RNA–Protein interactions for RNA: YJR126C

VPS70, Transcript of Protein of unknown function involved in vacuolar protein sorting, yeastyeast

Gene VPS70, Length 2,436 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
VPS70YJR126C MON2P48563 1636 aaPredicted RBP10.92□□□□□ -0.66
VPS70YJR126C INO80P53115 1489 aa10.82□□□□□ -0.68
VPS70YJR126C DNA2P38859 1522 aa10.3□□□□□ -0.76
VPS70YJR126C KOG1P38873 1557 aa10.21□□□□□ -0.78
VPS70YJR126C SWR1Q05471 1514 aa10.18□□□□□ -0.78
VPS70YJR126C RSE1Q04693 1361 aaKnown RBP10.12□□□□□ -0.79
VPS70YJR126C TCB3Q03640 1545 aaKnown RBP9.99□□□□□ -0.81
VPS70YJR126C TY1B-DR4Q07793 1604 aa9.95□□□□□ -0.82
VPS70YJR126C SPA2P23201 1466 aaKnown RBP9.67□□□□□ -0.86
VPS70YJR126C SGS1P35187 1447 aa9.48□□□□□ -0.89
VPS70YJR126C SPT6P23615 1451 aaKnown RBP9.48□□□□□ -0.89
VPS70YJR126C HSL1P34244 1518 aa9.48□□□□□ -0.89
VPS70YJR126C THO2P53552 1597 aaKnown RBP9.41□□□□□ -0.9
VPS70YJR126C MTC1P47018 478 aaKnown RBP9.41□□□□□ -0.9
VPS70YJR126C ECM5Q03214 1411 aa9.4□□□□□ -0.9
VPS70YJR126C BUD4P47136 1447 aa9.36□□□□□ -0.91
VPS70YJR126C MDS3P53094 1487 aa9.29□□□□□ -0.92
VPS70YJR126C REV3P14284 1504 aa9.25□□□□□ -0.93
VPS70YJR126C HIR3P47171 1648 aa9.24□□□□□ -0.93
VPS70YJR126C PEP1P32319 1579 aa9.14□□□□□ -0.95
VPS70YJR126C BPT1P14772 1559 aa9.09□□□□□ -0.95
VPS70YJR126C MIF2P35201 549 aa9.07□□□□□ -0.96
VPS70YJR126C ATG2P53855 1592 aa9□□□□□ -0.97
VPS70YJR126C XRN1P22147 1528 aaKnown RBP8.97□□□□□ -0.97
VPS70YJR126C YCF1P39109 1515 aaKnown RBP8.93□□□□□ -0.98
VPS70YJR126C SSK2P53599 1579 aa8.93□□□□□ -0.98
VPS70YJR126C SSN2P38931 1420 aa8.91□□□□□ -0.98
VPS70YJR126C MYO2P19524 1574 aaKnown RBP8.79□□□□□ -1
VPS70YJR126C MET5P47169 1442 aa8.79□□□□□ -1
VPS70YJR126C SIN3P22579 1536 aa8.77□□□□□ -1
VPS70YJR126C LTE1P07866 1435 aa8.77□□□□□ -1
VPS70YJR126C TAF2P23255 1407 aa8.75□□□□□ -1.01
VPS70YJR126C SKI3P17883 1432 aaKnown RBP8.72□□□□□ -1.01
VPS70YJR126C CDC25P04821 1589 aa8.67□□□□□ -1.02
VPS70YJR126C BFR2Q06631 534 aaKnown RBP8.65□□□□□ -1.02
VPS70YJR126C YFR006WP43590 535 aa8.65□□□□□ -1.02
VPS70YJR126C RPA190P10964 1664 aaKnown RBP8.64□□□□□ -1.03
VPS70YJR126C UFD4P33202 1483 aa8.64□□□□□ -1.03
VPS70YJR126C BNI1P41832 1953 aa8.62□□□□□ -1.03
VPS70YJR126C DRS1P32892 752 aaKnown RBP8.61□□□□□ -1.03
VPS70YJR126C ESC1Q03661 1658 aaKnown RBP8.6□□□□□ -1.03
VPS70YJR126C GEA2P39993 1459 aaKnown RBP8.6□□□□□ -1.03
VPS70YJR126C RKR1Q04781 1562 aa8.6□□□□□ -1.03
VPS70YJR126C ESP1Q03018 1630 aa8.6□□□□□ -1.03
VPS70YJR126C CHD1P32657 1468 aa8.59□□□□□ -1.03
VPS70YJR126C DNF1P32660 1571 aa8.57□□□□□ -1.04
VPS70YJR126C SCC2Q04002 1493 aa8.54□□□□□ -1.04
VPS70YJR126C YPK9Q12697 1472 aa8.54□□□□□ -1.04
VPS70YJR126C ABP1P15891 592 aaKnown RBP8.54□□□□□ -1.04
