RNA–Protein interactions for RNA: tC(GCA)G

tC(GCA)G, Transcript of Cysteine tRNA (tRNA-Cys), predicted by tRNAscan-SE analysis, yeastyeast

Gene tC(GCA)G, Length 72 nt, Biotype tRNA.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
tC(GCA)GtC(GCA)G INO80P53115 1489 aa8.64□□□□□ -1.03
tC(GCA)GtC(GCA)G MON2P48563 1636 aaPredicted RBP8.62□□□□□ -1.03
tC(GCA)GtC(GCA)G RSE1Q04693 1361 aaKnown RBP8.27□□□□□ -1.09
tC(GCA)GtC(GCA)G DNA2P38859 1522 aa8.25□□□□□ -1.09
tC(GCA)GtC(GCA)G SWR1Q05471 1514 aa7.98□□□□□ -1.13
tC(GCA)GtC(GCA)G KOG1P38873 1557 aa7.97□□□□□ -1.13
tC(GCA)GtC(GCA)G SPA2P23201 1466 aaKnown RBP7.77□□□□□ -1.17
tC(GCA)GtC(GCA)G MTC1P47018 478 aaKnown RBP7.69□□□□□ -1.18
tC(GCA)GtC(GCA)G TY1B-DR4Q07793 1604 aa7.62□□□□□ -1.19
tC(GCA)GtC(GCA)G TCB3Q03640 1545 aaKnown RBP7.5□□□□□ -1.21
tC(GCA)GtC(GCA)G MIF2P35201 549 aa7.38□□□□□ -1.23
tC(GCA)GtC(GCA)G ECM5Q03214 1411 aa7.36□□□□□ -1.23
tC(GCA)GtC(GCA)G SPT6P23615 1451 aaKnown RBP7.23□□□□□ -1.25
tC(GCA)GtC(GCA)G HSL1P34244 1518 aa7.22□□□□□ -1.25
tC(GCA)GtC(GCA)G REV3P14284 1504 aa7.21□□□□□ -1.26
tC(GCA)GtC(GCA)G MDS3P53094 1487 aa7.19□□□□□ -1.26
tC(GCA)GtC(GCA)G BUD4P47136 1447 aa7.18□□□□□ -1.26
tC(GCA)GtC(GCA)G YFR006WP43590 535 aa7.14□□□□□ -1.27
tC(GCA)GtC(GCA)G THO2P53552 1597 aaKnown RBP7.13□□□□□ -1.27
tC(GCA)GtC(GCA)G BPT1P14772 1559 aa7.05□□□□□ -1.28
tC(GCA)GtC(GCA)G HIR3P47171 1648 aa7.05□□□□□ -1.28
tC(GCA)GtC(GCA)G PEP1P32319 1579 aa7.03□□□□□ -1.28
tC(GCA)GtC(GCA)G SGS1P35187 1447 aa7.02□□□□□ -1.29
tC(GCA)GtC(GCA)G ABP1P15891 592 aaKnown RBP6.9□□□□□ -1.3
tC(GCA)GtC(GCA)G YCF1P39109 1515 aaKnown RBP6.9□□□□□ -1.31
tC(GCA)GtC(GCA)G ATG2P53855 1592 aa6.88□□□□□ -1.31
tC(GCA)GtC(GCA)G TAF2P23255 1407 aa6.88□□□□□ -1.31
tC(GCA)GtC(GCA)G BNI1P41832 1953 aa6.86□□□□□ -1.31
tC(GCA)GtC(GCA)G XRN1P22147 1528 aaKnown RBP6.83□□□□□ -1.32
tC(GCA)GtC(GCA)G MYO2P19524 1574 aaKnown RBP6.79□□□□□ -1.32
tC(GCA)GtC(GCA)G ITT1Q04638 464 aa6.78□□□□□ -1.32
