Protein–RNA interactions for Protein: A0A0B4J235

TRAV13-2, T-cell receptor alpha variable 13-2 (Fragment), humanhuman

Predictions only

Length 113 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV13-2A0A0B4J235 TSPOAP1-AS1-205ENST00000580022 2337 ntTSL 2 BASIC16.58■□□□□ 0.25
TRAV13-2A0A0B4J235 TIGD5-201ENST00000504548 5390 ntAPPRIS P1 BASIC16.58■□□□□ 0.24
TRAV13-2A0A0B4J235 SP5-201ENST00000375281 2033 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
TRAV13-2A0A0B4J235 TSEN34-204ENST00000429671 1912 ntTSL 2 BASIC16.57■□□□□ 0.24
TRAV13-2A0A0B4J235 RINL-202ENST00000591812 1910 ntAPPRIS ALT2 TSL 2 BASIC16.57■□□□□ 0.24
TRAV13-2A0A0B4J235 PPM1B-202ENST00000345249 1713 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
TRAV13-2A0A0B4J235 AGPAT2-202ENST00000371696 1512 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
TRAV13-2A0A0B4J235 ARID1B-220ENST00000636930 8246 ntAPPRIS ALT2 TSL 2 BASIC16.57■□□□□ 0.24
TRAV13-2A0A0B4J235 ASAP2-201ENST00000281419 5712 ntAPPRIS P3 TSL 1 (best) BASIC16.57■□□□□ 0.24
TRAV13-2A0A0B4J235 DAZAP1-202ENST00000336761 2290 ntTSL 5 BASIC16.57■□□□□ 0.24
TRAV13-2A0A0B4J235 KLC1-203ENST00000347839 2271 ntTSL 5 BASIC16.57■□□□□ 0.24
TRAV13-2A0A0B4J235 TBC1D10A-201ENST00000215790 2077 ntAPPRIS P3 TSL 1 (best) BASIC16.57■□□□□ 0.24
TRAV13-2A0A0B4J235 ANKS1B-202ENST00000333732 1675 ntTSL 2 BASIC16.56■□□□□ 0.24
TRAV13-2A0A0B4J235 NRXN2-205ENST00000409571 6381 ntAPPRIS ALT2 TSL 5 BASIC16.56■□□□□ 0.24
TRAV13-2A0A0B4J235 ERMP1-202ENST00000339450 5376 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
TRAV13-2A0A0B4J235 SNX5-201ENST00000377759 2270 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
TRAV13-2A0A0B4J235 RALY-201ENST00000246194 1789 ntAPPRIS P4 TSL 1 (best) BASIC16.56■□□□□ 0.24
TRAV13-2A0A0B4J235 MYCL-202ENST00000372816 1688 ntAPPRIS P3 TSL 2 BASIC16.56■□□□□ 0.24
TRAV13-2A0A0B4J235 PIP5K1C-203ENST00000539785 2289 ntAPPRIS ALT2 TSL 2 BASIC16.56■□□□□ 0.24
TRAV13-2A0A0B4J235 ECI1-207ENST00000570258 1512 ntAPPRIS ALT2 TSL 5 BASIC16.55■□□□□ 0.24
TRAV13-2A0A0B4J235 NRXN2-203ENST00000377551 6373 ntAPPRIS P3 TSL 1 (best) BASIC16.55■□□□□ 0.24
TRAV13-2A0A0B4J235 CDPF1-201ENST00000314567 1875 ntAPPRIS P2 TSL 1 (best) BASIC16.55■□□□□ 0.24
TRAV13-2A0A0B4J235 NPAS3-206ENST00000548645 2926 ntAPPRIS ALT2 TSL 1 (best) BASIC16.55■□□□□ 0.24
TRAV13-2A0A0B4J235 IGDCC4-201ENST00000352385 6508 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
TRAV13-2A0A0B4J235 HAS1-205ENST00000601714 2086 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
TRAV13-2A0A0B4J235 SPTBN4-201ENST00000338932 8686 ntAPPRIS ALT1 TSL 5 BASIC16.55■□□□□ 0.24
TRAV13-2A0A0B4J235 GSX1-201ENST00000302945 1663 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
TRAV13-2A0A0B4J235 UNCX-201ENST00000316333 2048 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
TRAV13-2A0A0B4J235 LINC01578-201ENST00000553829 732 ntTSL 2 BASIC16.54■□□□□ 0.24
TRAV13-2A0A0B4J235 TBCC-201ENST00000372876 1616 ntAPPRIS P1 BASIC16.54■□□□□ 0.24
TRAV13-2A0A0B4J235 DLX2-202ENST00000466293 1852 ntTSL 2 BASIC16.54■□□□□ 0.24
TRAV13-2A0A0B4J235 NRARP-201ENST00000356628 1770 ntAPPRIS P1 BASIC16.54■□□□□ 0.24
TRAV13-2A0A0B4J235 STUB1-205ENST00000565677 1560 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
