RNA–Protein interactions for RNA: ENST00000637124.1

LINC00598-212, long intergenic non-protein coding RNA 598, humanhuman

TSL 5 BASIC

Gene LINC00598, Length 905 nt, Biotype lincRNA, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00598-212ENST00000637124 NISCHQ9Y2I1 1504 aa18.45■□□□□ 0.54
LINC00598-212ENST00000637124 CHIC1Q5VXU3 224 aa18.45■□□□□ 0.54
LINC00598-212ENST00000637124 AEBP2Q6ZN18 517 aaPredicted RBP18.26■□□□□ 0.51
LINC00598-212ENST00000637124 ABCC9O60706 1549 aa16.54■□□□□ 0.24
LINC00598-212ENST00000637124 PHF23Q9BUL5 403 aaPredicted RBP16.42■□□□□ 0.22
LINC00598-212ENST00000637124 CCDC180Q9P1Z9 1646 aa16.34■□□□□ 0.21
LINC00598-212ENST00000637124 DNAJC5BQ9UF47 199 aa16■□□□□ 0.15
LINC00598-212ENST00000637124 SENP3Q9H4L4 574 aaPredicted RBP15.7■□□□□ 0.1
LINC00598-212ENST00000637124 RB1CC1Q8TDY2 1594 aa15.44■□□□□ 0.06
LINC00598-212ENST00000637124 ZCCHC6Q5VYS8 1495 aaKnown RBP15.43■□□□□ 0.06
LINC00598-212ENST00000637124 DCAF8L2P0C7V8 631 aa15.38■□□□□ 0.05
LINC00598-212ENST00000637124 NACADO15069 1562 aa15.32■□□□□ 0.04
LINC00598-212ENST00000637124 PLPPR3Q6T4P5 718 aa15.28■□□□□ 0.04
LINC00598-212ENST00000637124 MYO15BQ96JP2 1530 aa15.27■□□□□ 0.04
LINC00598-212ENST00000637124 UNC13AQ9UPW8 1703 aa15.27■□□□□ 0.04
LINC00598-212ENST00000637124 DCAF1Q9Y4B6 1507 aa15.27■□□□□ 0.03
LINC00598-212ENST00000637124 PABPN1Q86U42 306 aaKnown RBP eCLIP15.24■□□□□ 0.03
LINC00598-212ENST00000637124 DNAJC5Q9H3Z4 198 aa15.15■□□□□ 0.02
LINC00598-212ENST00000637124 BICRAQ9NZM4 1560 aa15□□□□□ -0.01
LINC00598-212ENST00000637124 SCRIBQ14160 1630 aa14.95□□□□□ -0.02
LINC00598-212ENST00000637124 CC2D2AQ9P2K1 1620 aa14.93□□□□□ -0.02
LINC00598-212ENST00000637124 CECR2Q9BXF3 1484 aa14.93□□□□□ -0.02
LINC00598-212ENST00000637124 SHROOM4Q9ULL8 1493 aa14.88□□□□□ -0.03
LINC00598-212ENST00000637124 EIF4G1Q04637 1599 aaKnown RBP14.7□□□□□ -0.06
LINC00598-212ENST00000637124 FOXD1Q16676 465 aa14.64□□□□□ -0.07
LINC00598-212ENST00000637124 ADRA2BP18089 450 aa14.47□□□□□ -0.09
LINC00598-212ENST00000637124 CUX2O14529 1486 aa14.46□□□□□ -0.09
LINC00598-212ENST00000637124 TRIM41Q8WV44 630 aa14.34□□□□□ -0.11
LINC00598-212ENST00000637124 ERCC6Q03468 1493 aa14.33□□□□□ -0.12
LINC00598-212ENST00000637124 EHMT2Q96KQ7 1210 aa14.32□□□□□ -0.12
LINC00598-212ENST00000637124 KCNA4P22459 653 aa14.31□□□□□ -0.12
LINC00598-212ENST00000637124 SUPT5HO00267 1087 aaKnown RBP14.3□□□□□ -0.12
