RNA–Protein interactions for RNA: ENST00000639189.1

MED17-217, Transcript of mediator complex subunit 17, humanhuman

TSL 5

Gene MED17, Length 3,235 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MED17-217ENST00000639189 NISCHQ9Y2I1 1504 aa34.08■■■■□ 3.05
MED17-217ENST00000639189 CCDC180Q9P1Z9 1646 aa29.15■■■□□ 2.26
MED17-217ENST00000639189 DCAF8L2P0C7V8 631 aa28.85■■■□□ 2.21
MED17-217ENST00000639189 SHROOM4Q9ULL8 1493 aa28.82■■■□□ 2.2
MED17-217ENST00000639189 ZCCHC6Q5VYS8 1495 aaKnown RBP28.66■■■□□ 2.18
MED17-217ENST00000639189 SUPT5HO00267 1087 aaKnown RBP27.96■■■□□ 2.07
MED17-217ENST00000639189 ABCC9O60706 1549 aa27.91■■■□□ 2.06
MED17-217ENST00000639189 DCAF1Q9Y4B6 1507 aa27.85■■■□□ 2.05
MED17-217ENST00000639189 SCRIBQ14160 1630 aa27.41■■□□□ 1.98
MED17-217ENST00000639189 HRCP23327 699 aa27.31■■□□□ 1.96
MED17-217ENST00000639189 MYO15BQ96JP2 1530 aa27.29■■□□□ 1.96
MED17-217ENST00000639189 PELP1Q8IZL8 1130 aaKnown RBP27.22■■□□□ 1.95
MED17-217ENST00000639189 NACADO15069 1562 aa27.21■■□□□ 1.95
MED17-217ENST00000639189 RB1CC1Q8TDY2 1594 aa26.95■■□□□ 1.91
MED17-217ENST00000639189 RSF1Q96T23 1441 aaPredicted RBP26.75■■□□□ 1.87
MED17-217ENST00000639189 CECR2Q9BXF3 1484 aa26.71■■□□□ 1.87
MED17-217ENST00000639189 CHIC1Q5VXU3 224 aa26.7■■□□□ 1.87
MED17-217ENST00000639189 PABPN1Q86U42 306 aaKnown RBP eCLIP26.64■■□□□ 1.86
MED17-217ENST00000639189 PPARGC1BQ86YN6 1023 aaKnown RBP26.6■■□□□ 1.85
MED17-217ENST00000639189 MROH2BQ7Z745 1585 aa26.5■■□□□ 1.83
MED17-217ENST00000639189 UNC13AQ9UPW8 1703 aa26.38■■□□□ 1.81
MED17-217ENST00000639189 MYT1Q01538 1121 aa26.35■■□□□ 1.81
MED17-217ENST00000639189 PCGF6Q9BYE7 350 aa26.33■■□□□ 1.81
MED17-217ENST00000639189 WIZO95785 1651 aa26.27■■□□□ 1.8
MED17-217ENST00000639189 BAZ1AQ9NRL2 1556 aaPredicted RBP26.22■■□□□ 1.79
MED17-217ENST00000639189 BICRAQ9NZM4 1560 aa26.19■■□□□ 1.78
MED17-217ENST00000639189 SCAF1Q9H7N4 1312 aaKnown RBP26.13■■□□□ 1.77
MED17-217ENST00000639189 SMARCA4P51532 1647 aa26.06■■□□□ 1.76
MED17-217ENST00000639189 TRIM41Q8WV44 630 aa26.04■■□□□ 1.76
MED17-217ENST00000639189 LOC105371045A0A1W2PR82 267 aa25.98■■□□□ 1.75
MED17-217ENST00000639189 FAM9AQ8IZU1 332 aaPredicted RBP25.91■■□□□ 1.74
MED17-217ENST00000639189 TOP2AP11388 1531 aaKnown RBP25.83■■□□□ 1.73
MED17-217ENST00000639189 EHMT2Q96KQ7 1210 aa25.8■■□□□ 1.72
MED17-217ENST00000639189 CCDC88BA6NC98 1476 aa25.78■■□□□ 1.72
MED17-217ENST00000639189 SMARCA2P51531 1590 aa25.67■■□□□ 1.7
MED17-217ENST00000639189 ATAD2BQ9ULI0 1458 aa25.64■■□□□ 1.69
MED17-217ENST00000639189 BAZ1BQ9UIG0 1483 aaKnown RBP25.57■■□□□ 1.68
MED17-217ENST00000639189 ABCC8Q09428 1581 aa25.51■■□□□ 1.67
MED17-217ENST00000639189 PEG3Q9GZU2 1588 aa25.51■■□□□ 1.67
MED17-217ENST00000639189 EIF4G1Q04637 1599 aaKnown RBP25.48■■□□□ 1.67
MED17-217ENST00000639189 ZEB1P37275 1124 aaPredicted RBP25.44■■□□□ 1.66
MED17-217ENST00000639189 TRIM26Q12899 539 aaPredicted RBP25.43■■□□□ 1.66
MED17-217ENST00000639189 ACIN1Q9UKV3 1341 aaKnown RBP25.31■■□□□ 1.64
MED17-217ENST00000639189 NCAPD3P42695 1498 aa25.23■■□□□ 1.63
MED17-217ENST00000639189 WRNQ14191 1432 aaPredicted RBP eCLIP25.19■■□□□ 1.62
MED17-217ENST00000639189 NEUROD1Q13562 356 aa25.18■■□□□ 1.62
MED17-217ENST00000639189 SOGA1O94964 1423 aa25.18■■□□□ 1.62
MED17-217ENST00000639189 HMGXB3Q12766 1538 aa25.1■■□□□ 1.61
