RNA–Protein interactions for RNA: ENST00000622604.4

SMIM25-205, Transcript of small integral membrane protein 25, humanhuman

TSL 3

Gene SMIM25, Length 1,808 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMIM25-205ENST00000622604 NISCHQ9Y2I1 1504 aa32.46■■■□□ 2.79
SMIM25-205ENST00000622604 CCDC180Q9P1Z9 1646 aa27.92■■■□□ 2.06
SMIM25-205ENST00000622604 ZCCHC6Q5VYS8 1495 aaKnown RBP27.46■■□□□ 1.99
SMIM25-205ENST00000622604 SHROOM4Q9ULL8 1493 aa27■■□□□ 1.91
SMIM25-205ENST00000622604 DCAF1Q9Y4B6 1507 aa26.93■■□□□ 1.9
SMIM25-205ENST00000622604 SUPT5HO00267 1087 aaKnown RBP26.51■■□□□ 1.83
SMIM25-205ENST00000622604 DCAF8L2P0C7V8 631 aa26.37■■□□□ 1.81
SMIM25-205ENST00000622604 MYO15BQ96JP2 1530 aa26.27■■□□□ 1.8
SMIM25-205ENST00000622604 CHIC1Q5VXU3 224 aa25.96■■□□□ 1.75
SMIM25-205ENST00000622604 ABCC9O60706 1549 aa25.89■■□□□ 1.73
SMIM25-205ENST00000622604 NACADO15069 1562 aa25.77■■□□□ 1.72
SMIM25-205ENST00000622604 SCRIBQ14160 1630 aa25.68■■□□□ 1.7
SMIM25-205ENST00000622604 RSF1Q96T23 1441 aaPredicted RBP25.53■■□□□ 1.68
SMIM25-205ENST00000622604 RB1CC1Q8TDY2 1594 aa25.39■■□□□ 1.65
SMIM25-205ENST00000622604 CECR2Q9BXF3 1484 aa25.08■■□□□ 1.61
SMIM25-205ENST00000622604 MROH2BQ7Z745 1585 aa25.08■■□□□ 1.6
SMIM25-205ENST00000622604 BAZ1AQ9NRL2 1556 aaPredicted RBP25■■□□□ 1.59
SMIM25-205ENST00000622604 HRCP23327 699 aa25■■□□□ 1.59
SMIM25-205ENST00000622604 LOC105371045A0A1W2PR82 267 aa24.94■■□□□ 1.58
SMIM25-205ENST00000622604 WIZO95785 1651 aa24.94■■□□□ 1.58
SMIM25-205ENST00000622604 TRIM41Q8WV44 630 aa24.92■■□□□ 1.58
SMIM25-205ENST00000622604 PCGF6Q9BYE7 350 aa24.84■■□□□ 1.57
SMIM25-205ENST00000622604 UNC13AQ9UPW8 1703 aa24.83■■□□□ 1.57
SMIM25-205ENST00000622604 SMARCA4P51532 1647 aa24.75■■□□□ 1.55
SMIM25-205ENST00000622604 TOP2AP11388 1531 aaKnown RBP24.73■■□□□ 1.55
SMIM25-205ENST00000622604 EIF4G1Q04637 1599 aaKnown RBP24.72■■□□□ 1.55
SMIM25-205ENST00000622604 TRIM26Q12899 539 aaPredicted RBP24.7■■□□□ 1.54
SMIM25-205ENST00000622604 SMARCA2P51531 1590 aa24.52■■□□□ 1.52
SMIM25-205ENST00000622604 BICRAQ9NZM4 1560 aa24.48■■□□□ 1.51
SMIM25-205ENST00000622604 CCDC88BA6NC98 1476 aa24.48■■□□□ 1.51
SMIM25-205ENST00000622604 PEG3Q9GZU2 1588 aa24.46■■□□□ 1.51
SMIM25-205ENST00000622604 FAM9AQ8IZU1 332 aaPredicted RBP24.39■■□□□ 1.49
