RNA–Protein interactions for RNA: ENST00000639306.1

KCNA1-203, Transcript of potassium voltage-gated channel subfamily A member 1, humanhuman

TSL 5

Gene KCNA1, Length 2,618 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KCNA1-203ENST00000639306 NISCHQ9Y2I1 1504 aa25.76■■□□□ 1.71
KCNA1-203ENST00000639306 CCDC180Q9P1Z9 1646 aa22.54■■□□□ 1.2
KCNA1-203ENST00000639306 ZCCHC6Q5VYS8 1495 aaKnown RBP21.7■■□□□ 1.06
KCNA1-203ENST00000639306 SHROOM4Q9ULL8 1493 aa21.44■■□□□ 1.02
KCNA1-203ENST00000639306 DCAF1Q9Y4B6 1507 aa21.44■■□□□ 1.02
KCNA1-203ENST00000639306 MYO15BQ96JP2 1530 aa21.17■□□□□ 0.98
KCNA1-203ENST00000639306 DCAF8L2P0C7V8 631 aa20.91■□□□□ 0.94
KCNA1-203ENST00000639306 ABCC9O60706 1549 aa20.91■□□□□ 0.94
KCNA1-203ENST00000639306 NACADO15069 1562 aa20.9■□□□□ 0.94
KCNA1-203ENST00000639306 SUPT5HO00267 1087 aaKnown RBP20.9■□□□□ 0.94
KCNA1-203ENST00000639306 RB1CC1Q8TDY2 1594 aa20.66■□□□□ 0.9
KCNA1-203ENST00000639306 SCRIBQ14160 1630 aa20.53■□□□□ 0.88
KCNA1-203ENST00000639306 UNC13AQ9UPW8 1703 aa20.26■□□□□ 0.83
KCNA1-203ENST00000639306 CHIC1Q5VXU3 224 aa20.16■□□□□ 0.82
KCNA1-203ENST00000639306 BICRAQ9NZM4 1560 aa20.01■□□□□ 0.79
KCNA1-203ENST00000639306 RSF1Q96T23 1441 aaPredicted RBP19.98■□□□□ 0.79
KCNA1-203ENST00000639306 BAZ1AQ9NRL2 1556 aaPredicted RBP19.91■□□□□ 0.78
KCNA1-203ENST00000639306 HRCP23327 699 aa19.9■□□□□ 0.78
KCNA1-203ENST00000639306 PCGF6Q9BYE7 350 aa19.9■□□□□ 0.78
KCNA1-203ENST00000639306 CECR2Q9BXF3 1484 aa19.9■□□□□ 0.78
KCNA1-203ENST00000639306 MROH2BQ7Z745 1585 aa19.84■□□□□ 0.77
KCNA1-203ENST00000639306 PPARGC1BQ86YN6 1023 aaKnown RBP19.81■□□□□ 0.76
KCNA1-203ENST00000639306 SMARCA4P51532 1647 aa19.79■□□□□ 0.76
KCNA1-203ENST00000639306 LOC105371045A0A1W2PR82 267 aa19.72■□□□□ 0.75
KCNA1-203ENST00000639306 WIZO95785 1651 aa19.7■□□□□ 0.74
KCNA1-203ENST00000639306 PABPN1Q86U42 306 aaKnown RBP eCLIP19.66■□□□□ 0.74
KCNA1-203ENST00000639306 PEG3Q9GZU2 1588 aa19.63■□□□□ 0.73
KCNA1-203ENST00000639306 TOP2AP11388 1531 aaKnown RBP19.57■□□□□ 0.72
KCNA1-203ENST00000639306 SMARCA2P51531 1590 aa19.45■□□□□ 0.7
KCNA1-203ENST00000639306 ATAD2BQ9ULI0 1458 aa19.39■□□□□ 0.7
KCNA1-203ENST00000639306 FAM9AQ8IZU1 332 aaPredicted RBP19.38■□□□□ 0.69
