RNA–Protein interactions for RNA: ENST00000632964.1

PHACTR4-207, Transcript of phosphatase and actin regulator 4, humanhuman

TSL 2

Gene PHACTR4, Length 1,853 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHACTR4-207ENST00000632964 POTEDQ86YR6 584 aa15.54■□□□□ 0.08
PHACTR4-207ENST00000632964 NISCHQ9Y2I1 1504 aa12.36□□□□□ -0.43
PHACTR4-207ENST00000632964 AEBP2Q6ZN18 517 aaPredicted RBP12.12□□□□□ -0.47
PHACTR4-207ENST00000632964 POTEHQ6S545 545 aa11.55□□□□□ -0.56
PHACTR4-207ENST00000632964 CHIC1Q5VXU3 224 aa11.54□□□□□ -0.56
PHACTR4-207ENST00000632964 PLSCR2Q9NRY7 297 aa10.97□□□□□ -0.65
PHACTR4-207ENST00000632964 CACNB1Q02641 598 aaPredicted RBP10.77□□□□□ -0.69
PHACTR4-207ENST00000632964 CCDC180Q9P1Z9 1646 aa10.65□□□□□ -0.7
PHACTR4-207ENST00000632964 SENP3Q9H4L4 574 aaPredicted RBP10.51□□□□□ -0.73
PHACTR4-207ENST00000632964 ZCCHC6Q5VYS8 1495 aaKnown RBP10.4□□□□□ -0.74
PHACTR4-207ENST00000632964 SHROOM4Q9ULL8 1493 aa10.32□□□□□ -0.76
PHACTR4-207ENST00000632964 MSH5O43196 834 aa10.3□□□□□ -0.76
PHACTR4-207ENST00000632964 PHF23Q9BUL5 403 aaPredicted RBP10.26□□□□□ -0.77
PHACTR4-207ENST00000632964 DCAF8L2P0C7V8 631 aa10.25□□□□□ -0.77
PHACTR4-207ENST00000632964 DCAF1Q9Y4B6 1507 aa10.18□□□□□ -0.78
PHACTR4-207ENST00000632964 SUPT5HO00267 1087 aaKnown RBP10.06□□□□□ -0.8
PHACTR4-207ENST00000632964 MYO15BQ96JP2 1530 aa9.97□□□□□ -0.81
PHACTR4-207ENST00000632964 ABCC9O60706 1549 aa9.93□□□□□ -0.82
PHACTR4-207ENST00000632964 NACADO15069 1562 aa9.88□□□□□ -0.83
PHACTR4-207ENST00000632964 SCRIBQ14160 1630 aa9.88□□□□□ -0.83
PHACTR4-207ENST00000632964 FOXD1Q16676 465 aa9.79□□□□□ -0.84
PHACTR4-207ENST00000632964 RB1CC1Q8TDY2 1594 aa9.75□□□□□ -0.85
PHACTR4-207ENST00000632964 RSF1Q96T23 1441 aaPredicted RBP9.69□□□□□ -0.86
PHACTR4-207ENST00000632964 CECR2Q9BXF3 1484 aa9.6□□□□□ -0.87
PHACTR4-207ENST00000632964 UNC13AQ9UPW8 1703 aa9.58□□□□□ -0.88
PHACTR4-207ENST00000632964 MROH2BQ7Z745 1585 aa9.56□□□□□ -0.88
PHACTR4-207ENST00000632964 BAZ1AQ9NRL2 1556 aaPredicted RBP9.52□□□□□ -0.88
PHACTR4-207ENST00000632964 WIZO95785 1651 aa9.51□□□□□ -0.89
PHACTR4-207ENST00000632964 SMARCA4P51532 1647 aa9.45□□□□□ -0.9
PHACTR4-207ENST00000632964 BICRAQ9NZM4 1560 aa9.44□□□□□ -0.9
PHACTR4-207ENST00000632964 PABPN1Q86U42 306 aaKnown RBP eCLIP9.44□□□□□ -0.9