SMIM25-205ENST00000622604 ZEB1P37275 1124 aaPredicted RBP24.31■■□□□ 1.48
SMIM25-205ENST00000622604 EEA1Q15075 1411 aa24.27■■□□□ 1.48
SMIM25-205ENST00000622604 ABCC8Q09428 1581 aa24.21■■□□□ 1.47
SMIM25-205ENST00000622604 PABPN1Q86U42 306 aaKnown RBP eCLIP24.11■■□□□ 1.45
SMIM25-205ENST00000622604 PPARGC1BQ86YN6 1023 aaKnown RBP24.1■■□□□ 1.45
SMIM25-205ENST00000622604 WRNQ14191 1432 aaPredicted RBP eCLIP24.09■■□□□ 1.45
SMIM25-205ENST00000622604 ATAD2BQ9ULI0 1458 aa24.09■■□□□ 1.45
SMIM25-205ENST00000622604 PELP1Q8IZL8 1130 aaKnown RBP24.08■■□□□ 1.45
SMIM25-205ENST00000622604 TNIKQ9UKE5 1360 aa24.05■■□□□ 1.44
SMIM25-205ENST00000622604 BAZ1BQ9UIG0 1483 aaKnown RBP24■■□□□ 1.43
SMIM25-205ENST00000622604 SOGA1O94964 1423 aa23.97■■□□□ 1.43
SMIM25-205ENST00000622604 CSRNP3Q8WYN3 585 aa23.96■■□□□ 1.43
SMIM25-205ENST00000622604 CEP162Q5TB80 1403 aa23.93■■□□□ 1.42
SMIM25-205ENST00000622604 EHMT2Q96KQ7 1210 aa23.92■■□□□ 1.42
SMIM25-205ENST00000622604 GOLGA3Q08378 1498 aa23.91■■□□□ 1.42
SMIM25-205ENST00000622604 KIF21BO75037 1637 aa23.87■■□□□ 1.41
SMIM25-205ENST00000622604 SYNJ1O43426 1573 aa23.85■■□□□ 1.41
SMIM25-205ENST00000622604 CEP164Q9UPV0 1460 aa23.82■■□□□ 1.4
SMIM25-205ENST00000622604 HMGXB3Q12766 1538 aa23.81■■□□□ 1.4
SMIM25-205ENST00000622604 RUSC2Q8N2Y8 1516 aa23.81■■□□□ 1.4
SMIM25-205ENST00000622604 NCAPD3P42695 1498 aa23.76■■□□□ 1.39
SMIM25-205ENST00000622604 TOP2BQ02880 1626 aa23.74■■□□□ 1.39
SMIM25-205ENST00000622604 BIVM-ERCC5R4GMW8 1640 aa23.71■■□□□ 1.39
SMIM25-205ENST00000622604 UBTFP17480 764 aaKnown RBP23.69■■□□□ 1.38
SMIM25-205ENST00000622604 ERICH3Q5RHP9 1530 aa23.53■■□□□ 1.36
SMIM25-205ENST00000622604 CLIP1P30622 1438 aa23.53■■□□□ 1.36
SMIM25-205ENST00000622604 PRDM2Q13029 1718 aa23.51■■□□□ 1.35
SMIM25-205ENST00000622604 CCER1Q8TC90 406 aaPredicted RBP23.5■■□□□ 1.35
SMIM25-205ENST00000622604 VPS8Q8N3P4 1428 aa23.48■■□□□ 1.35
SMIM25-205ENST00000622604 CFTRP13569 1480 aa23.48■■□□□ 1.35
SMIM25-205ENST00000622604 RAPGEF2Q9Y4G8 1499 aa23.46■■□□□ 1.35
SMIM25-205ENST00000622604 PRXQ9BXM0 1461 aa23.43■■□□□ 1.34
SMIM25-205ENST00000622604 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP23.43■■□□□ 1.34
SMIM25-205ENST00000622604 CUX1P39880 1505 aa23.39■■□□□ 1.34