VPS70YJR126C RPO31P04051 1460 aa8.51□□□□□ -1.05
VPS70YJR126C PAN1P32521 1480 aa8.5□□□□□ -1.05
VPS70YJR126C IRC20Q06554 1556 aa8.48□□□□□ -1.05
VPS70YJR126C MMS1Q06211 1407 aa8.48□□□□□ -1.05
VPS70YJR126C ITT1Q04638 464 aa8.47□□□□□ -1.05
VPS70YJR126C TY1B-BRQ12193 1756 aa8.46□□□□□ -1.05
VPS70YJR126C TY1B-GR3Q12316 1755 aa8.46□□□□□ -1.05
VPS70YJR126C TY1B-ORQ92393 1755 aa8.46□□□□□ -1.05
VPS70YJR126C TY2B-LR1P0C2J3 1770 aa8.42□□□□□ -1.06
VPS70YJR126C TY2B-FP0CX63 1770 aa8.42□□□□□ -1.06
VPS70YJR126C TY2B-GR2P0CX64 1770 aa8.42□□□□□ -1.06
VPS70YJR126C TY2B-CP25384 1770 aa8.42□□□□□ -1.06
VPS70YJR126C TY2B-DR2Q03494 1770 aa8.42□□□□□ -1.06
VPS70YJR126C TY1B-DR1Q03855 1755 aa8.42□□□□□ -1.06
VPS70YJR126C TY2B-DR3Q07791 1770 aaKnown RBP8.42□□□□□ -1.06
VPS70YJR126C TY2B-OR1Q12113 1770 aa8.42□□□□□ -1.06
VPS70YJR126C TY2B-DR1Q12472 1770 aa8.42□□□□□ -1.06
VPS70YJR126C TY2B-OR2Q12501 1770 aa8.42□□□□□ -1.06
VPS70YJR126C DRS2P39524 1355 aa8.4□□□□□ -1.06
VPS70YJR126C NOP2P40991 618 aaKnown RBP8.4□□□□□ -1.07
VPS70YJR126C TRM732Q03496 1420 aa8.34□□□□□ -1.07
VPS70YJR126C TY1B-HO13535 1793 aa8.34□□□□□ -1.08
VPS70YJR126C TY1B-DR5P0C2I2 1755 aa8.34□□□□□ -1.08
VPS70YJR126C TY1B-DR6P0C2I3 1755 aa8.34□□□□□ -1.08
VPS70YJR126C TY1B-LR2P0C2I5 1755 aa8.34□□□□□ -1.08
VPS70YJR126C TY1B-LR3P0C2I6 1755 aaKnown RBP8.34□□□□□ -1.08
VPS70YJR126C TY1B-PR1P0C2I9 1755 aaKnown RBP8.34□□□□□ -1.08
VPS70YJR126C TY1B-PR2P0C2J0 1756 aa8.34□□□□□ -1.08
VPS70YJR126C TY1B-PR3P0C2J1 1755 aaKnown RBP8.34□□□□□ -1.08
VPS70YJR126C TY1B-JR1P47098 1755 aa8.34□□□□□ -1.08
VPS70YJR126C TY1B-ML2Q03434 1755 aaKnown RBP8.34□□□□□ -1.08
VPS70YJR126C TY1B-ER1Q03612 1755 aa8.34□□□□□ -1.08
VPS70YJR126C TY1B-ML1Q04711 1755 aaKnown RBP8.34□□□□□ -1.08
VPS70YJR126C TY1B-GR2Q12269 1755 aa8.34□□□□□ -1.08
VPS70YJR126C TY1B-OLQ12273 1755 aa8.34□□□□□ -1.08
VPS70YJR126C TY1B-PLQ12414 1755 aaKnown RBP8.34□□□□□ -1.08
VPS70YJR126C TOP2P06786 1428 aaKnown RBP8.32□□□□□ -1.08
VPS70YJR126C RQC2Q12532 1038 aaKnown RBP8.32□□□□□ -1.08
VPS70YJR126C MMS22Q06164 1454 aa8.32□□□□□ -1.08
VPS70YJR126C DNF2Q12675 1612 aa8.32□□□□□ -1.08
VPS70YJR126C VPS15P22219 1454 aa8.31□□□□□ -1.08
VPS70YJR126C TY2B-BQ12491 1770 aa8.3□□□□□ -1.08
VPS70YJR126C YRF1-1P0CX20 1796 aa8.28□□□□□ -1.08
VPS70YJR126C YRF1-5P0CX21 1796 aa8.28□□□□□ -1.08
VPS70YJR126C YRF1-8P0CX22 1796 aa8.28□□□□□ -1.08
VPS70YJR126C NUP159P40477 1460 aa8.27□□□□□ -1.09
VPS70YJR126C NSR1P27476 414 aaKnown RBP RIP-Chip data8.26□□□□□ -1.09not detected
VPS70YJR126C TY1B-DR3Q99231 1755 aa8.24□□□□□ -1.09
VPS70YJR126C YOR093CQ12275 1648 aa8.23□□□□□ -1.09
VPS70YJR126C POL1P13382 1468 aa8.22□□□□□ -1.09
VPS70YJR126C NTE1Q04958 1679 aa8.2□□□□□ -1.1
Retrieved 100 of 5,963 RNA–protein pairs in 15.1 ms