RNA–Protein interactions for RNA: ENST00000637117.1

CACNA1A-236, Transcript of calcium voltage-gated channel subunit alpha1 A, humanhuman

TSL 5

Gene CACNA1A, Length 1,124 nt, Biotype retained intron.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1A-236ENST00000637117 CHIC1Q5VXU3 224 aa25.38■■□□□ 1.65
CACNA1A-236ENST00000637117 AEBP2Q6ZN18 517 aaPredicted RBP25.32■■□□□ 1.64
CACNA1A-236ENST00000637117 NISCHQ9Y2I1 1504 aa23.19■■□□□ 1.3
CACNA1A-236ENST00000637117 PHF23Q9BUL5 403 aaPredicted RBP22.39■■□□□ 1.17
CACNA1A-236ENST00000637117 SENP3Q9H4L4 574 aaPredicted RBP21.37■■□□□ 1.01
CACNA1A-236ENST00000637117 ABCC9O60706 1549 aa21.2■□□□□ 0.98
CACNA1A-236ENST00000637117 PLPPR3Q6T4P5 718 aa20.91■□□□□ 0.94
CACNA1A-236ENST00000637117 CCDC180Q9P1Z9 1646 aa20.85■□□□□ 0.93
CACNA1A-236ENST00000637117 DNAJC5BQ9UF47 199 aa20.2■□□□□ 0.82
CACNA1A-236ENST00000637117 RB1CC1Q8TDY2 1594 aa20.02■□□□□ 0.8
CACNA1A-236ENST00000637117 NACADO15069 1562 aa19.83■□□□□ 0.77
CACNA1A-236ENST00000637117 DCAF8L2P0C7V8 631 aa19.83■□□□□ 0.77
CACNA1A-236ENST00000637117 PABPN1Q86U42 306 aaKnown RBP eCLIP19.77■□□□□ 0.76
CACNA1A-236ENST00000637117 FOXD1Q16676 465 aa19.75■□□□□ 0.75
CACNA1A-236ENST00000637117 ADRA2BP18089 450 aa19.58■□□□□ 0.72
CACNA1A-236ENST00000637117 PPP6R1Q9UPN7 881 aa19.53■□□□□ 0.72
CACNA1A-236ENST00000637117 UNC13AQ9UPW8 1703 aa19.53■□□□□ 0.72
CACNA1A-236ENST00000637117 MYO15BQ96JP2 1530 aa19.46■□□□□ 0.71
CACNA1A-236ENST00000637117 BICRAQ9NZM4 1560 aa19.44■□□□□ 0.7
CACNA1A-236ENST00000637117 ZCCHC6Q5VYS8 1495 aaKnown RBP19.13■□□□□ 0.65
CACNA1A-236ENST00000637117 CECR2Q9BXF3 1484 aa19.13■□□□□ 0.65
CACNA1A-236ENST00000637117 SHROOM4Q9ULL8 1493 aa19.13■□□□□ 0.65
CACNA1A-236ENST00000637117 DCAF1Q9Y4B6 1507 aa19.12■□□□□ 0.65
CACNA1A-236ENST00000637117 CC2D2AQ9P2K1 1620 aa19.11■□□□□ 0.65
CACNA1A-236ENST00000637117 SCRIBQ14160 1630 aa19.02■□□□□ 0.64
CACNA1A-236ENST00000637117 EIF4G1Q04637 1599 aaKnown RBP18.99■□□□□ 0.63
CACNA1A-236ENST00000637117 KCNA4P22459 653 aa18.88■□□□□ 0.61
CACNA1A-236ENST00000637117 PIAS4Q8N2W9 510 aaPredicted RBP18.82■□□□□ 0.6
CACNA1A-236ENST00000637117 DNAJC5Q9H3Z4 198 aa18.74■□□□□ 0.59
CACNA1A-236ENST00000637117 PPP4R3CPQ6ZMV5 832 aa18.51■□□□□ 0.55
CACNA1A-236ENST00000637117 EHMT2Q96KQ7 1210 aa18.4■□□□□ 0.54