SMIM25-205ENST00000622604 KIF27Q86VH2 1401 aa23.34■■□□□ 1.33
SMIM25-205ENST00000622604 APLP2Q06481 763 aa23.29■■□□□ 1.32
SMIM25-205ENST00000622604 MYT1Q01538 1121 aa23.28■■□□□ 1.32
SMIM25-205ENST00000622604 CADPSQ9ULU8 1353 aa23.19■■□□□ 1.3
SMIM25-205ENST00000622604 TTBK1Q5TCY1 1321 aaPredicted RBP23.18■■□□□ 1.3
SMIM25-205ENST00000622604 ARAP1Q96P48 1450 aa23.17■■□□□ 1.3
SMIM25-205ENST00000622604 SCAF1Q9H7N4 1312 aaKnown RBP23.13■■□□□ 1.29
SMIM25-205ENST00000622604 CC2D2AQ9P2K1 1620 aa23.06■■□□□ 1.28
SMIM25-205ENST00000622604 CLSPNQ9HAW4 1339 aa23.04■■□□□ 1.28
SMIM25-205ENST00000622604 IGF1RP08069 1367 aa23.02■■□□□ 1.28
SMIM25-205ENST00000622604 DIEXFQ68CQ4 756 aaKnown RBP23.01■■□□□ 1.27
SMIM25-205ENST00000622604 CUX2O14529 1486 aa23.01■■□□□ 1.27
SMIM25-205ENST00000622604 MAP3K1Q13233 1512 aa23.01■■□□□ 1.27
SMIM25-205ENST00000622604 ARHGAP35Q9NRY4 1499 aa23■■□□□ 1.27
SMIM25-205ENST00000622604 FGD5Q6ZNL6 1462 aa22.98■■□□□ 1.27
SMIM25-205ENST00000622604 HNRNPUL2Q1KMD3 747 aaKnown RBP22.98■■□□□ 1.27
SMIM25-205ENST00000622604 RRBP1Q9P2E9 1410 aaKnown RBP22.97■■□□□ 1.27
SMIM25-205ENST00000622604 ZNF316A6NFI3 1004 aaPredicted RBP22.97■■□□□ 1.27
SMIM25-205ENST00000622604 DNMBPQ6XZF7 1577 aa22.92■■□□□ 1.26
SMIM25-205ENST00000622604 CARMIL1Q5VZK9 1371 aa22.92■■□□□ 1.26
SMIM25-205ENST00000622604 FANCD2Q9BXW9 1451 aa22.91■■□□□ 1.26
SMIM25-205ENST00000622604 RANGAP1P46060 587 aaPredicted RBP22.89■■□□□ 1.25
SMIM25-205ENST00000622604 ACIN1Q9UKV3 1341 aaKnown RBP22.88■■□□□ 1.25
SMIM25-205ENST00000622604 ABCA10Q8WWZ4 1543 aa22.85■■□□□ 1.25
SMIM25-205ENST00000622604 KANK4Q5T7N3 995 aaPredicted RBP22.83■■□□□ 1.25
SMIM25-205ENST00000622604 CENPBP07199 599 aaPredicted RBP22.82■■□□□ 1.24
SMIM25-205ENST00000622604 TIAM1Q13009 1591 aa22.81■■□□□ 1.24
SMIM25-205ENST00000622604 CUL7Q14999 1698 aa22.81■■□□□ 1.24
SMIM25-205ENST00000622604 FHAD1B1AJZ9 1412 aa22.8■■□□□ 1.24
SMIM25-205ENST00000622604 LAMC3Q9Y6N6 1575 aa22.79■■□□□ 1.24
SMIM25-205ENST00000622604 TOPBP1Q92547 1522 aa22.79■■□□□ 1.24
SMIM25-205ENST00000622604 CCNB3Q8WWL7 1395 aa22.78■■□□□ 1.24
SMIM25-205ENST00000622604 DHX57Q6P158 1386 aaKnown RBP22.77■■□□□ 1.24
SMIM25-205ENST00000622604 EFCAB5A4FU69 1503 aa22.76■■□□□ 1.23
Retrieved 100 of 20,778 RNA–protein pairs in 22.9 ms