RNA–Protein interactions for RNA: ENST00000640735.1

PAX6-277, Transcript of paired box 6, humanhuman

TSL 5

Gene PAX6, Length 2,060 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PAX6-277ENST00000640735 NISCHQ9Y2I1 1504 aa32.55■■■□□ 2.8
PAX6-277ENST00000640735 CCDC180Q9P1Z9 1646 aa28.76■■■□□ 2.2
PAX6-277ENST00000640735 ABCC9O60706 1549 aa27.75■■■□□ 2.03
PAX6-277ENST00000640735 CHIC1Q5VXU3 224 aa27.6■■■□□ 2.01
PAX6-277ENST00000640735 ZCCHC6Q5VYS8 1495 aaKnown RBP27.21■■□□□ 1.95
PAX6-277ENST00000640735 SLC24A1O60721 1099 aa27.09■■□□□ 1.93
PAX6-277ENST00000640735 DCAF8L2P0C7V8 631 aa27.04■■□□□ 1.92
PAX6-277ENST00000640735 DCAF1Q9Y4B6 1507 aa26.93■■□□□ 1.9
PAX6-277ENST00000640735 NACADO15069 1562 aa26.92■■□□□ 1.9
PAX6-277ENST00000640735 MYO15BQ96JP2 1530 aa26.87■■□□□ 1.89
PAX6-277ENST00000640735 RB1CC1Q8TDY2 1594 aa26.86■■□□□ 1.89
PAX6-277ENST00000640735 SHROOM4Q9ULL8 1493 aa26.63■■□□□ 1.85
PAX6-277ENST00000640735 SCRIBQ14160 1630 aa26.31■■□□□ 1.8
PAX6-277ENST00000640735 UNC13AQ9UPW8 1703 aa26.29■■□□□ 1.8
PAX6-277ENST00000640735 SUPT5HO00267 1087 aaKnown RBP26.09■■□□□ 1.77
PAX6-277ENST00000640735 BICRAQ9NZM4 1560 aa26.04■■□□□ 1.76
PAX6-277ENST00000640735 PABPN1Q86U42 306 aaKnown RBP eCLIP25.99■■□□□ 1.75
PAX6-277ENST00000640735 EHMT2Q96KQ7 1210 aa25.93■■□□□ 1.74
PAX6-277ENST00000640735 AEBP2Q6ZN18 517 aaPredicted RBP25.86■■□□□ 1.73
PAX6-277ENST00000640735 CECR2Q9BXF3 1484 aa25.32■■□□□ 1.64
PAX6-277ENST00000640735 EIF4G1Q04637 1599 aaKnown RBP25.32■■□□□ 1.64
PAX6-277ENST00000640735 BAZ1AQ9NRL2 1556 aaPredicted RBP25.2■■□□□ 1.63
PAX6-277ENST00000640735 SMARCA4P51532 1647 aa25.19■■□□□ 1.62
PAX6-277ENST00000640735 CC2D2AQ9P2K1 1620 aa25.12■■□□□ 1.61
PAX6-277ENST00000640735 MROH2BQ7Z745 1585 aa25.1■■□□□ 1.61
PAX6-277ENST00000640735 RSF1Q96T23 1441 aaPredicted RBP25.09■■□□□ 1.61
PAX6-277ENST00000640735 DNAJC5BQ9UF47 199 aa25.05■■□□□ 1.6
PAX6-277ENST00000640735 PLPPR3Q6T4P5 718 aa24.92■■□□□ 1.58
PAX6-277ENST00000640735 ATAD2BQ9ULI0 1458 aa24.92■■□□□ 1.58
PAX6-277ENST00000640735 SMARCA2P51531 1590 aa24.92■■□□□ 1.58
PAX6-277ENST00000640735 PEG3Q9GZU2 1588 aa24.91■■□□□ 1.58
PAX6-277ENST00000640735 WIZO95785 1651 aa24.88■■□□□ 1.57
