RNA–Protein interactions for RNA: ENST00000636974.1

CACNA1A-233, Transcript of calcium voltage-gated channel subunit alpha1 A, humanhuman

TSL 5

Gene CACNA1A, Length 1,783 nt, Biotype retained intron.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1A-233ENST00000636974 NISCHQ9Y2I1 1504 aa17.07■□□□□ 0.32
CACNA1A-233ENST00000636974 CHIC1Q5VXU3 224 aa15.69■□□□□ 0.1
CACNA1A-233ENST00000636974 AEBP2Q6ZN18 517 aaPredicted RBP14.87□□□□□ -0.03
CACNA1A-233ENST00000636974 CCDC180Q9P1Z9 1646 aa14.69□□□□□ -0.06
CACNA1A-233ENST00000636974 ZCCHC6Q5VYS8 1495 aaKnown RBP14.45□□□□□ -0.1
CACNA1A-233ENST00000636974 DCAF1Q9Y4B6 1507 aa14.2□□□□□ -0.14
CACNA1A-233ENST00000636974 SHROOM4Q9ULL8 1493 aa14.13□□□□□ -0.15
CACNA1A-233ENST00000636974 SLC24A1O60721 1099 aa14.01□□□□□ -0.17
CACNA1A-233ENST00000636974 PHF23Q9BUL5 403 aaPredicted RBP14.01□□□□□ -0.17
CACNA1A-233ENST00000636974 EHMT2Q96KQ7 1210 aa13.9□□□□□ -0.18
CACNA1A-233ENST00000636974 MYO15BQ96JP2 1530 aa13.88□□□□□ -0.19
CACNA1A-233ENST00000636974 SUPT5HO00267 1087 aaKnown RBP13.86□□□□□ -0.19
CACNA1A-233ENST00000636974 DCAF8L2P0C7V8 631 aa13.83□□□□□ -0.19
CACNA1A-233ENST00000636974 ABCC9O60706 1549 aa13.61□□□□□ -0.23
CACNA1A-233ENST00000636974 NACADO15069 1562 aa13.59□□□□□ -0.23
CACNA1A-233ENST00000636974 SCRIBQ14160 1630 aa13.48□□□□□ -0.25
CACNA1A-233ENST00000636974 RSF1Q96T23 1441 aaPredicted RBP13.41□□□□□ -0.26
CACNA1A-233ENST00000636974 RB1CC1Q8TDY2 1594 aa13.34□□□□□ -0.27
CACNA1A-233ENST00000636974 PLPPR3Q6T4P5 718 aa13.27□□□□□ -0.28
CACNA1A-233ENST00000636974 BAZ1AQ9NRL2 1556 aaPredicted RBP13.17□□□□□ -0.3
CACNA1A-233ENST00000636974 MROH2BQ7Z745 1585 aa13.16□□□□□ -0.3
CACNA1A-233ENST00000636974 CECR2Q9BXF3 1484 aa13.16□□□□□ -0.3
CACNA1A-233ENST00000636974 KCNA4P22459 653 aa13.15□□□□□ -0.3
CACNA1A-233ENST00000636974 CSRNP3Q8WYN3 585 aa13.1□□□□□ -0.31
CACNA1A-233ENST00000636974 TRIM41Q8WV44 630 aa13.06□□□□□ -0.32
CACNA1A-233ENST00000636974 RTN4Q9NQC3 1192 aaKnown RBP13.05□□□□□ -0.32
CACNA1A-233ENST00000636974 WIZO95785 1651 aa13.04□□□□□ -0.32
CACNA1A-233ENST00000636974 TOP2AP11388 1531 aaKnown RBP13.01□□□□□ -0.33
CACNA1A-233ENST00000636974 SMARCA4P51532 1647 aa13□□□□□ -0.33
CACNA1A-233ENST00000636974 HRCP23327 699 aa12.99□□□□□ -0.33
CACNA1A-233ENST00000636974 LOC105371045A0A1W2PR82 267 aa12.98□□□□□ -0.33
