RNA–Protein interactions for RNA: ENST00000628360.1

TCF4-263, Transcript of transcription factor 4, humanhuman

TSL 5

Gene TCF4, Length 463 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TCF4-263ENST00000628360 AEBP2Q6ZN18 517 aaPredicted RBP23.21■■□□□ 1.31
TCF4-263ENST00000628360 CHIC1Q5VXU3 224 aa21.77■■□□□ 1.08
TCF4-263ENST00000628360 NISCHQ9Y2I1 1504 aa20.03■□□□□ 0.8
TCF4-263ENST00000628360 SENP3Q9H4L4 574 aaPredicted RBP19.79■□□□□ 0.76
TCF4-263ENST00000628360 PHF23Q9BUL5 403 aaPredicted RBP19.51■□□□□ 0.71
TCF4-263ENST00000628360 FOXD1Q16676 465 aa18.5■□□□□ 0.55
TCF4-263ENST00000628360 ABCC9O60706 1549 aa18.08■□□□□ 0.48
TCF4-263ENST00000628360 CCDC180Q9P1Z9 1646 aa17.9■□□□□ 0.46
TCF4-263ENST00000628360 POTEDQ86YR6 584 aa17.41■□□□□ 0.38
TCF4-263ENST00000628360 MSH5O43196 834 aa17.38■□□□□ 0.37
TCF4-263ENST00000628360 PLPPR3Q6T4P5 718 aa17.26■□□□□ 0.35
TCF4-263ENST00000628360 PIAS4Q8N2W9 510 aaPredicted RBP17.22■□□□□ 0.35
TCF4-263ENST00000628360 DCAF8L2P0C7V8 631 aa17.13■□□□□ 0.33
TCF4-263ENST00000628360 PPP6R1Q9UPN7 881 aa17.12■□□□□ 0.33
TCF4-263ENST00000628360 RB1CC1Q8TDY2 1594 aa17.11■□□□□ 0.33
TCF4-263ENST00000628360 ADRA2BP18089 450 aa17.04■□□□□ 0.32
TCF4-263ENST00000628360 DNAJC5BQ9UF47 199 aa16.98■□□□□ 0.31
TCF4-263ENST00000628360 NACADO15069 1562 aa16.97■□□□□ 0.31
TCF4-263ENST00000628360 PABPN1Q86U42 306 aaKnown RBP eCLIP16.89■□□□□ 0.29
TCF4-263ENST00000628360 UNC13AQ9UPW8 1703 aa16.7■□□□□ 0.26
TCF4-263ENST00000628360 MYO15BQ96JP2 1530 aa16.67■□□□□ 0.26
TCF4-263ENST00000628360 BICRAQ9NZM4 1560 aa16.6■□□□□ 0.25
TCF4-263ENST00000628360 ZCCHC6Q5VYS8 1495 aaKnown RBP16.59■□□□□ 0.25
TCF4-263ENST00000628360 DCAF1Q9Y4B6 1507 aa16.47■□□□□ 0.23
TCF4-263ENST00000628360 SCRIBQ14160 1630 aa16.45■□□□□ 0.22
TCF4-263ENST00000628360 SHROOM4Q9ULL8 1493 aa16.3■□□□□ 0.2
TCF4-263ENST00000628360 CC2D2AQ9P2K1 1620 aa16.27■□□□□ 0.19
TCF4-263ENST00000628360 CECR2Q9BXF3 1484 aa16.25■□□□□ 0.19
TCF4-263ENST00000628360 EIF4G1Q04637 1599 aaKnown RBP16.21■□□□□ 0.19
TCF4-263ENST00000628360 MAPK8IP2Q13387 824 aaPredicted RBP15.73■□□□□ 0.11
TCF4-263ENST00000628360 NCAPD3P42695 1498 aa15.68■□□□□ 0.1
TCF4-263ENST00000628360 DMRT2Q9Y5R5 561 aa15.68■□□□□ 0.1