KCNA1-203ENST00000639306 EHMT2Q96KQ7 1210 aa19.38■□□□□ 0.69
KCNA1-203ENST00000639306 EIF4G1Q04637 1599 aaKnown RBP19.38■□□□□ 0.69
KCNA1-203ENST00000639306 TRIM41Q8WV44 630 aa19.32■□□□□ 0.68
KCNA1-203ENST00000639306 CCDC88BA6NC98 1476 aa19.29■□□□□ 0.68
KCNA1-203ENST00000639306 HMGXB3Q12766 1538 aa19.29■□□□□ 0.68
KCNA1-203ENST00000639306 BAZ1BQ9UIG0 1483 aaKnown RBP19.28■□□□□ 0.68
KCNA1-203ENST00000639306 NCAPD3P42695 1498 aa19.25■□□□□ 0.67
KCNA1-203ENST00000639306 TRIM26Q12899 539 aaPredicted RBP19.15■□□□□ 0.66
KCNA1-203ENST00000639306 CC2D2AQ9P2K1 1620 aa19.04■□□□□ 0.64
KCNA1-203ENST00000639306 ABCC8Q09428 1581 aa18.92■□□□□ 0.62
KCNA1-203ENST00000639306 PRDM2Q13029 1718 aa18.88■□□□□ 0.61
KCNA1-203ENST00000639306 CFTRP13569 1480 aa18.84■□□□□ 0.61
KCNA1-203ENST00000639306 WRNQ14191 1432 aaPredicted RBP eCLIP18.8■□□□□ 0.6
KCNA1-203ENST00000639306 SYNJ1O43426 1573 aa18.73■□□□□ 0.59
KCNA1-203ENST00000639306 BIVM-ERCC5R4GMW8 1640 aa18.73■□□□□ 0.59
KCNA1-203ENST00000639306 TOP2BQ02880 1626 aa18.72■□□□□ 0.59
KCNA1-203ENST00000639306 SCAF1Q9H7N4 1312 aaKnown RBP18.71■□□□□ 0.59
KCNA1-203ENST00000639306 CADPSQ9ULU8 1353 aa18.71■□□□□ 0.59
KCNA1-203ENST00000639306 EEA1Q15075 1411 aa18.71■□□□□ 0.59
KCNA1-203ENST00000639306 ZEB1P37275 1124 aaPredicted RBP18.7■□□□□ 0.58
KCNA1-203ENST00000639306 SOGA1O94964 1423 aa18.7■□□□□ 0.58
KCNA1-203ENST00000639306 RUSC2Q8N2Y8 1516 aa18.68■□□□□ 0.58
KCNA1-203ENST00000639306 TTBK1Q5TCY1 1321 aaPredicted RBP18.68■□□□□ 0.58
KCNA1-203ENST00000639306 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP18.62■□□□□ 0.57
KCNA1-203ENST00000639306 LAMC3Q9Y6N6 1575 aa18.61■□□□□ 0.57
KCNA1-203ENST00000639306 CUX1P39880 1505 aa18.57■□□□□ 0.56
KCNA1-203ENST00000639306 FANCD2Q9BXW9 1451 aa18.49■□□□□ 0.55
KCNA1-203ENST00000639306 CCER1Q8TC90 406 aaPredicted RBP18.48■□□□□ 0.55
KCNA1-203ENST00000639306 CSRNP3Q8WYN3 585 aa18.47■□□□□ 0.55
KCNA1-203ENST00000639306 CEP162Q5TB80 1403 aa18.46■□□□□ 0.55
KCNA1-203ENST00000639306 UBTFP17480 764 aaKnown RBP18.46■□□□□ 0.55
KCNA1-203ENST00000639306 KIF21BO75037 1637 aa18.46■□□□□ 0.55
KCNA1-203ENST00000639306 DNMBPQ6XZF7 1577 aa18.43■□□□□ 0.54
KCNA1-203ENST00000639306 NESP48681 1621 aa18.41■□□□□ 0.54
KCNA1-203ENST00000639306 PDS5BQ9NTI5 1447 aa18.39■□□□□ 0.53