PAX6-277ENST00000640735 NCAPD3P42695 1498 aa24.82■■□□□ 1.56
PAX6-277ENST00000640735 PHF23Q9BUL5 403 aaPredicted RBP24.82■■□□□ 1.56
PAX6-277ENST00000640735 HMGXB3Q12766 1538 aa24.76■■□□□ 1.55
PAX6-277ENST00000640735 BAZ1BQ9UIG0 1483 aaKnown RBP24.76■■□□□ 1.55
PAX6-277ENST00000640735 RTN4Q9NQC3 1192 aaKnown RBP24.74■■□□□ 1.55
PAX6-277ENST00000640735 TOP2AP11388 1531 aaKnown RBP24.62■■□□□ 1.53
PAX6-277ENST00000640735 LOC105371045A0A1W2PR82 267 aa24.6■■□□□ 1.53
PAX6-277ENST00000640735 HRCP23327 699 aa24.54■■□□□ 1.52
PAX6-277ENST00000640735 TRIM41Q8WV44 630 aa24.45■■□□□ 1.5
PAX6-277ENST00000640735 PCGF6Q9BYE7 350 aa24.42■■□□□ 1.5
PAX6-277ENST00000640735 CCDC88BA6NC98 1476 aa24.33■■□□□ 1.48
PAX6-277ENST00000640735 AMER1Q5JTC6 1135 aaPredicted RBP24.31■■□□□ 1.48
PAX6-277ENST00000640735 CSRNP3Q8WYN3 585 aa24.22■■□□□ 1.47
PAX6-277ENST00000640735 NCBP3Q53F19 620 aaKnown RBP24.2■■□□□ 1.47
PAX6-277ENST00000640735 TRIM26Q12899 539 aaPredicted RBP24.19■■□□□ 1.46
PAX6-277ENST00000640735 DAXXQ9UER7 740 aaPredicted RBP24.19■■□□□ 1.46
PAX6-277ENST00000640735 NESP48681 1621 aa24.14■■□□□ 1.45
PAX6-277ENST00000640735 KCNA4P22459 653 aa24.14■■□□□ 1.45
PAX6-277ENST00000640735 CADPSQ9ULU8 1353 aa24.13■■□□□ 1.45
PAX6-277ENST00000640735 LAMC3Q9Y6N6 1575 aa24.12■■□□□ 1.45
PAX6-277ENST00000640735 CFTRP13569 1480 aa24.08■■□□□ 1.44
PAX6-277ENST00000640735 FAM9AQ8IZU1 332 aaPredicted RBP24.04■■□□□ 1.44
PAX6-277ENST00000640735 PRDM2Q13029 1718 aa23.98■■□□□ 1.43
PAX6-277ENST00000640735 PDS5BQ9NTI5 1447 aa23.93■■□□□ 1.42
PAX6-277ENST00000640735 KIF21AQ7Z4S6 1674 aa23.89■■□□□ 1.41
PAX6-277ENST00000640735 ERCC6Q03468 1493 aa23.88■■□□□ 1.41
PAX6-277ENST00000640735 FANCD2Q9BXW9 1451 aa23.87■■□□□ 1.41
PAX6-277ENST00000640735 ABCC8Q09428 1581 aa23.83■■□□□ 1.4
PAX6-277ENST00000640735 PPARGC1BQ86YN6 1023 aaKnown RBP23.82■■□□□ 1.4
PAX6-277ENST00000640735 CEP164Q9UPV0 1460 aa23.81■■□□□ 1.4
PAX6-277ENST00000640735 ZEB1P37275 1124 aaPredicted RBP23.71■■□□□ 1.39
PAX6-277ENST00000640735 EEA1Q15075 1411 aa23.7■■□□□ 1.38
PAX6-277ENST00000640735 THOC2Q8NI27 1593 aaKnown RBP23.69■■□□□ 1.38
PAX6-277ENST00000640735 MRC2Q9UBG0 1479 aa23.68■■□□□ 1.38
PAX6-277ENST00000640735 URB2Q14146 1524 aaKnown RBP23.61■■□□□ 1.37