PHACTR4-207ENST00000632964 TRIM41Q8WV44 630 aa9.42□□□□□ -0.9
PHACTR4-207ENST00000632964 TOP2AP11388 1531 aaKnown RBP9.39□□□□□ -0.91
PHACTR4-207ENST00000632964 LOC105371045A0A1W2PR82 267 aa9.37□□□□□ -0.91
PHACTR4-207ENST00000632964 CCDC88BA6NC98 1476 aa9.32□□□□□ -0.92
PHACTR4-207ENST00000632964 SMARCA2P51531 1590 aa9.31□□□□□ -0.92
PHACTR4-207ENST00000632964 EIF4G1Q04637 1599 aaKnown RBP9.3□□□□□ -0.92
PHACTR4-207ENST00000632964 PEG3Q9GZU2 1588 aa9.3□□□□□ -0.92
PHACTR4-207ENST00000632964 FAM9AQ8IZU1 332 aaPredicted RBP9.28□□□□□ -0.92
PHACTR4-207ENST00000632964 SP7Q8TDD2 431 aaPredicted RBP9.28□□□□□ -0.92
PHACTR4-207ENST00000632964 ATAD2BQ9ULI0 1458 aa9.24□□□□□ -0.93
PHACTR4-207ENST00000632964 BAZ1BQ9UIG0 1483 aaKnown RBP9.22□□□□□ -0.93
PHACTR4-207ENST00000632964 PLPPR3Q6T4P5 718 aa9.22□□□□□ -0.93
PHACTR4-207ENST00000632964 ABCC8Q09428 1581 aa9.21□□□□□ -0.93
PHACTR4-207ENST00000632964 PCGF6Q9BYE7 350 aa9.2□□□□□ -0.94
PHACTR4-207ENST00000632964 EHMT2Q96KQ7 1210 aa9.17□□□□□ -0.94
PHACTR4-207ENST00000632964 WRNQ14191 1432 aaPredicted RBP eCLIP9.12□□□□□ -0.95
PHACTR4-207ENST00000632964 TRIM26Q12899 539 aaPredicted RBP9.12□□□□□ -0.95
PHACTR4-207ENST00000632964 NCAPD3P42695 1498 aa9.12□□□□□ -0.95
PHACTR4-207ENST00000632964 HMGXB3Q12766 1538 aa9.11□□□□□ -0.95
PHACTR4-207ENST00000632964 EEA1Q15075 1411 aa9.1□□□□□ -0.95
PHACTR4-207ENST00000632964 HRCP23327 699 aa9.09□□□□□ -0.95
PHACTR4-207ENST00000632964 SOGA1O94964 1423 aa9.09□□□□□ -0.95
PHACTR4-207ENST00000632964 PIAS4Q8N2W9 510 aaPredicted RBP9.08□□□□□ -0.96
PHACTR4-207ENST00000632964 CSRNP3Q8WYN3 585 aa9.06□□□□□ -0.96
PHACTR4-207ENST00000632964 SYNJ1O43426 1573 aa9.06□□□□□ -0.96
PHACTR4-207ENST00000632964 RUSC2Q8N2Y8 1516 aa9.04□□□□□ -0.96
PHACTR4-207ENST00000632964 TNIKQ9UKE5 1360 aa9□□□□□ -0.97
PHACTR4-207ENST00000632964 UBTFP17480 764 aaKnown RBP9□□□□□ -0.97
PHACTR4-207ENST00000632964 TOP2BQ02880 1626 aa9□□□□□ -0.97
PHACTR4-207ENST00000632964 GOLGA3Q08378 1498 aa8.99□□□□□ -0.97
PHACTR4-207ENST00000632964 CEP162Q5TB80 1403 aa8.99□□□□□ -0.97
PHACTR4-207ENST00000632964 CFTRP13569 1480 aa8.98□□□□□ -0.97
PHACTR4-207ENST00000632964 BIVM-ERCC5R4GMW8 1640 aa8.98□□□□□ -0.97
PHACTR4-207ENST00000632964 CC2D2AQ9P2K1 1620 aa8.97□□□□□ -0.97
PHACTR4-207ENST00000632964 CEP164Q9UPV0 1460 aa8.97□□□□□ -0.97
