RNA–Protein interactions for RNA: ENST00000621582.1

SRGAP2B-206, Transcript of SLIT-ROBO Rho GTPase activating protein 2B, humanhuman

TSL 5

Gene SRGAP2B, Length 486 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRGAP2B-206ENST00000621582 CHIC1Q5VXU3 224 aa11.57□□□□□ -0.56
SRGAP2B-206ENST00000621582 AEBP2Q6ZN18 517 aaPredicted RBP11.51□□□□□ -0.57
SRGAP2B-206ENST00000621582 NISCHQ9Y2I1 1504 aa11.04□□□□□ -0.64
SRGAP2B-206ENST00000621582 PHF23Q9BUL5 403 aaPredicted RBP10.13□□□□□ -0.79
SRGAP2B-206ENST00000621582 SENP3Q9H4L4 574 aaPredicted RBP9.85□□□□□ -0.83
SRGAP2B-206ENST00000621582 CCDC180Q9P1Z9 1646 aa9.68□□□□□ -0.86
SRGAP2B-206ENST00000621582 ABCC9O60706 1549 aa9.61□□□□□ -0.87
SRGAP2B-206ENST00000621582 PLPPR3Q6T4P5 718 aa9.57□□□□□ -0.88
SRGAP2B-206ENST00000621582 DCAF8L2P0C7V8 631 aa9.46□□□□□ -0.9
SRGAP2B-206ENST00000621582 NACADO15069 1562 aa9.2□□□□□ -0.94
SRGAP2B-206ENST00000621582 RB1CC1Q8TDY2 1594 aa9.2□□□□□ -0.94
SRGAP2B-206ENST00000621582 ZCCHC6Q5VYS8 1495 aaKnown RBP9.17□□□□□ -0.94
SRGAP2B-206ENST00000621582 MYO15BQ96JP2 1530 aa9.13□□□□□ -0.95
SRGAP2B-206ENST00000621582 DCAF1Q9Y4B6 1507 aa9.1□□□□□ -0.95
SRGAP2B-206ENST00000621582 PABPN1Q86U42 306 aaKnown RBP eCLIP9.08□□□□□ -0.96
SRGAP2B-206ENST00000621582 FOXD1Q16676 465 aa9.03□□□□□ -0.96
SRGAP2B-206ENST00000621582 SCRIBQ14160 1630 aa8.92□□□□□ -0.98
SRGAP2B-206ENST00000621582 ADRA2BP18089 450 aa8.9□□□□□ -0.98
SRGAP2B-206ENST00000621582 SHROOM4Q9ULL8 1493 aa8.87□□□□□ -0.99
SRGAP2B-206ENST00000621582 BICRAQ9NZM4 1560 aa8.86□□□□□ -0.99
SRGAP2B-206ENST00000621582 PPP6R1Q9UPN7 881 aa8.84□□□□□ -0.99
SRGAP2B-206ENST00000621582 DNAJC5BQ9UF47 199 aa8.83□□□□□ -1
SRGAP2B-206ENST00000621582 UNC13AQ9UPW8 1703 aa8.82□□□□□ -1
SRGAP2B-206ENST00000621582 EIF4G1Q04637 1599 aaKnown RBP8.67□□□□□ -1.02
SRGAP2B-206ENST00000621582 PIAS4Q8N2W9 510 aaPredicted RBP8.66□□□□□ -1.02
SRGAP2B-206ENST00000621582 CECR2Q9BXF3 1484 aa8.64□□□□□ -1.03
SRGAP2B-206ENST00000621582 CC2D2AQ9P2K1 1620 aa8.62□□□□□ -1.03
SRGAP2B-206ENST00000621582 BAZ1AQ9NRL2 1556 aaPredicted RBP8.56□□□□□ -1.04
SRGAP2B-206ENST00000621582 ATAD2BQ9ULI0 1458 aa8.53□□□□□ -1.04
SRGAP2B-206ENST00000621582 NCAPD3P42695 1498 aa8.52□□□□□ -1.05
SRGAP2B-206ENST00000621582 KCNA4P22459 653 aa8.52□□□□□ -1.05
