTSL 1 (best) BASIC17.83■□□□□ 0.45
TRAV4A0A0B4J268 MRAP2-201ENST00000257776 2153 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.45
TRAV4A0A0B4J268 CLK2-203ENST00000368361 2166 ntAPPRIS ALT1 TSL 1 (best) BASIC17.83■□□□□ 0.45
Retrieved 100 of 98,524 protein–RNA pairs in 95.4 ms