TRAV13-2A0A0B4J235 RILPL1-205ENST00000636882 2258 ntTSL 5 BASIC16.53■□□□□ 0.24
TRAV13-2A0A0B4J235 PRELID2-207ENST00000511435 1894 ntAPPRIS ALT1 TSL 2 BASIC16.52■□□□□ 0.24
TRAV13-2A0A0B4J235 SLC9A3-201ENST00000264938 2584 ntAPPRIS P3 TSL 1 (best) BASIC16.52■□□□□ 0.24
TRAV13-2A0A0B4J235 ATP5G2-208ENST00000552242 1950 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
TRAV13-2A0A0B4J235 LTK-203ENST00000453182 2412 ntTSL 2 BASIC16.52■□□□□ 0.24
TRAV13-2A0A0B4J235 GNG4-203ENST00000391854 5104 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.23
TRAV13-2A0A0B4J235 AC109460.3-201ENST00000569969 5296 ntTSL 2 BASIC16.52■□□□□ 0.23
TRAV13-2A0A0B4J235 CTBP2-211ENST00000494626 2014 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.23
TRAV13-2A0A0B4J235 CD6-206ENST00000452451 1782 ntAPPRIS ALT2 TSL 1 (best) BASIC16.51■□□□□ 0.23
TRAV13-2A0A0B4J235 NRG1-210ENST00000520407 1955 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
TRAV13-2A0A0B4J235 IRAK1-205ENST00000429936 2127 ntTSL 5 BASIC16.51■□□□□ 0.23
TRAV13-2A0A0B4J235 SV2B-203ENST00000545111 2099 ntTSL 2 BASIC16.51■□□□□ 0.23
TRAV13-2A0A0B4J235 APLP1-201ENST00000221891 2495 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
TRAV13-2A0A0B4J235 NRGN-201ENST00000284292 1306 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
TRAV13-2A0A0B4J235 PICALM-202ENST00000393346 2340 ntAPPRIS P3 TSL 1 (best) BASIC16.5■□□□□ 0.23
TRAV13-2A0A0B4J235 ARMC10-202ENST00000323716 2635 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
TRAV13-2A0A0B4J235 TMEM268-202ENST00000374049 4578 ntAPPRIS ALT1 TSL 5 BASIC16.49■□□□□ 0.23
TRAV13-2A0A0B4J235 MAZ-203ENST00000545521 2333 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
TRAV13-2A0A0B4J235 FGF2-203ENST00000614010 867 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
TRAV13-2A0A0B4J235 GRK6-206ENST00000507633 1660 ntTSL 5 BASIC16.49■□□□□ 0.23
TRAV13-2A0A0B4J235 GCLC-209ENST00000514004 2356 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
TRAV13-2A0A0B4J235 USP12-201ENST00000282344 4511 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
TRAV13-2A0A0B4J235 NRXN1-205ENST00000401710 2873 ntTSL 5 BASIC16.48■□□□□ 0.23
TRAV13-2A0A0B4J235 PURG-202ENST00000475541 2875 ntAPPRIS P1 BASIC16.48■□□□□ 0.23
TRAV13-2A0A0B4J235 FOXF2-201ENST00000259806 2187 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
TRAV13-2A0A0B4J235 DNPEP-201ENST00000273075 2425 ntAPPRIS P3 TSL 1 (best) BASIC16.48■□□□□ 0.23
TRAV13-2A0A0B4J235 TMEM185A-208ENST00000611119 2662 ntTSL 2 BASIC16.48■□□□□ 0.23
TRAV13-2A0A0B4J235 PTPRJ-201ENST00000418331 5122 ntAPPRIS P2 TSL 1 (best) BASIC16.48■□□□□ 0.23
TRAV13-2A0A0B4J235 DHFR-203ENST00000505337 1719 ntAPPRIS P1 TSL 2 BASIC16.48■□□□□ 0.23
TRAV13-2A0A0B4J235 PDIA6-201ENST00000272227 2338 ntAPPRIS P3 TSL 1 (best) BASIC16.47■□□□□ 0.23
TRAV13-2A0A0B4J235 EML6-201ENST00000356458 8320 ntAPPRIS P1 TSL 5 BASIC16.47■□□□□ 0.23
TRAV13-2A0A0B4J235 RUNX2-210ENST00000576263 2256 ntTSL 5 BASIC16.47■□□□□ 0.23
TRAV13-2A0A0B4J235 TRIM54-201ENST00000296098 2027 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
TRAV13-2A0A0B4J235 AC079848.1-201ENST00000511301 327 ntTSL 3 BASIC16.47■□□□□ 0.23