KCNA1-203ENST00000639306 CEP164Q9UPV0 1460 aa18.39■□□□□ 0.53
KCNA1-203ENST00000639306 GOLGA3Q08378 1498 aa18.38■□□□□ 0.53
KCNA1-203ENST00000639306 NEUROD1Q13562 356 aa18.36■□□□□ 0.53
KCNA1-203ENST00000639306 RANGAP1P46060 587 aaPredicted RBP18.36■□□□□ 0.53
KCNA1-203ENST00000639306 TNIKQ9UKE5 1360 aa18.35■□□□□ 0.53
KCNA1-203ENST00000639306 KIF27Q86VH2 1401 aa18.33■□□□□ 0.53
KCNA1-203ENST00000639306 TOPBP1Q92547 1522 aa18.33■□□□□ 0.52
KCNA1-203ENST00000639306 FGD5Q6ZNL6 1462 aa18.33■□□□□ 0.52
KCNA1-203ENST00000639306 ERICH3Q5RHP9 1530 aa18.31■□□□□ 0.52
KCNA1-203ENST00000639306 KIF21AQ7Z4S6 1674 aa18.3■□□□□ 0.52
KCNA1-203ENST00000639306 PELP1Q8IZL8 1130 aaKnown RBP18.3■□□□□ 0.52
KCNA1-203ENST00000639306 DNAJC5BQ9UF47 199 aa18.29■□□□□ 0.52
KCNA1-203ENST00000639306 ACIN1Q9UKV3 1341 aaKnown RBP18.27■□□□□ 0.52
KCNA1-203ENST00000639306 PRXQ9BXM0 1461 aa18.27■□□□□ 0.52
KCNA1-203ENST00000639306 URB2Q14146 1524 aaKnown RBP18.25■□□□□ 0.51
KCNA1-203ENST00000639306 DIEXFQ68CQ4 756 aaKnown RBP18.25■□□□□ 0.51
KCNA1-203ENST00000639306 ABCA10Q8WWZ4 1543 aa18.24■□□□□ 0.51
KCNA1-203ENST00000639306 POLA1P09884 1462 aaPredicted RBP18.23■□□□□ 0.51
KCNA1-203ENST00000639306 WDR97A6NE52 1622 aa18.22■□□□□ 0.51
KCNA1-203ENST00000639306 GTF3C3Q9Y5Q9 886 aa18.21■□□□□ 0.51
KCNA1-203ENST00000639306 RAPGEF2Q9Y4G8 1499 aa18.21■□□□□ 0.51
KCNA1-203ENST00000639306 CUX2O14529 1486 aa18.2■□□□□ 0.5
KCNA1-203ENST00000639306 MRC2Q9UBG0 1479 aa18.15■□□□□ 0.5
KCNA1-203ENST00000639306 YTHDC1Q96MU7 727 aaKnown RBP18.13■□□□□ 0.49
KCNA1-203ENST00000639306 IGF1RP08069 1367 aa18.12■□□□□ 0.49
KCNA1-203ENST00000639306 CLIP1P30622 1438 aa18.12■□□□□ 0.49
KCNA1-203ENST00000639306 CUL7Q14999 1698 aa18.11■□□□□ 0.49
KCNA1-203ENST00000639306 ABCA5Q8WWZ7 1642 aa18.1■□□□□ 0.49
KCNA1-203ENST00000639306 RAD54L2Q9Y4B4 1467 aa18.1■□□□□ 0.49
KCNA1-203ENST00000639306 WDR62O43379 1518 aa18.1■□□□□ 0.49
KCNA1-203ENST00000639306 TARBP1Q13395 1621 aaKnown RBP18.09■□□□□ 0.49
KCNA1-203ENST00000639306 HNRNPUL2Q1KMD3 747 aaKnown RBP18.07■□□□□ 0.48
KCNA1-203ENST00000639306 CENPBP07199 599 aaPredicted RBP18.04■□□□□ 0.48
KCNA1-203ENST00000639306 CARMIL1Q5VZK9 1371 aa18.02■□□□□ 0.48
Retrieved 100 of 20,778 RNA–protein pairs in 40.9 ms