CACNA1A-236ENST00000637117 CUX2O14529 1486 aa18.36■□□□□ 0.53
CACNA1A-236ENST00000637117 NCAPD3P42695 1498 aa18.34■□□□□ 0.53
CACNA1A-236ENST00000637117 ERCC6Q03468 1493 aa18.33■□□□□ 0.52
CACNA1A-236ENST00000637117 ATAD2BQ9ULI0 1458 aa18.24■□□□□ 0.51
CACNA1A-236ENST00000637117 NCBP3Q53F19 620 aaKnown RBP18.22■□□□□ 0.51
CACNA1A-236ENST00000637117 SMARCA2P51531 1590 aa18.15■□□□□ 0.5
CACNA1A-236ENST00000637117 NESP48681 1621 aa18.13■□□□□ 0.49
CACNA1A-236ENST00000637117 HMGXB3Q12766 1538 aa18.12■□□□□ 0.49
CACNA1A-236ENST00000637117 SMARCA4P51532 1647 aa18.11■□□□□ 0.49
CACNA1A-236ENST00000637117 SLC4A1APQ9BWU0 796 aaKnown RBP18.1■□□□□ 0.49
CACNA1A-236ENST00000637117 BAZ1BQ9UIG0 1483 aaKnown RBP18.03■□□□□ 0.48
CACNA1A-236ENST00000637117 BAZ1AQ9NRL2 1556 aaPredicted RBP18■□□□□ 0.47
CACNA1A-236ENST00000637117 NPM3O75607 178 aaKnown RBP17.97■□□□□ 0.47
CACNA1A-236ENST00000637117 MSH5O43196 834 aa17.94■□□□□ 0.46
CACNA1A-236ENST00000637117 THOC2Q8NI27 1593 aaKnown RBP17.93■□□□□ 0.46
CACNA1A-236ENST00000637117 PEG3Q9GZU2 1588 aa17.93■□□□□ 0.46
CACNA1A-236ENST00000637117 LAMC3Q9Y6N6 1575 aa17.93■□□□□ 0.46
CACNA1A-236ENST00000637117 PDS5BQ9NTI5 1447 aa17.89■□□□□ 0.46
CACNA1A-236ENST00000637117 SCAF1Q9H7N4 1312 aaKnown RBP17.87■□□□□ 0.45
CACNA1A-236ENST00000637117 MROH2BQ7Z745 1585 aa17.87■□□□□ 0.45
CACNA1A-236ENST00000637117 CNKSR2Q8WXI2 1034 aa17.84■□□□□ 0.45
CACNA1A-236ENST00000637117 KIF21AQ7Z4S6 1674 aa17.83■□□□□ 0.44
CACNA1A-236ENST00000637117 CSRNP3Q8WYN3 585 aa17.82■□□□□ 0.44
CACNA1A-236ENST00000637117 TRIM41Q8WV44 630 aa17.81■□□□□ 0.44
CACNA1A-236ENST00000637117 CADPSQ9ULU8 1353 aa17.79■□□□□ 0.44
CACNA1A-236ENST00000637117 MRC2Q9UBG0 1479 aa17.71■□□□□ 0.43
CACNA1A-236ENST00000637117 WDR62O43379 1518 aa17.66■□□□□ 0.42
CACNA1A-236ENST00000637117 WIZO95785 1651 aa17.63■□□□□ 0.41
CACNA1A-236ENST00000637117 CEP164Q9UPV0 1460 aa17.59■□□□□ 0.41
CACNA1A-236ENST00000637117 OSCARQ8IYS5 282 aa17.58■□□□□ 0.4
CACNA1A-236ENST00000637117 FANCD2Q9BXW9 1451 aa17.56■□□□□ 0.4
CACNA1A-236ENST00000637117 MAPK8IP2Q13387 824 aaPredicted RBP17.53■□□□□ 0.4
CACNA1A-236ENST00000637117 CFTRP13569 1480 aa17.5■□□□□ 0.39
CACNA1A-236ENST00000637117 URB2Q14146 1524 aaKnown RBP17.42■□□□□ 0.38
CACNA1A-236ENST00000637117 RSF1Q96T23 1441 aaPredicted RBP17.42■□□□□ 0.38