PHACTR4-207ENST00000632964 KIF21BO75037 1637 aa8.96□□□□□ -0.98
PHACTR4-207ENST00000632964 PRDM2Q13029 1718 aa8.95□□□□□ -0.98
PHACTR4-207ENST00000632964 PPARGC1BQ86YN6 1023 aaKnown RBP8.94□□□□□ -0.98
PHACTR4-207ENST00000632964 CUX1P39880 1505 aa8.93□□□□□ -0.98
PHACTR4-207ENST00000632964 PPP6R1Q9UPN7 881 aa8.92□□□□□ -0.98
PHACTR4-207ENST00000632964 CADPSQ9ULU8 1353 aa8.92□□□□□ -0.98
PHACTR4-207ENST00000632964 ADRA2BP18089 450 aa8.91□□□□□ -0.98
PHACTR4-207ENST00000632964 RAPGEF2Q9Y4G8 1499 aa8.89□□□□□ -0.99
PHACTR4-207ENST00000632964 ZEB1P37275 1124 aaPredicted RBP8.87□□□□□ -0.99
PHACTR4-207ENST00000632964 CLIP1P30622 1438 aa8.87□□□□□ -0.99
PHACTR4-207ENST00000632964 KIF27Q86VH2 1401 aa8.87□□□□□ -0.99
PHACTR4-207ENST00000632964 ERICH3Q5RHP9 1530 aa8.85□□□□□ -0.99
PHACTR4-207ENST00000632964 PRXQ9BXM0 1461 aa8.84□□□□□ -0.99
PHACTR4-207ENST00000632964 TTBK1Q5TCY1 1321 aaPredicted RBP8.83□□□□□ -1
PHACTR4-207ENST00000632964 FANCD2Q9BXW9 1451 aa8.83□□□□□ -1
PHACTR4-207ENST00000632964 RANGAP1P46060 587 aaPredicted RBP8.82□□□□□ -1
PHACTR4-207ENST00000632964 VPS8Q8N3P4 1428 aa8.81□□□□□ -1
PHACTR4-207ENST00000632964 FGD5Q6ZNL6 1462 aa8.81□□□□□ -1
PHACTR4-207ENST00000632964 CUX2O14529 1486 aa8.8□□□□□ -1
PHACTR4-207ENST00000632964 APLP2Q06481 763 aa8.8□□□□□ -1
PHACTR4-207ENST00000632964 NESP48681 1621 aa8.78□□□□□ -1
PHACTR4-207ENST00000632964 DNMBPQ6XZF7 1577 aa8.77□□□□□ -1
PHACTR4-207ENST00000632964 LAMC3Q9Y6N6 1575 aa8.77□□□□□ -1
PHACTR4-207ENST00000632964 IGF1RP08069 1367 aa8.76□□□□□ -1.01
PHACTR4-207ENST00000632964 CCER1Q8TC90 406 aaPredicted RBP8.75□□□□□ -1.01
PHACTR4-207ENST00000632964 TOPBP1Q92547 1522 aa8.75□□□□□ -1.01
PHACTR4-207ENST00000632964 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP8.74□□□□□ -1.01
PHACTR4-207ENST00000632964 CARMIL1Q5VZK9 1371 aa8.73□□□□□ -1.01
PHACTR4-207ENST00000632964 ARAP1Q96P48 1450 aa8.73□□□□□ -1.01
PHACTR4-207ENST00000632964 PDS5BQ9NTI5 1447 aa8.72□□□□□ -1.01
PHACTR4-207ENST00000632964 PCDH10Q9P2E7 1040 aa8.72□□□□□ -1.01
PHACTR4-207ENST00000632964 POLA1P09884 1462 aaPredicted RBP8.72□□□□□ -1.01
PHACTR4-207ENST00000632964 ABCA10Q8WWZ4 1543 aa8.72□□□□□ -1.01
PHACTR4-207ENST00000632964 RAD54L2Q9Y4B4 1467 aa8.71□□□□□ -1.01
Retrieved 100 of 20,778 RNA–protein pairs in 99.6 ms