Protein–RNA interactions for Protein: A0A075B6T6

TRAV12-2, T-cell receptor alpha variable 12-2 (Fragment), humanhuman

Predictions only

Length 113 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV12-2A0A075B6T6 APLP1-201ENST00000221891 2495 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
TRAV12-2A0A075B6T6 MTMR1-202ENST00000370390 2755 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
TRAV12-2A0A075B6T6 ACAA1-220ENST00000627515 1862 ntTSL 5 BASIC18.58■□□□□ 0.57
TRAV12-2A0A075B6T6 PWWP2B-201ENST00000305233 2651 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.57
TRAV12-2A0A075B6T6 NDEL1-202ENST00000380025 2181 ntTSL 5 BASIC18.58■□□□□ 0.57
TRAV12-2A0A075B6T6 AP000251.1-201ENST00000433071 822 ntTSL 1 (best) BASIC18.58■□□□□ 0.56
TRAV12-2A0A075B6T6 SSBP3-202ENST00000357475 1533 ntTSL 1 (best) BASIC18.58■□□□□ 0.56
TRAV12-2A0A075B6T6 ZNF768-201ENST00000380412 2315 ntAPPRIS P2 TSL 1 (best) BASIC18.57■□□□□ 0.56
TRAV12-2A0A075B6T6 GSX2-202ENST00000503800 1181 ntTSL 5 BASIC18.57■□□□□ 0.56
TRAV12-2A0A075B6T6 ZDHHC16-201ENST00000345745 1519 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
TRAV12-2A0A075B6T6 AC110285.7-201ENST00000624417 1536 ntBASIC18.57■□□□□ 0.56
TRAV12-2A0A075B6T6 CD6-206ENST00000452451 1782 ntAPPRIS ALT2 TSL 1 (best) BASIC18.57■□□□□ 0.56
TRAV12-2A0A075B6T6 VIPR2-203ENST00000402066 1926 ntAPPRIS ALT2 TSL 5 BASIC18.57■□□□□ 0.56
TRAV12-2A0A075B6T6 RCOR3-202ENST00000367006 2525 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
TRAV12-2A0A075B6T6 FLJ37453-201ENST00000317122 2473 ntTSL 2 BASIC18.56■□□□□ 0.56
TRAV12-2A0A075B6T6 TCAM1P-201ENST00000463377 452 ntTSL 3 BASIC18.56■□□□□ 0.56
TRAV12-2A0A075B6T6 ZNF706-207ENST00000519882 959 ntAPPRIS P1 TSL 3 BASIC18.56■□□□□ 0.56
TRAV12-2A0A075B6T6 ZNF706-213ENST00000521272 732 ntAPPRIS P1 TSL 5 BASIC18.56■□□□□ 0.56
TRAV12-2A0A075B6T6 C11orf80-204ENST00000525908 2135 ntAPPRIS P3 TSL 2 BASIC18.56■□□□□ 0.56
TRAV12-2A0A075B6T6 CPTP-201ENST00000343938 2190 ntAPPRIS P1 TSL 2 BASIC18.55■□□□□ 0.56
TRAV12-2A0A075B6T6 UCK1-204ENST00000372215 2167 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
TRAV12-2A0A075B6T6 BHLHE23-201ENST00000370346 1057 ntAPPRIS P1 BASIC18.55■□□□□ 0.56
TRAV12-2A0A075B6T6 LSM14B-204ENST00000370915 1079 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
TRAV12-2A0A075B6T6 FRAT2-201ENST00000371019 2213 ntAPPRIS P1 BASIC18.55■□□□□ 0.56
TRAV12-2A0A075B6T6 CTSA-203ENST00000372459 1972 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
TRAV12-2A0A075B6T6 RTN2-202ENST00000344680 2063 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
TRAV12-2A0A075B6T6 CLK2-203ENST00000368361 2166 ntAPPRIS ALT1 TSL 1 (best) BASIC18.54■□□□□ 0.56
TRAV12-2A0A075B6T6 RAB3IL1-202ENST00000394836 2284 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
TRAV12-2A0A075B6T6 AC018358.1-201ENST00000631079 1402 ntBASIC18.54■□□□□ 0.56
TRAV12-2A0A075B6T6 SHF-208ENST00000560734 1731 ntTSL 3 BASIC18.54■□□□□ 0.56
TRAV12-2A0A075B6T6 FAM120AOS-202ENST00000423591 1800 ntAPPRIS ALT2 TSL 1 (best) BASIC18.53■□□□□ 0.56
TRAV12-2A0A075B6T6 PPP1R26-201ENST00000356818 4932 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
