RNA–Protein interactions for RNA: ENST00000639816.1

STRADA-240, Transcript of STE20-related kinase adaptor alpha, humanhuman

TSL 5

Gene STRADA, Length 588 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
STRADA-240ENST00000639816 CHIC1Q5VXU3 224 aa18.03■□□□□ 0.48
STRADA-240ENST00000639816 AEBP2Q6ZN18 517 aaPredicted RBP17.56■□□□□ 0.4
STRADA-240ENST00000639816 PHF23Q9BUL5 403 aaPredicted RBP16■□□□□ 0.15
STRADA-240ENST00000639816 NISCHQ9Y2I1 1504 aa15.9■□□□□ 0.14
STRADA-240ENST00000639816 PLPPR3Q6T4P5 718 aa15.06■□□□□ 0
STRADA-240ENST00000639816 ABCC9O60706 1549 aa14.87□□□□□ -0.03
STRADA-240ENST00000639816 SENP3Q9H4L4 574 aaPredicted RBP14.68□□□□□ -0.06
STRADA-240ENST00000639816 CCDC180Q9P1Z9 1646 aa14.63□□□□□ -0.07
STRADA-240ENST00000639816 EHMT2Q96KQ7 1210 aa14.53□□□□□ -0.08
STRADA-240ENST00000639816 KCNA4P22459 653 aa14.25□□□□□ -0.13
STRADA-240ENST00000639816 DNAJC5BQ9UF47 199 aa14.2□□□□□ -0.14
STRADA-240ENST00000639816 ADRA2BP18089 450 aa14.16□□□□□ -0.14
STRADA-240ENST00000639816 RB1CC1Q8TDY2 1594 aa14.09□□□□□ -0.15
STRADA-240ENST00000639816 NACADO15069 1562 aa13.87□□□□□ -0.19
STRADA-240ENST00000639816 CSRNP3Q8WYN3 585 aa13.82□□□□□ -0.2
STRADA-240ENST00000639816 PPP6R1Q9UPN7 881 aa13.81□□□□□ -0.2
STRADA-240ENST00000639816 UNC13AQ9UPW8 1703 aa13.78□□□□□ -0.2
STRADA-240ENST00000639816 SLC4A1APQ9BWU0 796 aaKnown RBP13.72□□□□□ -0.21
STRADA-240ENST00000639816 PABPN1Q86U42 306 aaKnown RBP eCLIP13.67□□□□□ -0.22
STRADA-240ENST00000639816 BICRAQ9NZM4 1560 aa13.6□□□□□ -0.23
STRADA-240ENST00000639816 FOXD1Q16676 465 aa13.56□□□□□ -0.24
STRADA-240ENST00000639816 MYO15BQ96JP2 1530 aa13.54□□□□□ -0.24
STRADA-240ENST00000639816 SHROOM4Q9ULL8 1493 aa13.53□□□□□ -0.24
STRADA-240ENST00000639816 DCAF8L2P0C7V8 631 aa13.49□□□□□ -0.25
STRADA-240ENST00000639816 CC2D2AQ9P2K1 1620 aa13.49□□□□□ -0.25
STRADA-240ENST00000639816 CECR2Q9BXF3 1484 aa13.48□□□□□ -0.25
STRADA-240ENST00000639816 DNAJC5Q9H3Z4 198 aa13.48□□□□□ -0.25
STRADA-240ENST00000639816 PPP4R3CPQ6ZMV5 832 aa13.42□□□□□ -0.26
STRADA-240ENST00000639816 SLC24A1O60721 1099 aa13.38□□□□□ -0.27
STRADA-240ENST00000639816 EIF4G1Q04637 1599 aaKnown RBP13.35□□□□□ -0.27
STRADA-240ENST00000639816 NCBP3Q53F19 620 aaKnown RBP13.31□□□□□ -0.28
STRADA-240ENST00000639816 DCAF1Q9Y4B6 1507 aa13.18□□□□□ -0.3
