RNA–Protein interactions for RNA: ENST00000638487.1

MED17-214, Transcript of mediator complex subunit 17, humanhuman

TSL 5

Gene MED17, Length 3,622 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MED17-214ENST00000638487 NISCHQ9Y2I1 1504 aa28.36■■■□□ 2.13
MED17-214ENST00000638487 CCDC180Q9P1Z9 1646 aa24.5■■□□□ 1.51
MED17-214ENST00000638487 ZCCHC6Q5VYS8 1495 aaKnown RBP23.88■■□□□ 1.41
MED17-214ENST00000638487 SHROOM4Q9ULL8 1493 aa23.42■■□□□ 1.34
MED17-214ENST00000638487 DCAF1Q9Y4B6 1507 aa23.38■■□□□ 1.33
MED17-214ENST00000638487 DCAF8L2P0C7V8 631 aa23.31■■□□□ 1.32
MED17-214ENST00000638487 ABCC9O60706 1549 aa23.01■■□□□ 1.27
MED17-214ENST00000638487 MYO15BQ96JP2 1530 aa22.97■■□□□ 1.27
MED17-214ENST00000638487 NACADO15069 1562 aa22.74■■□□□ 1.23
MED17-214ENST00000638487 SCRIBQ14160 1630 aa22.68■■□□□ 1.22
MED17-214ENST00000638487 SUPT5HO00267 1087 aaKnown RBP22.63■■□□□ 1.21
MED17-214ENST00000638487 RB1CC1Q8TDY2 1594 aa22.47■■□□□ 1.19
MED17-214ENST00000638487 PPARGC1BQ86YN6 1023 aaKnown RBP22.31■■□□□ 1.16
MED17-214ENST00000638487 PELP1Q8IZL8 1130 aaKnown RBP22.23■■□□□ 1.15
MED17-214ENST00000638487 UNC13AQ9UPW8 1703 aa22.2■■□□□ 1.15
MED17-214ENST00000638487 HRCP23327 699 aa22.17■■□□□ 1.14
MED17-214ENST00000638487 RSF1Q96T23 1441 aaPredicted RBP22.15■■□□□ 1.14
MED17-214ENST00000638487 CECR2Q9BXF3 1484 aa22.1■■□□□ 1.13
MED17-214ENST00000638487 MROH2BQ7Z745 1585 aa21.98■■□□□ 1.11
MED17-214ENST00000638487 BICRAQ9NZM4 1560 aa21.95■■□□□ 1.1
MED17-214ENST00000638487 PCGF6Q9BYE7 350 aa21.86■■□□□ 1.09
MED17-214ENST00000638487 CHIC1Q5VXU3 224 aa21.85■■□□□ 1.09
MED17-214ENST00000638487 WIZO95785 1651 aa21.82■■□□□ 1.08
MED17-214ENST00000638487 BAZ1AQ9NRL2 1556 aaPredicted RBP21.81■■□□□ 1.08
MED17-214ENST00000638487 PABPN1Q86U42 306 aaKnown RBP eCLIP21.8■■□□□ 1.08
MED17-214ENST00000638487 SMARCA4P51532 1647 aa21.73■■□□□ 1.07
MED17-214ENST00000638487 SCAF1Q9H7N4 1312 aaKnown RBP21.64■■□□□ 1.05
MED17-214ENST00000638487 TOP2AP11388 1531 aaKnown RBP21.51■■□□□ 1.03
MED17-214ENST00000638487 PEG3Q9GZU2 1588 aa21.45■■□□□ 1.02
MED17-214ENST00000638487 MYT1Q01538 1121 aa21.43■■□□□ 1.02
MED17-214ENST00000638487 EIF4G1Q04637 1599 aaKnown RBP21.38■■□□□ 1.01
MED17-214ENST00000638487 SMARCA2P51531 1590 aa21.37■■□□□ 1.01
MED17-214ENST00000638487 CCDC88BA6NC98 1476 aa21.36■■□□□ 1.01
MED17-214ENST00000638487 ATAD2BQ9ULI0 1458 aa21.31■■□□□ 1
MED17-214ENST00000638487 TRIM41Q8WV44 630 aa21.18■□□□□ 0.98
MED17-214ENST00000638487 BAZ1BQ9UIG0 1483 aaKnown RBP21.15■□□□□ 0.98
MED17-214ENST00000638487 LOC105371045A0A1W2PR82 267 aa21.09■□□□□ 0.97
MED17-214ENST00000638487 ABCC8Q09428 1581 aa21.05■□□□□ 0.96
MED17-214ENST00000638487 NCAPD3P42695 1498 aa21.04■□□□□ 0.96
MED17-214ENST00000638487 HMGXB3Q12766 1538 aa21.01■□□□□ 0.95
MED17-214ENST00000638487 FAM9AQ8IZU1 332 aaPredicted RBP20.89■□□□□ 0.93
MED17-214ENST00000638487 GTF3C3Q9Y5Q9 886 aa20.87■□□□□ 0.93
MED17-214ENST00000638487 NEUROD1Q13562 356 aa20.84■□□□□ 0.93
MED17-214ENST00000638487 CC2D2AQ9P2K1 1620 aa20.82■□□□□ 0.92
MED17-214ENST00000638487 WRNQ14191 1432 aaPredicted RBP eCLIP20.77■□□□□ 0.92
MED17-214ENST00000638487 SYNJ1O43426 1573 aa20.76■□□□□ 0.91
MED17-214ENST00000638487 SOGA1O94964 1423 aa20.72■□□□□ 0.91
MED17-214ENST00000638487 ACIN1Q9UKV3 1341 aaKnown RBP20.72■□□□□ 0.91
MED17-214ENST00000638487 CFTRP13569 1480 aa20.68■□□□□ 0.9