TCF4-263ENST00000628360 ATAD2BQ9ULI0 1458 aa15.66■□□□□ 0.1
TCF4-263ENST00000628360 SMARCA4P51532 1647 aa15.63■□□□□ 0.09
TCF4-263ENST00000628360 ERCC6Q03468 1493 aa15.61■□□□□ 0.09
TCF4-263ENST00000628360 SMARCA2P51531 1590 aa15.59■□□□□ 0.09
TCF4-263ENST00000628360 DNAJC5Q9H3Z4 198 aa15.55■□□□□ 0.08
TCF4-263ENST00000628360 BAZ1AQ9NRL2 1556 aaPredicted RBP15.54■□□□□ 0.08
TCF4-263ENST00000628360 SCAF1Q9H7N4 1312 aaKnown RBP15.54■□□□□ 0.08
TCF4-263ENST00000628360 HMGXB3Q12766 1538 aa15.53■□□□□ 0.08
TCF4-263ENST00000628360 BAZ1BQ9UIG0 1483 aaKnown RBP15.53■□□□□ 0.08
TCF4-263ENST00000628360 NESP48681 1621 aa15.52■□□□□ 0.08
TCF4-263ENST00000628360 CUX2O14529 1486 aa15.48■□□□□ 0.07
TCF4-263ENST00000628360 MROH2BQ7Z745 1585 aa15.48■□□□□ 0.07
TCF4-263ENST00000628360 PEG3Q9GZU2 1588 aa15.41■□□□□ 0.06
TCF4-263ENST00000628360 LAMC3Q9Y6N6 1575 aa15.31■□□□□ 0.04
TCF4-263ENST00000628360 WIZO95785 1651 aa15.28■□□□□ 0.04
TCF4-263ENST00000628360 PDS5BQ9NTI5 1447 aa15.27■□□□□ 0.04
TCF4-263ENST00000628360 THOC2Q8NI27 1593 aaKnown RBP15.27■□□□□ 0.03
TCF4-263ENST00000628360 KIF21AQ7Z4S6 1674 aa15.25■□□□□ 0.03
TCF4-263ENST00000628360 CADPSQ9ULU8 1353 aa15.24■□□□□ 0.03
TCF4-263ENST00000628360 RSF1Q96T23 1441 aaPredicted RBP15.16■□□□□ 0.02
TCF4-263ENST00000628360 MRC2Q9UBG0 1479 aa15.14■□□□□ 0.01
TCF4-263ENST00000628360 PPP4R3CPQ6ZMV5 832 aa15.12■□□□□ 0.01
TCF4-263ENST00000628360 FANCD2Q9BXW9 1451 aa15.08■□□□□ 0.01
TCF4-263ENST00000628360 CEP164Q9UPV0 1460 aa15.08■□□□□ 0.01
TCF4-263ENST00000628360 WDR62O43379 1518 aa15.07■□□□□ 0
TCF4-263ENST00000628360 CACNB1Q02641 598 aaPredicted RBP15.06■□□□□ 0
TCF4-263ENST00000628360 TOP2AP11388 1531 aaKnown RBP15.06■□□□□ 0
TCF4-263ENST00000628360 CFTRP13569 1480 aa15.04■□□□□ -0
TCF4-263ENST00000628360 DCAF8L1A6NGE4 600 aa15.02■□□□□ -0
TCF4-263ENST00000628360 HOXD11P31277 338 aaPredicted RBP15□□□□□ -0.01
TCF4-263ENST00000628360 TRIM41Q8WV44 630 aa14.99□□□□□ -0.01
TCF4-263ENST00000628360 URB2Q14146 1524 aaKnown RBP14.95□□□□□ -0.02
TCF4-263ENST00000628360 CCDC88BA6NC98 1476 aa14.94□□□□□ -0.02
TCF4-263ENST00000628360 CNKSR2Q8WXI2 1034 aa14.88□□□□□ -0.03
TCF4-263ENST00000628360 OSCARQ8IYS5 282 aa14.87□□□□□ -0.03