STRADA-240ENST00000639816 SCRIBQ14160 1630 aa13.17□□□□□ -0.3
STRADA-240ENST00000639816 NPM3O75607 178 aaKnown RBP13.17□□□□□ -0.3
STRADA-240ENST00000639816 ZBTB22O15209 634 aa13.15□□□□□ -0.3
STRADA-240ENST00000639816 CUX2O14529 1486 aa13.12□□□□□ -0.31
STRADA-240ENST00000639816 ZCCHC6Q5VYS8 1495 aaKnown RBP13.1□□□□□ -0.31
STRADA-240ENST00000639816 RTN4Q9NQC3 1192 aaKnown RBP13.09□□□□□ -0.31
STRADA-240ENST00000639816 PIAS4Q8N2W9 510 aaPredicted RBP13.04□□□□□ -0.32
STRADA-240ENST00000639816 AMER1Q5JTC6 1135 aaPredicted RBP13.01□□□□□ -0.33
STRADA-240ENST00000639816 ERCC6Q03468 1493 aa12.96□□□□□ -0.34
STRADA-240ENST00000639816 CNKSR2Q8WXI2 1034 aa12.8□□□□□ -0.36
STRADA-240ENST00000639816 FOXD4L1Q9NU39 408 aa12.79□□□□□ -0.36
STRADA-240ENST00000639816 NCAPD3P42695 1498 aa12.73□□□□□ -0.37
STRADA-240ENST00000639816 THOC2Q8NI27 1593 aaKnown RBP12.71□□□□□ -0.37
STRADA-240ENST00000639816 TRIM41Q8WV44 630 aa12.69□□□□□ -0.38
STRADA-240ENST00000639816 HMGXB3Q12766 1538 aa12.68□□□□□ -0.38
STRADA-240ENST00000639816 SMARCA2P51531 1590 aa12.65□□□□□ -0.38
STRADA-240ENST00000639816 ATAD2BQ9ULI0 1458 aa12.62□□□□□ -0.39
STRADA-240ENST00000639816 NESP48681 1621 aa12.62□□□□□ -0.39
STRADA-240ENST00000639816 LAMC3Q9Y6N6 1575 aa12.61□□□□□ -0.39
STRADA-240ENST00000639816 SCAF1Q9H7N4 1312 aaKnown RBP12.59□□□□□ -0.39
STRADA-240ENST00000639816 KIF21AQ7Z4S6 1674 aa12.57□□□□□ -0.4
STRADA-240ENST00000639816 SMARCA4P51532 1647 aa12.55□□□□□ -0.4
STRADA-240ENST00000639816 BAZ1BQ9UIG0 1483 aaKnown RBP12.52□□□□□ -0.41
STRADA-240ENST00000639816 PDS5BQ9NTI5 1447 aa12.5□□□□□ -0.41
STRADA-240ENST00000639816 BAZ1AQ9NRL2 1556 aaPredicted RBP12.5□□□□□ -0.41
STRADA-240ENST00000639816 FKBP8Q14318 412 aa12.47□□□□□ -0.41
STRADA-240ENST00000639816 PEG3Q9GZU2 1588 aa12.45□□□□□ -0.42
STRADA-240ENST00000639816 WDR62O43379 1518 aa12.42□□□□□ -0.42
STRADA-240ENST00000639816 MRC2Q9UBG0 1479 aa12.42□□□□□ -0.42
STRADA-240ENST00000639816 OSCARQ8IYS5 282 aa12.33□□□□□ -0.44
STRADA-240ENST00000639816 MAPK8IP2Q13387 824 aaPredicted RBP12.31□□□□□ -0.44
STRADA-240ENST00000639816 CADPSQ9ULU8 1353 aa12.3□□□□□ -0.44
STRADA-240ENST00000639816 RIMBP3CA6NJZ7 1639 aa12.3□□□□□ -0.44
STRADA-240ENST00000639816 RIMBP3BA6NNM3 1639 aa12.3□□□□□ -0.44