CACNA1A-233ENST00000636974 UNC13AQ9UPW8 1703 aa12.96□□□□□ -0.33
CACNA1A-233ENST00000636974 EIF4G1Q04637 1599 aaKnown RBP12.96□□□□□ -0.34
CACNA1A-233ENST00000636974 PCGF6Q9BYE7 350 aa12.92□□□□□ -0.34
CACNA1A-233ENST00000636974 AMER1Q5JTC6 1135 aaPredicted RBP12.92□□□□□ -0.34
CACNA1A-233ENST00000636974 TRIM26Q12899 539 aaPredicted RBP12.89□□□□□ -0.35
CACNA1A-233ENST00000636974 PEG3Q9GZU2 1588 aa12.89□□□□□ -0.35
CACNA1A-233ENST00000636974 BICRAQ9NZM4 1560 aa12.87□□□□□ -0.35
CACNA1A-233ENST00000636974 SMARCA2P51531 1590 aa12.86□□□□□ -0.35
CACNA1A-233ENST00000636974 CCDC88BA6NC98 1476 aa12.85□□□□□ -0.35
CACNA1A-233ENST00000636974 EEA1Q15075 1411 aa12.78□□□□□ -0.36
CACNA1A-233ENST00000636974 FAM9AQ8IZU1 332 aaPredicted RBP12.74□□□□□ -0.37
CACNA1A-233ENST00000636974 ZEB1P37275 1124 aaPredicted RBP12.7□□□□□ -0.38
CACNA1A-233ENST00000636974 SLC4A1APQ9BWU0 796 aaKnown RBP12.7□□□□□ -0.38
CACNA1A-233ENST00000636974 ATAD2BQ9ULI0 1458 aa12.69□□□□□ -0.38
CACNA1A-233ENST00000636974 PABPN1Q86U42 306 aaKnown RBP eCLIP12.69□□□□□ -0.38
CACNA1A-233ENST00000636974 ABCC8Q09428 1581 aa12.68□□□□□ -0.38
CACNA1A-233ENST00000636974 BAZ1BQ9UIG0 1483 aaKnown RBP12.65□□□□□ -0.38
CACNA1A-233ENST00000636974 WRNQ14191 1432 aaPredicted RBP eCLIP12.64□□□□□ -0.39
CACNA1A-233ENST00000636974 TNIKQ9UKE5 1360 aa12.62□□□□□ -0.39
CACNA1A-233ENST00000636974 HMGXB3Q12766 1538 aa12.57□□□□□ -0.4
CACNA1A-233ENST00000636974 GOLGA3Q08378 1498 aa12.56□□□□□ -0.4
CACNA1A-233ENST00000636974 SOGA1O94964 1423 aa12.56□□□□□ -0.4
CACNA1A-233ENST00000636974 NCBP3Q53F19 620 aaKnown RBP12.55□□□□□ -0.4
CACNA1A-233ENST00000636974 CEP162Q5TB80 1403 aa12.55□□□□□ -0.4
CACNA1A-233ENST00000636974 NCAPD3P42695 1498 aa12.54□□□□□ -0.4
CACNA1A-233ENST00000636974 CEP164Q9UPV0 1460 aa12.52□□□□□ -0.41
CACNA1A-233ENST00000636974 ADRA2BP18089 450 aa12.51□□□□□ -0.41
CACNA1A-233ENST00000636974 KIF21BO75037 1637 aa12.51□□□□□ -0.41
CACNA1A-233ENST00000636974 SYNJ1O43426 1573 aa12.5□□□□□ -0.41
CACNA1A-233ENST00000636974 SENP3Q9H4L4 574 aaPredicted RBP12.48□□□□□ -0.41
CACNA1A-233ENST00000636974 PPARGC1BQ86YN6 1023 aaKnown RBP12.48□□□□□ -0.41
CACNA1A-233ENST00000636974 TOP2BQ02880 1626 aa12.47□□□□□ -0.41
CACNA1A-233ENST00000636974 RUSC2Q8N2Y8 1516 aa12.44□□□□□ -0.42
CACNA1A-233ENST00000636974 BIVM-ERCC5R4GMW8 1640 aa12.43□□□□□ -0.42
CACNA1A-233ENST00000636974 UBTFP17480 764 aaKnown RBP12.42□□□□□ -0.42