MED17-217ENST00000639189 GTF3C3Q9Y5Q9 886 aa25.08■■□□□ 1.6
MED17-217ENST00000639189 RUSC2Q8N2Y8 1516 aa25.07■■□□□ 1.6
MED17-217ENST00000639189 CSRNP3Q8WYN3 585 aa25.01■■□□□ 1.59
MED17-217ENST00000639189 SYNJ1O43426 1573 aa25.01■■□□□ 1.59
MED17-217ENST00000639189 CC2D2AQ9P2K1 1620 aa24.99■■□□□ 1.59
MED17-217ENST00000639189 UBTFP17480 764 aaKnown RBP24.96■■□□□ 1.59
MED17-217ENST00000639189 TTBK1Q5TCY1 1321 aaPredicted RBP24.93■■□□□ 1.58
MED17-217ENST00000639189 CENPBP07199 599 aaPredicted RBP24.86■■□□□ 1.57
MED17-217ENST00000639189 CFTRP13569 1480 aa24.84■■□□□ 1.57
MED17-217ENST00000639189 EEA1Q15075 1411 aa24.81■■□□□ 1.56
MED17-217ENST00000639189 RANGAP1P46060 587 aaPredicted RBP24.78■■□□□ 1.56
MED17-217ENST00000639189 CADPSQ9ULU8 1353 aa24.77■■□□□ 1.56
MED17-217ENST00000639189 DNAJC5BQ9UF47 199 aa24.76■■□□□ 1.55
MED17-217ENST00000639189 TOP2BQ02880 1626 aa24.71■■□□□ 1.55
MED17-217ENST00000639189 CEP162Q5TB80 1403 aa24.71■■□□□ 1.55
MED17-217ENST00000639189 CUX1P39880 1505 aa24.7■■□□□ 1.54
MED17-217ENST00000639189 TNIKQ9UKE5 1360 aa24.68■■□□□ 1.54
MED17-217ENST00000639189 GOLGA3Q08378 1498 aa24.67■■□□□ 1.54
MED17-217ENST00000639189 NESP48681 1621 aa24.61■■□□□ 1.53
MED17-217ENST00000639189 CEP164Q9UPV0 1460 aa24.6■■□□□ 1.53
MED17-217ENST00000639189 RAPGEF2Q9Y4G8 1499 aa24.57■■□□□ 1.52
MED17-217ENST00000639189 BIVM-ERCC5R4GMW8 1640 aa24.57■■□□□ 1.52
MED17-217ENST00000639189 FANCD2Q9BXW9 1451 aa24.53■■□□□ 1.52
MED17-217ENST00000639189 DIEXFQ68CQ4 756 aaKnown RBP24.52■■□□□ 1.52
MED17-217ENST00000639189 BCL11AQ9H165 835 aa24.52■■□□□ 1.52
MED17-217ENST00000639189 KIF27Q86VH2 1401 aa24.48■■□□□ 1.51
MED17-217ENST00000639189 KIF21BO75037 1637 aa24.44■■□□□ 1.5
MED17-217ENST00000639189 CUX2O14529 1486 aa24.43■■□□□ 1.5
MED17-217ENST00000639189 CLIP1P30622 1438 aa24.43■■□□□ 1.5
MED17-217ENST00000639189 FGD5Q6ZNL6 1462 aa24.41■■□□□ 1.5
MED17-217ENST00000639189 PRDM2Q13029 1718 aa24.37■■□□□ 1.49
MED17-217ENST00000639189 PRXQ9BXM0 1461 aa24.34■■□□□ 1.49
MED17-217ENST00000639189 RAD54L2Q9Y4B4 1467 aa24.3■■□□□ 1.48
MED17-217ENST00000639189 IGF1RP08069 1367 aa24.28■■□□□ 1.48
MED17-217ENST00000639189 TOPBP1Q92547 1522 aa24.25■■□□□ 1.47
MED17-217ENST00000639189 APLP2Q06481 763 aa24.23■■□□□ 1.47
MED17-217ENST00000639189 LAMC3Q9Y6N6 1575 aa24.22■■□□□ 1.47
MED17-217ENST00000639189 PDS5BQ9NTI5 1447 aa24.22■■□□□ 1.47
MED17-217ENST00000639189 POLA1P09884 1462 aaPredicted RBP24.21■■□□□ 1.47
MED17-217ENST00000639189 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP24.2■■□□□ 1.47
MED17-217ENST00000639189 CARMIL1Q5VZK9 1371 aa24.2■■□□□ 1.46
MED17-217ENST00000639189 ERICH3Q5RHP9 1530 aa24.2■■□□□ 1.46
MED17-217ENST00000639189 DNMBPQ6XZF7 1577 aa24.2■■□□□ 1.46
MED17-217ENST00000639189 ANP32EQ9BTT0 268 aa24.18■■□□□ 1.46
MED17-217ENST00000639189 URB2Q14146 1524 aaKnown RBP24.17■■□□□ 1.46
MED17-217ENST00000639189 CCER1Q8TC90 406 aaPredicted RBP24.17■■□□□ 1.46
MED17-217ENST00000639189 VPS8Q8N3P4 1428 aa24.16■■□□□ 1.46
MED17-217ENST00000639189 TDRD9Q8NDG6 1382 aaKnown RBP24.13■■□□□ 1.45
MED17-217ENST00000639189 YTHDC1Q96MU7 727 aaKnown RBP24.08■■□□□ 1.44
MED17-217ENST00000639189 P3H3Q8IVL6 736 aa24.07■■□□□ 1.44
MED17-217ENST00000639189 ABCA10Q8WWZ4 1543 aa24.05■■□□□ 1.44
MED17-217ENST00000639189 ARAP1Q96P48 1450 aa24.04■■□□□ 1.44
Retrieved 100 of 20,778 RNA–protein pairs in 13.5 ms