CACNA1A-236ENST00000637117 ZBTB22O15209 634 aa17.39■□□□□ 0.37
CACNA1A-236ENST00000637117 TOP2AP11388 1531 aaKnown RBP17.37■□□□□ 0.37
CACNA1A-236ENST00000637117 RNF216Q9NWF9 866 aaPredicted RBP17.32■□□□□ 0.36
CACNA1A-236ENST00000637117 ZNF608Q9ULD9 1512 aaPredicted RBP17.26■□□□□ 0.35
CACNA1A-236ENST00000637117 IFT140Q96RY7 1462 aa17.26■□□□□ 0.35
CACNA1A-236ENST00000637117 RIMBP3CA6NJZ7 1639 aa17.26■□□□□ 0.35
CACNA1A-236ENST00000637117 RIMBP3BA6NNM3 1639 aa17.26■□□□□ 0.35
CACNA1A-236ENST00000637117 RIMBP3Q9UFD9 1639 aa17.26■□□□□ 0.35
CACNA1A-236ENST00000637117 CCDC88BA6NC98 1476 aa17.24■□□□□ 0.35
CACNA1A-236ENST00000637117 PRDM2Q13029 1718 aa17.21■□□□□ 0.35
CACNA1A-236ENST00000637117 CYB5RLQ6IPT4 315 aa17.19■□□□□ 0.34
CACNA1A-236ENST00000637117 ARHGEF11O15085 1522 aa17.19■□□□□ 0.34
CACNA1A-236ENST00000637117 TOPBP1Q92547 1522 aa17.19■□□□□ 0.34
CACNA1A-236ENST00000637117 FOXD4L1Q9NU39 408 aa17.18■□□□□ 0.34
CACNA1A-236ENST00000637117 DMRT2Q9Y5R5 561 aa17.17■□□□□ 0.34
CACNA1A-236ENST00000637117 ABCC8Q09428 1581 aa17.15■□□□□ 0.34
CACNA1A-236ENST00000637117 AQRO60306 1485 aaKnown RBP eCLIP17.11■□□□□ 0.33
CACNA1A-236ENST00000637117 FBLN2P98095 1184 aa17.1■□□□□ 0.33
CACNA1A-236ENST00000637117 EIF4G3O43432 1585 aaKnown RBP17.1■□□□□ 0.33
CACNA1A-236ENST00000637117 TRHP20396 242 aaPredicted RBP17.09■□□□□ 0.33
CACNA1A-236ENST00000637117 DNMBPQ6XZF7 1577 aa17.08■□□□□ 0.32
CACNA1A-236ENST00000637117 HOXD11P31277 338 aaPredicted RBP17.07■□□□□ 0.32
CACNA1A-236ENST00000637117 TARBP1Q13395 1621 aaKnown RBP17.03■□□□□ 0.32
CACNA1A-236ENST00000637117 CHD1O14646 1710 aa17.02■□□□□ 0.32
CACNA1A-236ENST00000637117 ARAP1Q96P48 1450 aa17.01■□□□□ 0.31
CACNA1A-236ENST00000637117 POLA1P09884 1462 aaPredicted RBP16.99■□□□□ 0.31
CACNA1A-236ENST00000637117 TDRD9Q8NDG6 1382 aaKnown RBP16.98■□□□□ 0.31
CACNA1A-236ENST00000637117 SOGA1O94964 1423 aa16.97■□□□□ 0.31
CACNA1A-236ENST00000637117 RAD54L2Q9Y4B4 1467 aa16.97■□□□□ 0.31
CACNA1A-236ENST00000637117 CHMP7Q8WUX9 453 aaPredicted RBP16.93■□□□□ 0.3
CACNA1A-236ENST00000637117 SNAPC4Q5SXM2 1469 aa16.88■□□□□ 0.29
CACNA1A-236ENST00000637117 FGD5Q6ZNL6 1462 aa16.86■□□□□ 0.29
CACNA1A-236ENST00000637117 CLASP1Q7Z460 1538 aa16.84■□□□□ 0.29
CACNA1A-236ENST00000637117 WDR97A6NE52 1622 aa16.82■□□□□ 0.28
Retrieved 100 of 20,778 RNA–protein pairs in 54 ms