LINC00598-212ENST00000637124 SMARCA4P51532 1647 aa14.3□□□□□ -0.12
LINC00598-212ENST00000637124 BAZ1AQ9NRL2 1556 aaPredicted RBP14.29□□□□□ -0.12
LINC00598-212ENST00000637124 POTEDQ86YR6 584 aa14.25□□□□□ -0.13
LINC00598-212ENST00000637124 PPP6R1Q9UPN7 881 aa14.24□□□□□ -0.13
LINC00598-212ENST00000637124 MROH2BQ7Z745 1585 aa14.24□□□□□ -0.13
LINC00598-212ENST00000637124 ATAD2BQ9ULI0 1458 aa14.18□□□□□ -0.14
LINC00598-212ENST00000637124 SMARCA2P51531 1590 aa14.15□□□□□ -0.14
LINC00598-212ENST00000637124 PEG3Q9GZU2 1588 aa14.15□□□□□ -0.14
LINC00598-212ENST00000637124 NCAPD3P42695 1498 aa14.12□□□□□ -0.15
LINC00598-212ENST00000637124 RSF1Q96T23 1441 aaPredicted RBP14.11□□□□□ -0.15
LINC00598-212ENST00000637124 HMGXB3Q12766 1538 aa14.1□□□□□ -0.15
LINC00598-212ENST00000637124 WIZO95785 1651 aa14.09□□□□□ -0.15
LINC00598-212ENST00000637124 BAZ1BQ9UIG0 1483 aaKnown RBP14.06□□□□□ -0.16
LINC00598-212ENST00000637124 THOC2Q8NI27 1593 aaKnown RBP14.05□□□□□ -0.16
LINC00598-212ENST00000637124 NESP48681 1621 aa14.01□□□□□ -0.17
LINC00598-212ENST00000637124 TOP2AP11388 1531 aaKnown RBP13.95□□□□□ -0.18
LINC00598-212ENST00000637124 KIF21AQ7Z4S6 1674 aa13.94□□□□□ -0.18
LINC00598-212ENST00000637124 MSH5O43196 834 aa13.92□□□□□ -0.18
LINC00598-212ENST00000637124 LAMC3Q9Y6N6 1575 aa13.79□□□□□ -0.2
LINC00598-212ENST00000637124 CSRNP3Q8WYN3 585 aa13.78□□□□□ -0.2
LINC00598-212ENST00000637124 CCDC88BA6NC98 1476 aa13.76□□□□□ -0.21
LINC00598-212ENST00000637124 CADPSQ9ULU8 1353 aa13.71□□□□□ -0.21
LINC00598-212ENST00000637124 RIMBP3CA6NJZ7 1639 aa13.71□□□□□ -0.22
LINC00598-212ENST00000637124 RIMBP3BA6NNM3 1639 aa13.71□□□□□ -0.22
LINC00598-212ENST00000637124 RIMBP3Q9UFD9 1639 aa13.71□□□□□ -0.22
LINC00598-212ENST00000637124 SLC4A1APQ9BWU0 796 aaKnown RBP13.7□□□□□ -0.22
LINC00598-212ENST00000637124 CFTRP13569 1480 aa13.68□□□□□ -0.22
LINC00598-212ENST00000637124 PDS5BQ9NTI5 1447 aa13.66□□□□□ -0.22
LINC00598-212ENST00000637124 MRC2Q9UBG0 1479 aa13.64□□□□□ -0.23
LINC00598-212ENST00000637124 PPP4R3CPQ6ZMV5 832 aa13.64□□□□□ -0.23
LINC00598-212ENST00000637124 OSCARQ8IYS5 282 aa13.64□□□□□ -0.23
LINC00598-212ENST00000637124 WDR62O43379 1518 aa13.64□□□□□ -0.23
LINC00598-212ENST00000637124 PIAS4Q8N2W9 510 aaPredicted RBP13.6□□□□□ -0.23
LINC00598-212ENST00000637124 PRDM2Q13029 1718 aa13.59□□□□□ -0.23
LINC00598-212ENST00000637124 FANCD2Q9BXW9 1451 aa13.58□□□□□ -0.24