MED17-214ENST00000638487 RUSC2Q8N2Y8 1516 aa20.67■□□□□ 0.9
MED17-214ENST00000638487 EHMT2Q96KQ7 1210 aa20.64■□□□□ 0.89
MED17-214ENST00000638487 BCL11AQ9H165 835 aa20.63■□□□□ 0.89
MED17-214ENST00000638487 TOP2BQ02880 1626 aa20.59■□□□□ 0.89
MED17-214ENST00000638487 BIVM-ERCC5R4GMW8 1640 aa20.56■□□□□ 0.88
MED17-214ENST00000638487 PRDM2Q13029 1718 aa20.55■□□□□ 0.88
MED17-214ENST00000638487 EEA1Q15075 1411 aa20.54■□□□□ 0.88
MED17-214ENST00000638487 CADPSQ9ULU8 1353 aa20.52■□□□□ 0.88
MED17-214ENST00000638487 CUX1P39880 1505 aa20.52■□□□□ 0.87
MED17-214ENST00000638487 CSRNP3Q8WYN3 585 aa20.49■□□□□ 0.87
MED17-214ENST00000638487 YTHDC1Q96MU7 727 aaKnown RBP20.44■□□□□ 0.86
MED17-214ENST00000638487 DNAJC5BQ9UF47 199 aa20.42■□□□□ 0.86
MED17-214ENST00000638487 TRIM26Q12899 539 aaPredicted RBP20.41■□□□□ 0.86
MED17-214ENST00000638487 CENPBP07199 599 aaPredicted RBP20.38■□□□□ 0.85
MED17-214ENST00000638487 PRKCSHP14314 528 aaPredicted RBP20.37■□□□□ 0.85
MED17-214ENST00000638487 NESP48681 1621 aa20.36■□□□□ 0.85
MED17-214ENST00000638487 TNIKQ9UKE5 1360 aa20.34■□□□□ 0.85
MED17-214ENST00000638487 KIF21BO75037 1637 aa20.34■□□□□ 0.85
MED17-214ENST00000638487 GOLGA3Q08378 1498 aa20.32■□□□□ 0.84
MED17-214ENST00000638487 FANCD2Q9BXW9 1451 aa20.31■□□□□ 0.84
MED17-214ENST00000638487 ZEB1P37275 1124 aaPredicted RBP20.31■□□□□ 0.84
MED17-214ENST00000638487 CEP164Q9UPV0 1460 aa20.29■□□□□ 0.84
MED17-214ENST00000638487 CEP162Q5TB80 1403 aa20.29■□□□□ 0.84
MED17-214ENST00000638487 RAPGEF2Q9Y4G8 1499 aa20.25■□□□□ 0.83
MED17-214ENST00000638487 LAMC3Q9Y6N6 1575 aa20.24■□□□□ 0.83
MED17-214ENST00000638487 UBTFP17480 764 aaKnown RBP20.22■□□□□ 0.83
MED17-214ENST00000638487 PRXQ9BXM0 1461 aa20.21■□□□□ 0.83
MED17-214ENST00000638487 FGD5Q6ZNL6 1462 aa20.2■□□□□ 0.82
MED17-214ENST00000638487 KIF27Q86VH2 1401 aa20.18■□□□□ 0.82
MED17-214ENST00000638487 DNMBPQ6XZF7 1577 aa20.16■□□□□ 0.82
MED17-214ENST00000638487 TOPBP1Q92547 1522 aa20.14■□□□□ 0.81
MED17-214ENST00000638487 ERICH3Q5RHP9 1530 aa20.13■□□□□ 0.81
MED17-214ENST00000638487 TTBK1Q5TCY1 1321 aaPredicted RBP20.11■□□□□ 0.81
MED17-214ENST00000638487 CUX2O14529 1486 aa20.11■□□□□ 0.81
MED17-214ENST00000638487 URB2Q14146 1524 aaKnown RBP20.1■□□□□ 0.81
MED17-214ENST00000638487 DIEXFQ68CQ4 756 aaKnown RBP20.09■□□□□ 0.81
MED17-214ENST00000638487 POLA1P09884 1462 aaPredicted RBP20.08■□□□□ 0.8
MED17-214ENST00000638487 KIF21AQ7Z4S6 1674 aa20.07■□□□□ 0.8
MED17-214ENST00000638487 IGF1RP08069 1367 aa20.07■□□□□ 0.8
MED17-214ENST00000638487 RAD54L2Q9Y4B4 1467 aa20.05■□□□□ 0.8
MED17-214ENST00000638487 PDS5BQ9NTI5 1447 aa20.04■□□□□ 0.8
MED17-214ENST00000638487 CLIP1P30622 1438 aa20.04■□□□□ 0.8
MED17-214ENST00000638487 ABCA10Q8WWZ4 1543 aa20.01■□□□□ 0.79
MED17-214ENST00000638487 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP20■□□□□ 0.79
MED17-214ENST00000638487 WDR97A6NE52 1622 aa19.96■□□□□ 0.79
MED17-214ENST00000638487 ANP32EQ9BTT0 268 aa19.94■□□□□ 0.78
MED17-214ENST00000638487 CARMIL1Q5VZK9 1371 aa19.91■□□□□ 0.78
MED17-214ENST00000638487 VPS8Q8N3P4 1428 aa19.91■□□□□ 0.78
MED17-214ENST00000638487 RANGAP1P46060 587 aaPredicted RBP19.89■□□□□ 0.78
MED17-214ENST00000638487 CCER1Q8TC90 406 aaPredicted RBP19.89■□□□□ 0.77
MED17-214ENST00000638487 ARAP1Q96P48 1450 aa19.88■□□□□ 0.77
Retrieved 100 of 20,778 RNA–protein pairs in 52.9 ms