TRAV12-2A0A075B6T6 TRAM2-AS1-201ENST00000453216 664 ntTSL 3 BASIC18.53■□□□□ 0.56
TRAV12-2A0A075B6T6 REPIN1-204ENST00000466559 1022 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
TRAV12-2A0A075B6T6 PIK3R2-207ENST00000617130 2187 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
TRAV12-2A0A075B6T6 TMEM64-201ENST00000418210 4663 ntTSL 2 BASIC18.52■□□□□ 0.56
TRAV12-2A0A075B6T6 F8A1-201ENST00000610495 1713 ntAPPRIS P1 BASIC18.52■□□□□ 0.55
TRAV12-2A0A075B6T6 DACT2-202ENST00000366796 2028 ntAPPRIS ALT2 TSL 1 (best) BASIC18.51■□□□□ 0.55
TRAV12-2A0A075B6T6 DCDC2C-201ENST00000399143 1476 ntAPPRIS P1 TSL 5 BASIC18.51■□□□□ 0.55
TRAV12-2A0A075B6T6 RUNX2-203ENST00000371436 1588 ntAPPRIS ALT2 TSL 5 BASIC18.51■□□□□ 0.55
TRAV12-2A0A075B6T6 PEA15-201ENST00000360472 2471 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
TRAV12-2A0A075B6T6 ZFAND2B-206ENST00000409336 944 ntAPPRIS P1 TSL 5 BASIC18.5■□□□□ 0.55
TRAV12-2A0A075B6T6 ZFAND2B-221ENST00000621130 1070 ntTSL 5 BASIC18.5■□□□□ 0.55
TRAV12-2A0A075B6T6 RAD21-AS1-201ENST00000521487 2010 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
TRAV12-2A0A075B6T6 CCNG2-201ENST00000316355 5526 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
TRAV12-2A0A075B6T6 CCKBR-201ENST00000334619 2121 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
TRAV12-2A0A075B6T6 HOMER3-202ENST00000392351 1557 ntAPPRIS P3 TSL 1 (best) BASIC18.5■□□□□ 0.55
TRAV12-2A0A075B6T6 ROM1-201ENST00000278833 1878 ntAPPRIS P2 TSL 1 (best) BASIC18.5■□□□□ 0.55
TRAV12-2A0A075B6T6 RNF19B-201ENST00000235150 2334 ntAPPRIS ALT2 TSL 1 (best) BASIC18.49■□□□□ 0.55
TRAV12-2A0A075B6T6 AHSA2-201ENST00000357022 2437 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
TRAV12-2A0A075B6T6 C11orf95-204ENST00000546282 390 ntTSL 3 BASIC18.49■□□□□ 0.55
TRAV12-2A0A075B6T6 TXNL4A-208ENST00000588162 752 ntTSL 2 BASIC18.49■□□□□ 0.55
TRAV12-2A0A075B6T6 FBXL8-206ENST00000519917 1460 ntAPPRIS P1 TSL 5 BASIC18.49■□□□□ 0.55
TRAV12-2A0A075B6T6 SETBP1-202ENST00000426838 1785 ntAPPRIS ALT2 TSL 1 (best) BASIC18.49■□□□□ 0.55
TRAV12-2A0A075B6T6 MXRA7-202ENST00000375036 1950 ntAPPRIS ALT2 TSL 2 BASIC18.49■□□□□ 0.55
TRAV12-2A0A075B6T6 TANGO2-214ENST00000447208 2086 ntTSL 3 BASIC18.49■□□□□ 0.55
TRAV12-2A0A075B6T6 SNTB1-202ENST00000517992 2273 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
TRAV12-2A0A075B6T6 TADA2B-201ENST00000310074 4350 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
TRAV12-2A0A075B6T6 FADD-201ENST00000301838 1841 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
TRAV12-2A0A075B6T6 FAM66E-202ENST00000533615 2087 ntTSL 2 BASIC18.48■□□□□ 0.55
TRAV12-2A0A075B6T6 CYB5R3-201ENST00000352397 2124 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
TRAV12-2A0A075B6T6 PKM-203ENST00000389093 2279 ntTSL 5 BASIC18.47■□□□□ 0.55
TRAV12-2A0A075B6T6 C14orf80-205ENST00000392523 1845 ntAPPRIS ALT2 TSL 1 (best) BASIC18.47■□□□□ 0.55
TRAV12-2A0A075B6T6 KCNJ4-201ENST00000303592 2065 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
TRAV12-2A0A075B6T6 MLEC-202ENST00000412616 841 ntTSL 3 BASIC18.47■□□□□ 0.55
TRAV12-2A0A075B6T6 AC231981.1-201ENST00000450917 974 ntTSL 3 BASIC18.47■□□□□ 0.55