LINC00598-212ENST00000637124 CEP164Q9UPV0 1460 aa13.55□□□□□ -0.24
LINC00598-212ENST00000637124 TRHP20396 242 aaPredicted RBP13.54□□□□□ -0.24
LINC00598-212ENST00000637124 ARHGEF11O15085 1522 aa13.52□□□□□ -0.25
LINC00598-212ENST00000637124 URB2Q14146 1524 aaKnown RBP13.44□□□□□ -0.26
LINC00598-212ENST00000637124 CYB5RLQ6IPT4 315 aa13.42□□□□□ -0.26
LINC00598-212ENST00000637124 NCBP3Q53F19 620 aaKnown RBP13.4□□□□□ -0.26
LINC00598-212ENST00000637124 TOPBP1Q92547 1522 aa13.39□□□□□ -0.27
LINC00598-212ENST00000637124 DNMBPQ6XZF7 1577 aa13.38□□□□□ -0.27
LINC00598-212ENST00000637124 CUX1P39880 1505 aa13.35□□□□□ -0.27
LINC00598-212ENST00000637124 NPM3O75607 178 aaKnown RBP13.35□□□□□ -0.27
LINC00598-212ENST00000637124 ABCC8Q09428 1581 aa13.35□□□□□ -0.27
LINC00598-212ENST00000637124 CHD1O14646 1710 aa13.35□□□□□ -0.27
LINC00598-212ENST00000637124 ARAP1Q96P48 1450 aa13.33□□□□□ -0.28
LINC00598-212ENST00000637124 WRNQ14191 1432 aaPredicted RBP eCLIP13.3□□□□□ -0.28
LINC00598-212ENST00000637124 POLA1P09884 1462 aaPredicted RBP13.29□□□□□ -0.28
LINC00598-212ENST00000637124 SYNJ1O43426 1573 aa13.28□□□□□ -0.28
LINC00598-212ENST00000637124 FGD5Q6ZNL6 1462 aa13.28□□□□□ -0.28
LINC00598-212ENST00000637124 ZNF608Q9ULD9 1512 aaPredicted RBP13.27□□□□□ -0.29
LINC00598-212ENST00000637124 BIVM-ERCC5R4GMW8 1640 aa13.27□□□□□ -0.29
LINC00598-212ENST00000637124 TOP2BQ02880 1626 aa13.26□□□□□ -0.29
LINC00598-212ENST00000637124 IFT140Q96RY7 1462 aa13.25□□□□□ -0.29
LINC00598-212ENST00000637124 EIF4G3O43432 1585 aaKnown RBP13.24□□□□□ -0.29
LINC00598-212ENST00000637124 FAM9AQ8IZU1 332 aaPredicted RBP13.24□□□□□ -0.29
LINC00598-212ENST00000637124 TARBP1Q13395 1621 aaKnown RBP13.24□□□□□ -0.29
LINC00598-212ENST00000637124 ZBTB22O15209 634 aa13.23□□□□□ -0.29
LINC00598-212ENST00000637124 RAD54L2Q9Y4B4 1467 aa13.23□□□□□ -0.29
LINC00598-212ENST00000637124 SOGA1O94964 1423 aa13.2□□□□□ -0.3
LINC00598-212ENST00000637124 WDR97A6NE52 1622 aa13.18□□□□□ -0.3
LINC00598-212ENST00000637124 ABCA10Q8WWZ4 1543 aa13.14□□□□□ -0.31
LINC00598-212ENST00000637124 ILDR1Q86SU0 546 aaPredicted RBP13.14□□□□□ -0.31
LINC00598-212ENST00000637124 AQRO60306 1485 aaKnown RBP eCLIP13.12□□□□□ -0.31
LINC00598-212ENST00000637124 FBLN2P98095 1184 aa13.12□□□□□ -0.31
LINC00598-212ENST00000637124 TDRD9Q8NDG6 1382 aaKnown RBP13.11□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 33.8 ms