tC(GCA)GtC(GCA)G CDC25P04821 1589 aa6.76□□□□□ -1.33
tC(GCA)GtC(GCA)G LTE1P07866 1435 aa6.75□□□□□ -1.33
tC(GCA)GtC(GCA)G RPA190P10964 1664 aaKnown RBP6.74□□□□□ -1.33
tC(GCA)GtC(GCA)G SSK2P53599 1579 aa6.73□□□□□ -1.33
tC(GCA)GtC(GCA)G SKI3P17883 1432 aaKnown RBP6.72□□□□□ -1.33
tC(GCA)GtC(GCA)G MET5P47169 1442 aa6.7□□□□□ -1.34
tC(GCA)GtC(GCA)G DNF1P32660 1571 aa6.69□□□□□ -1.34
tC(GCA)GtC(GCA)G MMS1Q06211 1407 aa6.68□□□□□ -1.34
tC(GCA)GtC(GCA)G IRC20Q06554 1556 aa6.68□□□□□ -1.34
tC(GCA)GtC(GCA)G ESC1Q03661 1658 aaKnown RBP6.65□□□□□ -1.34
tC(GCA)GtC(GCA)G GEA2P39993 1459 aaKnown RBP6.63□□□□□ -1.35
tC(GCA)GtC(GCA)G UFD4P33202 1483 aa6.62□□□□□ -1.35
tC(GCA)GtC(GCA)G RPO31P04051 1460 aa6.61□□□□□ -1.35
tC(GCA)GtC(GCA)G RKR1Q04781 1562 aa6.58□□□□□ -1.36
tC(GCA)GtC(GCA)G RQC2Q12532 1038 aaKnown RBP6.57□□□□□ -1.36
tC(GCA)GtC(GCA)G CHD1P32657 1468 aa6.56□□□□□ -1.36
tC(GCA)GtC(GCA)G TY1B-BRQ12193 1756 aa6.51□□□□□ -1.37
tC(GCA)GtC(GCA)G TY1B-GR3Q12316 1755 aa6.51□□□□□ -1.37
tC(GCA)GtC(GCA)G TY1B-ORQ92393 1755 aa6.51□□□□□ -1.37
tC(GCA)GtC(GCA)G DNF2Q12675 1612 aa6.5□□□□□ -1.37
tC(GCA)GtC(GCA)G DRS2P39524 1355 aa6.48□□□□□ -1.37
tC(GCA)GtC(GCA)G PAN1P32521 1480 aa6.46□□□□□ -1.38
tC(GCA)GtC(GCA)G SIN3P22579 1536 aa6.45□□□□□ -1.38
tC(GCA)GtC(GCA)G TY2B-LR1P0C2J3 1770 aa6.45□□□□□ -1.38
tC(GCA)GtC(GCA)G TY2B-FP0CX63 1770 aa6.45□□□□□ -1.38
tC(GCA)GtC(GCA)G TY2B-GR2P0CX64 1770 aa6.45□□□□□ -1.38
tC(GCA)GtC(GCA)G TY2B-CP25384 1770 aa6.45□□□□□ -1.38
tC(GCA)GtC(GCA)G TY2B-DR2Q03494 1770 aa6.45□□□□□ -1.38
tC(GCA)GtC(GCA)G TY1B-DR1Q03855 1755 aa6.45□□□□□ -1.38
tC(GCA)GtC(GCA)G TY2B-DR3Q07791 1770 aaKnown RBP6.45□□□□□ -1.38
tC(GCA)GtC(GCA)G TY2B-OR1Q12113 1770 aa6.45□□□□□ -1.38
tC(GCA)GtC(GCA)G TY2B-DR1Q12472 1770 aa6.45□□□□□ -1.38
tC(GCA)GtC(GCA)G TY2B-OR2Q12501 1770 aa6.45□□□□□ -1.38
tC(GCA)GtC(GCA)G ESP1Q03018 1630 aa6.44□□□□□ -1.38
tC(GCA)GtC(GCA)G SCC2Q04002 1493 aa6.44□□□□□ -1.38
tC(GCA)GtC(GCA)G YRF1-1P0CX20 1796 aa6.44□□□□□ -1.38