SRGAP2B-206ENST00000621582 SMARCA4P51532 1647 aa8.51□□□□□ -1.05
SRGAP2B-206ENST00000621582 MROH2BQ7Z745 1585 aa8.51□□□□□ -1.05
SRGAP2B-206ENST00000621582 SMARCA2P51531 1590 aa8.5□□□□□ -1.05
SRGAP2B-206ENST00000621582 BAZ1BQ9UIG0 1483 aaKnown RBP8.47□□□□□ -1.05
SRGAP2B-206ENST00000621582 RSF1Q96T23 1441 aaPredicted RBP8.46□□□□□ -1.05
SRGAP2B-206ENST00000621582 PPP4R3CPQ6ZMV5 832 aa8.44□□□□□ -1.06
SRGAP2B-206ENST00000621582 SUPT5HO00267 1087 aaKnown RBP8.43□□□□□ -1.06
SRGAP2B-206ENST00000621582 HMGXB3Q12766 1538 aa8.42□□□□□ -1.06
SRGAP2B-206ENST00000621582 PEG3Q9GZU2 1588 aa8.41□□□□□ -1.06
SRGAP2B-206ENST00000621582 WIZO95785 1651 aa8.38□□□□□ -1.07
SRGAP2B-206ENST00000621582 NCBP3Q53F19 620 aaKnown RBP8.37□□□□□ -1.07
SRGAP2B-206ENST00000621582 CADPSQ9ULU8 1353 aa8.33□□□□□ -1.08
SRGAP2B-206ENST00000621582 EHMT2Q96KQ7 1210 aa8.32□□□□□ -1.08
SRGAP2B-206ENST00000621582 ERCC6Q03468 1493 aa8.32□□□□□ -1.08
SRGAP2B-206ENST00000621582 TOP2AP11388 1531 aaKnown RBP8.31□□□□□ -1.08
SRGAP2B-206ENST00000621582 MSH5O43196 834 aa8.31□□□□□ -1.08
SRGAP2B-206ENST00000621582 PDS5BQ9NTI5 1447 aa8.29□□□□□ -1.08
SRGAP2B-206ENST00000621582 NESP48681 1621 aa8.29□□□□□ -1.08
SRGAP2B-206ENST00000621582 CCDC88BA6NC98 1476 aa8.27□□□□□ -1.09
SRGAP2B-206ENST00000621582 SCAF1Q9H7N4 1312 aaKnown RBP8.26□□□□□ -1.09
SRGAP2B-206ENST00000621582 LAMC3Q9Y6N6 1575 aa8.24□□□□□ -1.09
SRGAP2B-206ENST00000621582 CFTRP13569 1480 aa8.24□□□□□ -1.09
SRGAP2B-206ENST00000621582 SLC4A1APQ9BWU0 796 aaKnown RBP8.23□□□□□ -1.09
SRGAP2B-206ENST00000621582 FANCD2Q9BXW9 1451 aa8.19□□□□□ -1.1
SRGAP2B-206ENST00000621582 CEP164Q9UPV0 1460 aa8.17□□□□□ -1.1
SRGAP2B-206ENST00000621582 NPM3O75607 178 aaKnown RBP8.16□□□□□ -1.1
SRGAP2B-206ENST00000621582 CNKSR2Q8WXI2 1034 aa8.16□□□□□ -1.1
SRGAP2B-206ENST00000621582 CUX2O14529 1486 aa8.15□□□□□ -1.1
SRGAP2B-206ENST00000621582 MRC2Q9UBG0 1479 aa8.14□□□□□ -1.11
SRGAP2B-206ENST00000621582 KIF21AQ7Z4S6 1674 aa8.08□□□□□ -1.12
SRGAP2B-206ENST00000621582 ABCC8Q09428 1581 aa8.08□□□□□ -1.12
SRGAP2B-206ENST00000621582 URB2Q14146 1524 aaKnown RBP8.07□□□□□ -1.12
SRGAP2B-206ENST00000621582 WDR62O43379 1518 aa8.06□□□□□ -1.12
SRGAP2B-206ENST00000621582 THOC2Q8NI27 1593 aaKnown RBP8.05□□□□□ -1.12
SRGAP2B-206ENST00000621582 TOPBP1Q92547 1522 aa8.03□□□□□ -1.12
SRGAP2B-206ENST00000621582 SOGA1O94964 1423 aa8.02□□□□□ -1.13