STRADA-240ENST00000639816 RIMBP3Q9UFD9 1639 aa12.3□□□□□ -0.44
STRADA-240ENST00000639816 RNF216Q9NWF9 866 aaPredicted RBP12.3□□□□□ -0.44
STRADA-240ENST00000639816 CEP164Q9UPV0 1460 aa12.29□□□□□ -0.44
STRADA-240ENST00000639816 SLC4A2P04920 1241 aa12.2□□□□□ -0.46
STRADA-240ENST00000639816 MROH2BQ7Z745 1585 aa12.2□□□□□ -0.46
STRADA-240ENST00000639816 ARHGEF11O15085 1522 aa12.2□□□□□ -0.46
STRADA-240ENST00000639816 FANCD2Q9BXW9 1451 aa12.2□□□□□ -0.46
STRADA-240ENST00000639816 ATXN8OSP0DMR3 200 aa12.19□□□□□ -0.46
STRADA-240ENST00000639816 PRDM2Q13029 1718 aa12.13□□□□□ -0.47
STRADA-240ENST00000639816 MYCNP04198 464 aaPredicted RBP12.12□□□□□ -0.47
STRADA-240ENST00000639816 CFTRP13569 1480 aa12.09□□□□□ -0.47
STRADA-240ENST00000639816 URB2Q14146 1524 aaKnown RBP12.09□□□□□ -0.47
STRADA-240ENST00000639816 TRHP20396 242 aaPredicted RBP12.08□□□□□ -0.48
STRADA-240ENST00000639816 WIZO95785 1651 aa12.07□□□□□ -0.48
STRADA-240ENST00000639816 MSH5O43196 834 aa12.06□□□□□ -0.48
STRADA-240ENST00000639816 IFT140Q96RY7 1462 aa12.05□□□□□ -0.48
STRADA-240ENST00000639816 CHD1O14646 1710 aa12.03□□□□□ -0.48
STRADA-240ENST00000639816 CYB5RLQ6IPT4 315 aa12.03□□□□□ -0.48
STRADA-240ENST00000639816 EIF4G3O43432 1585 aaKnown RBP12.02□□□□□ -0.49
STRADA-240ENST00000639816 ARAP1Q96P48 1450 aa12.02□□□□□ -0.49
STRADA-240ENST00000639816 RSF1Q96T23 1441 aaPredicted RBP12.01□□□□□ -0.49
STRADA-240ENST00000639816 HOXD11P31277 338 aaPredicted RBP12□□□□□ -0.49
STRADA-240ENST00000639816 ZNF608Q9ULD9 1512 aaPredicted RBP11.99□□□□□ -0.49
STRADA-240ENST00000639816 PLCB2Q00722 1185 aa11.97□□□□□ -0.49
STRADA-240ENST00000639816 TOP2AP11388 1531 aaKnown RBP11.94□□□□□ -0.5
STRADA-240ENST00000639816 ABCC8Q09428 1581 aa11.93□□□□□ -0.5
STRADA-240ENST00000639816 TOPBP1Q92547 1522 aa11.91□□□□□ -0.5
STRADA-240ENST00000639816 DNMBPQ6XZF7 1577 aa11.88□□□□□ -0.51
STRADA-240ENST00000639816 DMRT2Q9Y5R5 561 aa11.88□□□□□ -0.51
STRADA-240ENST00000639816 TARBP1Q13395 1621 aaKnown RBP11.87□□□□□ -0.51
STRADA-240ENST00000639816 PRKCSHP14314 528 aaPredicted RBP11.86□□□□□ -0.51
STRADA-240ENST00000639816 HAP1P54257 671 aaPredicted RBP11.86□□□□□ -0.51
STRADA-240ENST00000639816 SYNJ1O43426 1573 aa11.85□□□□□ -0.51
STRADA-240ENST00000639816 WDR97A6NE52 1622 aa11.84□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 18.6 ms