TRAV13-2A0A0B4J235 KLF15-201ENST00000296233 2574 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
TRAV13-2A0A0B4J235 RABL6-202ENST00000357466 1820 ntAPPRIS ALT2 TSL 1 (best) BASIC16.47■□□□□ 0.23
TRAV13-2A0A0B4J235 BBC3-204ENST00000449228 1827 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
TRAV13-2A0A0B4J235 NTN1-201ENST00000173229 5954 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
TRAV13-2A0A0B4J235 GSTZ1-201ENST00000216465 1338 ntAPPRIS P2 TSL 1 (best) BASIC16.46■□□□□ 0.23
TRAV13-2A0A0B4J235 BAMBI-201ENST00000375533 1877 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
TRAV13-2A0A0B4J235 LINC00588-201ENST00000521663 1875 ntTSL 2 BASIC16.46■□□□□ 0.23
TRAV13-2A0A0B4J235 WASH5P-204ENST00000632292 975 ntBASIC16.46■□□□□ 0.23
TRAV13-2A0A0B4J235 SPIRE2-205ENST00000563972 1823 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
TRAV13-2A0A0B4J235 RARA-203ENST00000394086 2008 ntTSL 2 BASIC16.46■□□□□ 0.23
TRAV13-2A0A0B4J235 TRIOBP-203ENST00000403663 2324 ntAPPRIS ALT2 TSL 1 (best) BASIC16.46■□□□□ 0.23
TRAV13-2A0A0B4J235 GDF1-201ENST00000247005 2517 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.22
TRAV13-2A0A0B4J235 DYRK1B-201ENST00000323039 2535 ntAPPRIS P3 TSL 1 (best) BASIC16.46■□□□□ 0.22
TRAV13-2A0A0B4J235 CERS1-204ENST00000623882 2517 ntTSL 1 (best) BASIC16.46■□□□□ 0.22
TRAV13-2A0A0B4J235 GTPBP3-202ENST00000358792 1951 ntAPPRIS P4 TSL 2 BASIC16.46■□□□□ 0.22
TRAV13-2A0A0B4J235 HOXA4-204ENST00000610970 1728 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
TRAV13-2A0A0B4J235 FLT1-202ENST00000539099 1911 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
TRAV13-2A0A0B4J235 RAB11FIP4-211ENST00000621161 8628 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
TRAV13-2A0A0B4J235 PANK1-201ENST00000307534 6976 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
TRAV13-2A0A0B4J235 RTN2-208ENST00000590526 2357 ntTSL 5 BASIC16.45■□□□□ 0.22
TRAV13-2A0A0B4J235 PCSK6-218ENST00000619160 3093 ntAPPRIS ALT2 TSL 1 (best) BASIC16.44■□□□□ 0.22
TRAV13-2A0A0B4J235 MORF4L1-203ENST00000426013 1880 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
TRAV13-2A0A0B4J235 DUSP8P4-201ENST00000399538 1761 ntBASIC16.44■□□□□ 0.22
TRAV13-2A0A0B4J235 NECTIN2-202ENST00000252485 2112 ntAPPRIS P3 TSL 1 (best) BASIC16.44■□□□□ 0.22
TRAV13-2A0A0B4J235 HMGB1-205ENST00000399494 1282 ntAPPRIS P1 TSL 2 BASIC16.44■□□□□ 0.22
TRAV13-2A0A0B4J235 PINK1-201ENST00000321556 2660 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
TRAV13-2A0A0B4J235 HNRNPL-201ENST00000221419 2471 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
TRAV13-2A0A0B4J235 USP25-203ENST00000351097 2158 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
TRAV13-2A0A0B4J235 ECI1-201ENST00000301729 1541 ntAPPRIS P2 TSL 1 (best) BASIC16.44■□□□□ 0.22
TRAV13-2A0A0B4J235 RBAK-202ENST00000396912 6551 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
TRAV13-2A0A0B4J235 HABP4-202ENST00000375251 2304 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
TRAV13-2A0A0B4J235 FKBP1A-205ENST00000439640 1583 ntTSL 3 BASIC16.43■□□□□ 0.22
TRAV13-2A0A0B4J235 FEZ2-204ENST00000405912 1931 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
Retrieved 100 of 98,524 protein–RNA pairs in 21.4 ms