TCF4-263ENST00000628360 RNF39Q9H2S5 420 aa14.82□□□□□ -0.04
TCF4-263ENST00000628360 PRDM2Q13029 1718 aa14.82□□□□□ -0.04
TCF4-263ENST00000628360 RNF216Q9NWF9 866 aaPredicted RBP14.81□□□□□ -0.04
TCF4-263ENST00000628360 ZNF608Q9ULD9 1512 aaPredicted RBP14.8□□□□□ -0.04
TCF4-263ENST00000628360 TOPBP1Q92547 1522 aa14.78□□□□□ -0.04
TCF4-263ENST00000628360 IFT140Q96RY7 1462 aa14.77□□□□□ -0.04
TCF4-263ENST00000628360 ABCC8Q09428 1581 aa14.7□□□□□ -0.06
TCF4-263ENST00000628360 DNMBPQ6XZF7 1577 aa14.7□□□□□ -0.06
TCF4-263ENST00000628360 AQRO60306 1485 aaKnown RBP eCLIP14.69□□□□□ -0.06
TCF4-263ENST00000628360 FBLN2P98095 1184 aa14.68□□□□□ -0.06
TCF4-263ENST00000628360 EIF4G3O43432 1585 aaKnown RBP14.66□□□□□ -0.06
TCF4-263ENST00000628360 SUPT5HO00267 1087 aaKnown RBP14.64□□□□□ -0.07
TCF4-263ENST00000628360 POLA1P09884 1462 aaPredicted RBP14.63□□□□□ -0.07
TCF4-263ENST00000628360 RAD54L2Q9Y4B4 1467 aa14.63□□□□□ -0.07
TCF4-263ENST00000628360 RIMBP3CA6NJZ7 1639 aa14.62□□□□□ -0.07
TCF4-263ENST00000628360 RIMBP3BA6NNM3 1639 aa14.62□□□□□ -0.07
TCF4-263ENST00000628360 TARBP1Q13395 1621 aaKnown RBP14.62□□□□□ -0.07
TCF4-263ENST00000628360 RIMBP3Q9UFD9 1639 aa14.62□□□□□ -0.07
TCF4-263ENST00000628360 TDRD9Q8NDG6 1382 aaKnown RBP14.61□□□□□ -0.07
TCF4-263ENST00000628360 SOGA1O94964 1423 aa14.6□□□□□ -0.07
TCF4-263ENST00000628360 ARHGEF11O15085 1522 aa14.58□□□□□ -0.08
TCF4-263ENST00000628360 CYB5RLQ6IPT4 315 aa14.58□□□□□ -0.08
TCF4-263ENST00000628360 C1QBPQ07021 282 aaKnown RBP14.57□□□□□ -0.08
TCF4-263ENST00000628360 CHD1O14646 1710 aa14.56□□□□□ -0.08
TCF4-263ENST00000628360 FGD5Q6ZNL6 1462 aa14.56□□□□□ -0.08
TCF4-263ENST00000628360 CUX1P39880 1505 aa14.53□□□□□ -0.08
TCF4-263ENST00000628360 CHMP7Q8WUX9 453 aaPredicted RBP14.51□□□□□ -0.09
TCF4-263ENST00000628360 SNAPC4Q5SXM2 1469 aa14.5□□□□□ -0.09
TCF4-263ENST00000628360 GRIN2BQ13224 1484 aa14.44□□□□□ -0.1
TCF4-263ENST00000628360 ARAP1Q96P48 1450 aa14.44□□□□□ -0.1
TCF4-263ENST00000628360 TRHP20396 242 aaPredicted RBP14.44□□□□□ -0.1
TCF4-263ENST00000628360 NCBP3Q53F19 620 aaKnown RBP14.43□□□□□ -0.1
TCF4-263ENST00000628360 MAGI1Q96QZ7 1491 aaPredicted RBP14.42□□□□□ -0.1
Retrieved 100 of 20,778 RNA–protein pairs in 86.8 ms