SRGAP2B-206ENST00000621582 IFT140Q96RY7 1462 aa8.01□□□□□ -1.13
SRGAP2B-206ENST00000621582 CSRNP3Q8WYN3 585 aa8□□□□□ -1.13
SRGAP2B-206ENST00000621582 WRNQ14191 1432 aaPredicted RBP eCLIP8□□□□□ -1.13
SRGAP2B-206ENST00000621582 DNMBPQ6XZF7 1577 aa8□□□□□ -1.13
SRGAP2B-206ENST00000621582 TDRD9Q8NDG6 1382 aaKnown RBP7.98□□□□□ -1.13
SRGAP2B-206ENST00000621582 FBLN2P98095 1184 aa7.98□□□□□ -1.13
SRGAP2B-206ENST00000621582 POLA1P09884 1462 aaPredicted RBP7.98□□□□□ -1.13
SRGAP2B-206ENST00000621582 RAD54L2Q9Y4B4 1467 aa7.97□□□□□ -1.13
SRGAP2B-206ENST00000621582 PRDM2Q13029 1718 aa7.97□□□□□ -1.13
SRGAP2B-206ENST00000621582 CUX1P39880 1505 aa7.97□□□□□ -1.13
SRGAP2B-206ENST00000621582 AQRO60306 1485 aaKnown RBP eCLIP7.96□□□□□ -1.13
SRGAP2B-206ENST00000621582 FGD5Q6ZNL6 1462 aa7.96□□□□□ -1.13
SRGAP2B-206ENST00000621582 MAPK8IP2Q13387 824 aaPredicted RBP7.96□□□□□ -1.14
SRGAP2B-206ENST00000621582 OSCARQ8IYS5 282 aa7.96□□□□□ -1.14
SRGAP2B-206ENST00000621582 TRIM41Q8WV44 630 aa7.96□□□□□ -1.14
SRGAP2B-206ENST00000621582 DNAJC5Q9H3Z4 198 aa7.96□□□□□ -1.14
SRGAP2B-206ENST00000621582 ZNF608Q9ULD9 1512 aaPredicted RBP7.95□□□□□ -1.14
SRGAP2B-206ENST00000621582 CHMP7Q8WUX9 453 aaPredicted RBP7.94□□□□□ -1.14
SRGAP2B-206ENST00000621582 RNF216Q9NWF9 866 aaPredicted RBP7.92□□□□□ -1.14
SRGAP2B-206ENST00000621582 TOP2BQ02880 1626 aa7.89□□□□□ -1.15
SRGAP2B-206ENST00000621582 GAPVD1Q14C86 1478 aa7.89□□□□□ -1.15
SRGAP2B-206ENST00000621582 SYNJ1O43426 1573 aa7.88□□□□□ -1.15
SRGAP2B-206ENST00000621582 ABCA10Q8WWZ4 1543 aa7.88□□□□□ -1.15
SRGAP2B-206ENST00000621582 GRIN2BQ13224 1484 aa7.88□□□□□ -1.15
SRGAP2B-206ENST00000621582 TARBP1Q13395 1621 aaKnown RBP7.88□□□□□ -1.15
SRGAP2B-206ENST00000621582 DMRT2Q9Y5R5 561 aa7.86□□□□□ -1.15
SRGAP2B-206ENST00000621582 KIF27Q86VH2 1401 aa7.86□□□□□ -1.15
SRGAP2B-206ENST00000621582 SNAPC4Q5SXM2 1469 aa7.85□□□□□ -1.15
SRGAP2B-206ENST00000621582 EIF4G3O43432 1585 aaKnown RBP7.84□□□□□ -1.15
SRGAP2B-206ENST00000621582 BIVM-ERCC5R4GMW8 1640 aa7.84□□□□□ -1.15
SRGAP2B-206ENST00000621582 MAGI1Q96QZ7 1491 aaPredicted RBP7.83□□□□□ -1.16
SRGAP2B-206ENST00000621582 FOXD4L1Q9NU39 408 aa7.83□□□□□ -1.16
SRGAP2B-206ENST00000621582 IGF1RP08069 1367 aa7.83□□□□□ -1.16
Retrieved 100 of 20,778 RNA–protein pairs in 12.2 ms