PAX6-277ENST00000640735 SOGA1O94964 1423 aa23.6■■□□□ 1.37
PAX6-277ENST00000640735 WRNQ14191 1432 aaPredicted RBP eCLIP23.59■■□□□ 1.37
PAX6-277ENST00000640735 WDR62O43379 1518 aa23.59■■□□□ 1.37
PAX6-277ENST00000640735 TNIKQ9UKE5 1360 aa23.57■■□□□ 1.36
PAX6-277ENST00000640735 DNMBPQ6XZF7 1577 aa23.56■■□□□ 1.36
PAX6-277ENST00000640735 TOPBP1Q92547 1522 aa23.54■■□□□ 1.36
PAX6-277ENST00000640735 CUX1P39880 1505 aa23.53■■□□□ 1.36
PAX6-277ENST00000640735 PRKCSHP14314 528 aaPredicted RBP23.48■■□□□ 1.35
PAX6-277ENST00000640735 CEP162Q5TB80 1403 aa23.48■■□□□ 1.35
PAX6-277ENST00000640735 SYNJ1O43426 1573 aa23.48■■□□□ 1.35
PAX6-277ENST00000640735 RUSC2Q8N2Y8 1516 aa23.48■■□□□ 1.35
PAX6-277ENST00000640735 BIVM-ERCC5R4GMW8 1640 aa23.45■■□□□ 1.34
PAX6-277ENST00000640735 TOP2BQ02880 1626 aa23.44■■□□□ 1.34
PAX6-277ENST00000640735 CUX2O14529 1486 aa23.44■■□□□ 1.34
PAX6-277ENST00000640735 GOLGA3Q08378 1498 aa23.42■■□□□ 1.34
PAX6-277ENST00000640735 FGD5Q6ZNL6 1462 aa23.39■■□□□ 1.33
PAX6-277ENST00000640735 POLA1P09884 1462 aaPredicted RBP23.37■■□□□ 1.33
PAX6-277ENST00000640735 KIF21BO75037 1637 aa23.35■■□□□ 1.33
PAX6-277ENST00000640735 IFT140Q96RY7 1462 aa23.27■■□□□ 1.32
PAX6-277ENST00000640735 RAD54L2Q9Y4B4 1467 aa23.27■■□□□ 1.32
PAX6-277ENST00000640735 TARBP1Q13395 1621 aaKnown RBP23.26■■□□□ 1.31
PAX6-277ENST00000640735 UBTFP17480 764 aaKnown RBP23.25■■□□□ 1.31
PAX6-277ENST00000640735 WDR97A6NE52 1622 aa23.19■■□□□ 1.3
PAX6-277ENST00000640735 SLC4A1APQ9BWU0 796 aaKnown RBP23.17■■□□□ 1.3
PAX6-277ENST00000640735 ABCA10Q8WWZ4 1543 aa23.16■■□□□ 1.3
PAX6-277ENST00000640735 ZNF608Q9ULD9 1512 aaPredicted RBP23.15■■□□□ 1.3
PAX6-277ENST00000640735 EIF4G3O43432 1585 aaKnown RBP23.1■■□□□ 1.29
PAX6-277ENST00000640735 TDRD9Q8NDG6 1382 aaKnown RBP23.09■■□□□ 1.29
PAX6-277ENST00000640735 CLIP1P30622 1438 aa23.08■■□□□ 1.29
PAX6-277ENST00000640735 ARXQ96QS3 562 aa23.07■■□□□ 1.28
PAX6-277ENST00000640735 AQRO60306 1485 aaKnown RBP eCLIP23.07■■□□□ 1.28
PAX6-277ENST00000640735 RAPGEF2Q9Y4G8 1499 aa23.07■■□□□ 1.28
PAX6-277ENST00000640735 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP23.06■■□□□ 1.28
Retrieved 100 of 20,778 RNA–protein pairs in 76.8 ms