RNA–Protein interactions for RNA: ENST00000639115.1

ME2-209, Transcript of malic enzyme 2, humanhuman

TSL 5

Gene ME2, Length 2,524 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ME2-209ENST00000639115 NISCHQ9Y2I1 1504 aa43.93■■■■■ 4.62
ME2-209ENST00000639115 CCDC180Q9P1Z9 1646 aa37.42■■■■□ 3.58
ME2-209ENST00000639115 SHROOM4Q9ULL8 1493 aa37.36■■■■□ 3.57
ME2-209ENST00000639115 ZCCHC6Q5VYS8 1495 aaKnown RBP37.14■■■■□ 3.54
ME2-209ENST00000639115 SUPT5HO00267 1087 aaKnown RBP36.58■■■■□ 3.45
ME2-209ENST00000639115 DCAF8L2P0C7V8 631 aa36.43■■■■□ 3.42
ME2-209ENST00000639115 DCAF1Q9Y4B6 1507 aa36.04■■■■□ 3.36
ME2-209ENST00000639115 CHIC1Q5VXU3 224 aa35.52■■■■□ 3.28
ME2-209ENST00000639115 MYO15BQ96JP2 1530 aa35.37■■■■□ 3.25
ME2-209ENST00000639115 SCRIBQ14160 1630 aa35.06■■■■□ 3.2
ME2-209ENST00000639115 ABCC9O60706 1549 aa35.03■■■■□ 3.2
ME2-209ENST00000639115 RSF1Q96T23 1441 aaPredicted RBP34.71■■■■□ 3.15
ME2-209ENST00000639115 NACADO15069 1562 aa34.61■■■■□ 3.13
ME2-209ENST00000639115 LOC105371045A0A1W2PR82 267 aa34.46■■■■□ 3.11
ME2-209ENST00000639115 RB1CC1Q8TDY2 1594 aa34.35■■■■□ 3.09
ME2-209ENST00000639115 PCGF6Q9BYE7 350 aa34.31■■■■□ 3.08
ME2-209ENST00000639115 CECR2Q9BXF3 1484 aa34.26■■■■□ 3.08
ME2-209ENST00000639115 HRCP23327 699 aa34.24■■■■□ 3.07
ME2-209ENST00000639115 MROH2BQ7Z745 1585 aa34.15■■■■□ 3.06
ME2-209ENST00000639115 TRIM41Q8WV44 630 aa34.09■■■■□ 3.05
ME2-209ENST00000639115 WIZO95785 1651 aa33.98■■■■□ 3.03
ME2-209ENST00000639115 FAM9AQ8IZU1 332 aaPredicted RBP33.81■■■■□ 3
ME2-209ENST00000639115 BAZ1AQ9NRL2 1556 aaPredicted RBP33.75■■■□□ 2.99
ME2-209ENST00000639115 TRIM26Q12899 539 aaPredicted RBP33.69■■■□□ 2.98
ME2-209ENST00000639115 UNC13AQ9UPW8 1703 aa33.6■■■□□ 2.97
ME2-209ENST00000639115 PPARGC1BQ86YN6 1023 aaKnown RBP33.55■■■□□ 2.96
ME2-209ENST00000639115 EHMT2Q96KQ7 1210 aa33.52■■■□□ 2.96
ME2-209ENST00000639115 SMARCA4P51532 1647 aa33.49■■■□□ 2.95
ME2-209ENST00000639115 EIF4G1Q04637 1599 aaKnown RBP33.47■■■□□ 2.95
ME2-209ENST00000639115 TOP2AP11388 1531 aaKnown RBP33.44■■■□□ 2.94
ME2-209ENST00000639115 CCDC88BA6NC98 1476 aa33.29■■■□□ 2.92
ME2-209ENST00000639115 SMARCA2P51531 1590 aa33.25■■■□□ 2.91
ME2-209ENST00000639115 PABPN1Q86U42 306 aaKnown RBP eCLIP33.19■■■□□ 2.9
ME2-209ENST00000639115 ABCC8Q09428 1581 aa33.17■■■□□ 2.9
ME2-209ENST00000639115 BICRAQ9NZM4 1560 aa33.15■■■□□ 2.9
ME2-209ENST00000639115 ZEB1P37275 1124 aaPredicted RBP32.9■■■□□ 2.86
ME2-209ENST00000639115 PEG3Q9GZU2 1588 aa32.84■■■□□ 2.85
ME2-209ENST00000639115 SOGA1O94964 1423 aa32.83■■■□□ 2.85
ME2-209ENST00000639115 RUSC2Q8N2Y8 1516 aa32.67■■■□□ 2.82
ME2-209ENST00000639115 EEA1Q15075 1411 aa32.65■■■□□ 2.82
ME2-209ENST00000639115 ATAD2BQ9ULI0 1458 aa32.64■■■□□ 2.82
ME2-209ENST00000639115 CSRNP3Q8WYN3 585 aa32.63■■■□□ 2.81
ME2-209ENST00000639115 CEP162Q5TB80 1403 aa32.63■■■□□ 2.81
ME2-209ENST00000639115 WRNQ14191 1432 aaPredicted RBP eCLIP32.62■■■□□ 2.81
ME2-209ENST00000639115 TNIKQ9UKE5 1360 aa32.58■■■□□ 2.81
ME2-209ENST00000639115 BAZ1BQ9UIG0 1483 aaKnown RBP32.56■■■□□ 2.8
ME2-209ENST00000639115 UBTFP17480 764 aaKnown RBP32.49■■■□□ 2.79
ME2-209ENST00000639115 SYNJ1O43426 1573 aa32.48■■■□□ 2.79
ME2-209ENST00000639115 GOLGA3Q08378 1498 aa32.43■■■□□ 2.78