CACNA1A-233ENST00000636974 CFTRP13569 1480 aa12.38□□□□□ -0.43
CACNA1A-233ENST00000636974 ERICH3Q5RHP9 1530 aa12.37□□□□□ -0.43
CACNA1A-233ENST00000636974 CLIP1P30622 1438 aa12.35□□□□□ -0.43
CACNA1A-233ENST00000636974 VPS8Q8N3P4 1428 aa12.33□□□□□ -0.44
CACNA1A-233ENST00000636974 PRXQ9BXM0 1461 aa12.31□□□□□ -0.44
CACNA1A-233ENST00000636974 RAPGEF2Q9Y4G8 1499 aa12.31□□□□□ -0.44
CACNA1A-233ENST00000636974 KIF27Q86VH2 1401 aa12.29□□□□□ -0.44
CACNA1A-233ENST00000636974 PRDM2Q13029 1718 aa12.29□□□□□ -0.44
CACNA1A-233ENST00000636974 CUX1P39880 1505 aa12.28□□□□□ -0.44
CACNA1A-233ENST00000636974 CCER1Q8TC90 406 aaPredicted RBP12.27□□□□□ -0.45
CACNA1A-233ENST00000636974 DAXXQ9UER7 740 aaPredicted RBP12.25□□□□□ -0.45
CACNA1A-233ENST00000636974 CADPSQ9ULU8 1353 aa12.24□□□□□ -0.45
CACNA1A-233ENST00000636974 APLP2Q06481 763 aa12.23□□□□□ -0.45
CACNA1A-233ENST00000636974 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP12.2□□□□□ -0.46
CACNA1A-233ENST00000636974 PRKCSHP14314 528 aaPredicted RBP12.18□□□□□ -0.46
CACNA1A-233ENST00000636974 ZBTB22O15209 634 aa12.17□□□□□ -0.46
CACNA1A-233ENST00000636974 CC2D2AQ9P2K1 1620 aa12.14□□□□□ -0.47
CACNA1A-233ENST00000636974 ARAP1Q96P48 1450 aa12.14□□□□□ -0.47
CACNA1A-233ENST00000636974 CUX2O14529 1486 aa12.1□□□□□ -0.47
CACNA1A-233ENST00000636974 IGF1RP08069 1367 aa12.1□□□□□ -0.47
CACNA1A-233ENST00000636974 TTBK1Q5TCY1 1321 aaPredicted RBP12.09□□□□□ -0.47
CACNA1A-233ENST00000636974 FGD5Q6ZNL6 1462 aa12.09□□□□□ -0.47
CACNA1A-233ENST00000636974 CLSPNQ9HAW4 1339 aa12.09□□□□□ -0.47
CACNA1A-233ENST00000636974 MAP3K1Q13233 1512 aa12.08□□□□□ -0.48
CACNA1A-233ENST00000636974 FANCD2Q9BXW9 1451 aa12.08□□□□□ -0.48
CACNA1A-233ENST00000636974 DNMBPQ6XZF7 1577 aa12.07□□□□□ -0.48
CACNA1A-233ENST00000636974 ARHGAP35Q9NRY4 1499 aa12.06□□□□□ -0.48
CACNA1A-233ENST00000636974 RRBP1Q9P2E9 1410 aaKnown RBP12.05□□□□□ -0.48
CACNA1A-233ENST00000636974 CARMIL1Q5VZK9 1371 aa12.05□□□□□ -0.48
CACNA1A-233ENST00000636974 ABCA10Q8WWZ4 1543 aa12.04□□□□□ -0.48
CACNA1A-233ENST00000636974 LAMC3Q9Y6N6 1575 aa12.03□□□□□ -0.48
CACNA1A-233ENST00000636974 FHAD1B1AJZ9 1412 aa12.01□□□□□ -0.49
CACNA1A-233ENST00000636974 HNRNPUL2Q1KMD3 747 aaKnown RBP12□□□□□ -0.49
CACNA1A-233ENST00000636974 TOPBP1Q92547 1522 aa11.99□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 41.3 ms