tC(GCA)GtC(GCA)G YRF1-5P0CX21 1796 aa6.44□□□□□ -1.38
tC(GCA)GtC(GCA)G YRF1-8P0CX22 1796 aa6.44□□□□□ -1.38
tC(GCA)GtC(GCA)G YOR093CQ12275 1648 aa6.43□□□□□ -1.38
tC(GCA)GtC(GCA)G YPK9Q12697 1472 aa6.41□□□□□ -1.38
tC(GCA)GtC(GCA)G VPS15P22219 1454 aa6.37□□□□□ -1.39
tC(GCA)GtC(GCA)G TY1B-HO13535 1793 aa6.36□□□□□ -1.39
tC(GCA)GtC(GCA)G TY1B-DR5P0C2I2 1755 aa6.36□□□□□ -1.39
tC(GCA)GtC(GCA)G TY1B-DR6P0C2I3 1755 aa6.36□□□□□ -1.39
tC(GCA)GtC(GCA)G TY1B-LR2P0C2I5 1755 aa6.36□□□□□ -1.39
tC(GCA)GtC(GCA)G TY1B-LR3P0C2I6 1755 aaKnown RBP6.36□□□□□ -1.39
tC(GCA)GtC(GCA)G TY1B-PR1P0C2I9 1755 aaKnown RBP6.36□□□□□ -1.39
tC(GCA)GtC(GCA)G TY1B-PR2P0C2J0 1756 aa6.36□□□□□ -1.39
tC(GCA)GtC(GCA)G TY1B-PR3P0C2J1 1755 aaKnown RBP6.36□□□□□ -1.39
tC(GCA)GtC(GCA)G TY1B-JR1P47098 1755 aa6.36□□□□□ -1.39
tC(GCA)GtC(GCA)G TY1B-ML2Q03434 1755 aaKnown RBP6.36□□□□□ -1.39
tC(GCA)GtC(GCA)G TY1B-ER1Q03612 1755 aa6.36□□□□□ -1.39
tC(GCA)GtC(GCA)G TY1B-ML1Q04711 1755 aaKnown RBP6.36□□□□□ -1.39
tC(GCA)GtC(GCA)G TY1B-GR2Q12269 1755 aa6.36□□□□□ -1.39
tC(GCA)GtC(GCA)G TY1B-OLQ12273 1755 aa6.36□□□□□ -1.39
tC(GCA)GtC(GCA)G TY1B-PLQ12414 1755 aaKnown RBP6.36□□□□□ -1.39
tC(GCA)GtC(GCA)G TY2B-BQ12491 1770 aa6.34□□□□□ -1.39
tC(GCA)GtC(GCA)G TRM732Q03496 1420 aa6.33□□□□□ -1.4
tC(GCA)GtC(GCA)G NUP159P40477 1460 aa6.31□□□□□ -1.4
tC(GCA)GtC(GCA)G MMS22Q06164 1454 aa6.28□□□□□ -1.4
tC(GCA)GtC(GCA)G TY1B-DR3Q99231 1755 aa6.27□□□□□ -1.41
tC(GCA)GtC(GCA)G DOP1Q03921 1698 aa6.26□□□□□ -1.41
tC(GCA)GtC(GCA)G NTE1Q04958 1679 aa6.26□□□□□ -1.41
tC(GCA)GtC(GCA)G NUP170P38181 1502 aa6.22□□□□□ -1.41
tC(GCA)GtC(GCA)G TY1B-JR2P47100 1755 aaKnown RBP6.2□□□□□ -1.42
tC(GCA)GtC(GCA)G TY1B-ER2Q03619 1755 aa6.2□□□□□ -1.42
tC(GCA)GtC(GCA)G TY1B-MR1Q04214 1755 aa6.2□□□□□ -1.42
tC(GCA)GtC(GCA)G TY1B-MR2Q04670 1755 aaKnown RBP6.2□□□□□ -1.42
tC(GCA)GtC(GCA)G TY1B-LR1Q12088 1755 aaKnown RBP6.2□□□□□ -1.42
Retrieved 100 of 5,963 RNA–protein pairs in 153.2 ms