ME2-209ENST00000639115 TTBK1Q5TCY1 1321 aaPredicted RBP32.42■■■□□ 2.78
ME2-209ENST00000639115 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP32.37■■■□□ 2.77
ME2-209ENST00000639115 CCER1Q8TC90 406 aaPredicted RBP32.29■■■□□ 2.76
ME2-209ENST00000639115 CEP164Q9UPV0 1460 aa32.26■■■□□ 2.75
ME2-209ENST00000639115 KIF21BO75037 1637 aa32.23■■■□□ 2.75
ME2-209ENST00000639115 TOP2BQ02880 1626 aa32.09■■■□□ 2.73
ME2-209ENST00000639115 CLIP1P30622 1438 aa32.05■■■□□ 2.72
ME2-209ENST00000639115 RAPGEF2Q9Y4G8 1499 aa32.03■■■□□ 2.72
ME2-209ENST00000639115 HMGXB3Q12766 1538 aa32.01■■■□□ 2.72
ME2-209ENST00000639115 NCAPD3P42695 1498 aa32.01■■■□□ 2.72
ME2-209ENST00000639115 BIVM-ERCC5R4GMW8 1640 aa31.98■■■□□ 2.71
ME2-209ENST00000639115 VPS8Q8N3P4 1428 aa31.9■■■□□ 2.7
ME2-209ENST00000639115 RANGAP1P46060 587 aaPredicted RBP31.88■■■□□ 2.69
ME2-209ENST00000639115 CUX1P39880 1505 aa31.8■■■□□ 2.68
ME2-209ENST00000639115 APLP2Q06481 763 aa31.75■■■□□ 2.67
ME2-209ENST00000639115 CFTRP13569 1480 aa31.74■■■□□ 2.67
ME2-209ENST00000639115 PRXQ9BXM0 1461 aa31.73■■■□□ 2.67
ME2-209ENST00000639115 ERICH3Q5RHP9 1530 aa31.72■■■□□ 2.67
ME2-209ENST00000639115 HNRNPUL2Q1KMD3 747 aaKnown RBP31.71■■■□□ 2.67
ME2-209ENST00000639115 KIF27Q86VH2 1401 aa31.62■■■□□ 2.65
ME2-209ENST00000639115 DIEXFQ68CQ4 756 aaKnown RBP31.57■■■□□ 2.65
ME2-209ENST00000639115 ARAP1Q96P48 1450 aa31.55■■■□□ 2.64
ME2-209ENST00000639115 PRDM2Q13029 1718 aa31.52■■■□□ 2.64
ME2-209ENST00000639115 SCAF1Q9H7N4 1312 aaKnown RBP31.46■■■□□ 2.63
ME2-209ENST00000639115 CADPSQ9ULU8 1353 aa31.4■■■□□ 2.62
ME2-209ENST00000639115 ZNF316A6NFI3 1004 aaPredicted RBP31.38■■■□□ 2.61
ME2-209ENST00000639115 KANK4Q5T7N3 995 aaPredicted RBP31.36■■■□□ 2.61
ME2-209ENST00000639115 CUX2O14529 1486 aa31.35■■■□□ 2.61
ME2-209ENST00000639115 ARHGAP35Q9NRY4 1499 aa31.3■■■□□ 2.6
ME2-209ENST00000639115 CC2D2AQ9P2K1 1620 aa31.28■■■□□ 2.6
ME2-209ENST00000639115 IGF1RP08069 1367 aa31.28■■■□□ 2.6
ME2-209ENST00000639115 FGD5Q6ZNL6 1462 aa31.25■■■□□ 2.59
ME2-209ENST00000639115 ACIN1Q9UKV3 1341 aaKnown RBP31.22■■■□□ 2.59
ME2-209ENST00000639115 NEUROD1Q13562 356 aa31.2■■■□□ 2.58
ME2-209ENST00000639115 CARMIL1Q5VZK9 1371 aa31.15■■■□□ 2.58
ME2-209ENST00000639115 RRBP1Q9P2E9 1410 aaKnown RBP31.13■■■□□ 2.57
ME2-209ENST00000639115 FANCD2Q9BXW9 1451 aa31.11■■■□□ 2.57
ME2-209ENST00000639115 DHX57Q6P158 1386 aaKnown RBP31.08■■■□□ 2.57
ME2-209ENST00000639115 CENPBP07199 599 aaPredicted RBP31.07■■■□□ 2.57
ME2-209ENST00000639115 CCNB3Q8WWL7 1395 aa31.02■■■□□ 2.56
ME2-209ENST00000639115 CLSPNQ9HAW4 1339 aa31.01■■■□□ 2.55
ME2-209ENST00000639115 DNMBPQ6XZF7 1577 aa30.96■■■□□ 2.55
ME2-209ENST00000639115 TIAM1Q13009 1591 aa30.95■■■□□ 2.54
ME2-209ENST00000639115 RAD54L2Q9Y4B4 1467 aa30.95■■■□□ 2.54
ME2-209ENST00000639115 NESP48681 1621 aa30.93■■■□□ 2.54
ME2-209ENST00000639115 ITGAEP38570 1179 aa30.92■■■□□ 2.54
ME2-209ENST00000639115 MIER1Q8N108 512 aa30.92■■■□□ 2.54
ME2-209ENST00000639115 TOPBP1Q92547 1522 aa30.9■■■□□ 2.54
ME2-209ENST00000639115 MAP3K1Q13233 1512 aa30.9■■■□□ 2.54
ME2-209ENST00000639115 POLA1P09884 1462 aaPredicted RBP30.88■■■□□ 2.53
ME2-209ENST00000639115 ABCA10Q8WWZ4 1543 aa30.87■■■□□ 2.53
Retrieved 100 of 20,778 RNA–protein pairs in 15.4 ms