TRAV12-2A0A075B6T6 LINC01971-201ENST00000617888 1048 ntBASIC18.47■□□□□ 0.55
TRAV12-2A0A075B6T6 NPAS3-201ENST00000346562 5847 ntAPPRIS P3 TSL 1 (best) BASIC18.47■□□□□ 0.55
TRAV12-2A0A075B6T6 OTUD5-208ENST00000610466 2487 ntTSL 5 BASIC18.47■□□□□ 0.55
TRAV12-2A0A075B6T6 C8orf58-202ENST00000409586 2021 ntAPPRIS ALT2 TSL 2 BASIC18.47■□□□□ 0.55
TRAV12-2A0A075B6T6 MRAP2-201ENST00000257776 2153 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
TRAV12-2A0A075B6T6 BCAP31-201ENST00000345046 1589 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
TRAV12-2A0A075B6T6 C14orf80-203ENST00000354560 1553 ntAPPRIS ALT2 TSL 1 (best) BASIC18.47■□□□□ 0.55
TRAV12-2A0A075B6T6 NAPA-201ENST00000263354 1839 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
TRAV12-2A0A075B6T6 BBC3-204ENST00000449228 1827 ntTSL 1 (best) BASIC18.46■□□□□ 0.55
TRAV12-2A0A075B6T6 HSPB11-201ENST00000194214 915 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
TRAV12-2A0A075B6T6 TMEM147-202ENST00000392204 935 ntTSL 2 BASIC18.46■□□□□ 0.55
TRAV12-2A0A075B6T6 ANKRD16-201ENST00000191063 1567 ntTSL 3 BASIC18.46■□□□□ 0.55
TRAV12-2A0A075B6T6 MPST-206ENST00000429360 1331 ntTSL 1 (best) BASIC18.46■□□□□ 0.55
TRAV12-2A0A075B6T6 TSPAN3-203ENST00000424443 1530 ntTSL 2 BASIC18.45■□□□□ 0.54
TRAV12-2A0A075B6T6 FAM107B-205ENST00000378467 2374 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
TRAV12-2A0A075B6T6 CACNG7-203ENST00000391767 2688 ntAPPRIS P1 TSL 5 BASIC18.45■□□□□ 0.54
TRAV12-2A0A075B6T6 U2AF1-203ENST00000398137 1019 ntTSL 1 (best) BASIC18.45■□□□□ 0.54
TRAV12-2A0A075B6T6 PEX7-203ENST00000541292 945 ntTSL 5 BASIC18.45■□□□□ 0.54
TRAV12-2A0A075B6T6 CHML-204ENST00000638121 920 ntTSL 2 BASIC18.45■□□□□ 0.54
TRAV12-2A0A075B6T6 U2AF1L5-212ENST00000639996 1019 ntTSL 1 (best) BASIC18.45■□□□□ 0.54
TRAV12-2A0A075B6T6 TAZ-201ENST00000369776 1596 ntTSL 1 (best) BASIC18.45■□□□□ 0.54
TRAV12-2A0A075B6T6 NELFB-202ENST00000634710 1887 ntAPPRIS P2 TSL 1 (best) BASIC18.45■□□□□ 0.54
TRAV12-2A0A075B6T6 AC009690.3-201ENST00000569547 1902 ntAPPRIS P1 TSL 2 BASIC18.45■□□□□ 0.54
TRAV12-2A0A075B6T6 ZNF276-202ENST00000443381 2267 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
TRAV12-2A0A075B6T6 TMEM55B-202ENST00000398020 1696 ntAPPRIS ALT1 TSL 1 (best) BASIC18.44■□□□□ 0.54
TRAV12-2A0A075B6T6 TGFBRAP1-202ENST00000393359 5979 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
TRAV12-2A0A075B6T6 DCUN1D5-201ENST00000260247 1337 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
TRAV12-2A0A075B6T6 NKPD1-202ENST00000589776 1950 ntAPPRIS P1 BASIC18.43■□□□□ 0.54
TRAV12-2A0A075B6T6 NXPH3-201ENST00000328741 2179 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
TRAV12-2A0A075B6T6 ARHGDIG-201ENST00000219409 949 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
TRAV12-2A0A075B6T6 ZNRF2P2-203ENST00000454624 420 ntBASIC18.43■□□□□ 0.54
TRAV12-2A0A075B6T6 FKBP1A-210ENST00000614856 562 ntTSL 2 BASIC18.43■□□□□ 0.54
TRAV12-2A0A075B6T6 NR6A1-203ENST00000416460 1898 ntAPPRIS ALT2 TSL 1 (best) BASIC18.43■□□□□ 0.54
TRAV12-2A0A075B6T6 AKAP8L-208ENST00000595465 1933 ntTSL 2 BASIC18.43■□□□□ 0.54
Retrieved 100 of 98,524 protein–RNA pairs in 20.7 ms