RNA–Protein interactions for RNA: ENST00000621345.4

CASP7-211, Transcript of caspase 7, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CASP7, Length 2,467 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CASP7-211ENST00000621345 NISCHQ9Y2I1 1504 aa22.79■■□□□ 1.24
CASP7-211ENST00000621345 CCDC180Q9P1Z9 1646 aa19.91■□□□□ 0.78
CASP7-211ENST00000621345 SHROOM4Q9ULL8 1493 aa19.29■□□□□ 0.68
CASP7-211ENST00000621345 ZCCHC6Q5VYS8 1495 aaKnown RBP19.14■□□□□ 0.66
CASP7-211ENST00000621345 SUPT5HO00267 1087 aaKnown RBP19.03■□□□□ 0.64
CASP7-211ENST00000621345 DCAF1Q9Y4B6 1507 aa18.88■□□□□ 0.61
CASP7-211ENST00000621345 DCAF8L2P0C7V8 631 aa18.8■□□□□ 0.6
CASP7-211ENST00000621345 ABCC9O60706 1549 aa18.79■□□□□ 0.6
CASP7-211ENST00000621345 MYO15BQ96JP2 1530 aa18.69■□□□□ 0.58
CASP7-211ENST00000621345 HRCP23327 699 aa18.6■□□□□ 0.57
CASP7-211ENST00000621345 NACADO15069 1562 aa18.55■□□□□ 0.56
CASP7-211ENST00000621345 CHIC1Q5VXU3 224 aa18.53■□□□□ 0.56
CASP7-211ENST00000621345 PCGF6Q9BYE7 350 aa18.48■□□□□ 0.55
CASP7-211ENST00000621345 PPARGC1BQ86YN6 1023 aaKnown RBP18.43■□□□□ 0.54
CASP7-211ENST00000621345 RB1CC1Q8TDY2 1594 aa18.39■□□□□ 0.53
CASP7-211ENST00000621345 SCRIBQ14160 1630 aa18.27■□□□□ 0.51
CASP7-211ENST00000621345 LOC105371045A0A1W2PR82 267 aa18.18■□□□□ 0.5
CASP7-211ENST00000621345 UNC13AQ9UPW8 1703 aa17.98■□□□□ 0.47
CASP7-211ENST00000621345 TRIM26Q12899 539 aaPredicted RBP17.83■□□□□ 0.44
CASP7-211ENST00000621345 BICRAQ9NZM4 1560 aa17.79■□□□□ 0.44
CASP7-211ENST00000621345 SLC24A1O60721 1099 aa17.71■□□□□ 0.43
CASP7-211ENST00000621345 PABPN1Q86U42 306 aaKnown RBP eCLIP17.7■□□□□ 0.42
CASP7-211ENST00000621345 CECR2Q9BXF3 1484 aa17.67■□□□□ 0.42
CASP7-211ENST00000621345 EHMT2Q96KQ7 1210 aa17.66■□□□□ 0.42
CASP7-211ENST00000621345 RSF1Q96T23 1441 aaPredicted RBP17.66■□□□□ 0.42
CASP7-211ENST00000621345 FAM9AQ8IZU1 332 aaPredicted RBP17.64■□□□□ 0.42
CASP7-211ENST00000621345 BAZ1AQ9NRL2 1556 aaPredicted RBP17.62■□□□□ 0.41
CASP7-211ENST00000621345 MROH2BQ7Z745 1585 aa17.59■□□□□ 0.41
CASP7-211ENST00000621345 TRIM41Q8WV44 630 aa17.54■□□□□ 0.4
CASP7-211ENST00000621345 SMARCA4P51532 1647 aa17.53■□□□□ 0.4
CASP7-211ENST00000621345 SCAF1Q9H7N4 1312 aaKnown RBP17.5■□□□□ 0.39
CASP7-211ENST00000621345 ZEB1P37275 1124 aaPredicted RBP17.45■□□□□ 0.38
CASP7-211ENST00000621345 WIZO95785 1651 aa17.44■□□□□ 0.38
CASP7-211ENST00000621345 PEG3Q9GZU2 1588 aa17.33■□□□□ 0.36
CASP7-211ENST00000621345 TOP2AP11388 1531 aaKnown RBP17.29■□□□□ 0.36
CASP7-211ENST00000621345 EIF4G1Q04637 1599 aaKnown RBP17.28■□□□□ 0.36
CASP7-211ENST00000621345 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP17.26■□□□□ 0.35
CASP7-211ENST00000621345 SMARCA2P51531 1590 aa17.26■□□□□ 0.35
CASP7-211ENST00000621345 AEBP2Q6ZN18 517 aaPredicted RBP17.24■□□□□ 0.35
CASP7-211ENST00000621345 ATAD2BQ9ULI0 1458 aa17.23■□□□□ 0.35
CASP7-211ENST00000621345 PELP1Q8IZL8 1130 aaKnown RBP17.23■□□□□ 0.35
CASP7-211ENST00000621345 TTBK1Q5TCY1 1321 aaPredicted RBP17.17■□□□□ 0.34
CASP7-211ENST00000621345 BAZ1BQ9UIG0 1483 aaKnown RBP17.15■□□□□ 0.34
CASP7-211ENST00000621345 NEUROD1Q13562 356 aa17.14■□□□□ 0.33
CASP7-211ENST00000621345 CCER1Q8TC90 406 aaPredicted RBP17.13■□□□□ 0.33
CASP7-211ENST00000621345 NCAPD3P42695 1498 aa17.1■□□□□ 0.33
CASP7-211ENST00000621345 CCDC88BA6NC98 1476 aa17.1■□□□□ 0.33
CASP7-211ENST00000621345 HMGXB3Q12766 1538 aa17.09■□□□□ 0.33
CASP7-211ENST00000621345 ACIN1Q9UKV3 1341 aaKnown RBP17.08■□□□□ 0.33
CASP7-211ENST00000621345 CC2D2AQ9P2K1 1620 aa17.02■□□□□ 0.32
CASP7-211ENST00000621345 GTF3C3Q9Y5Q9 886 aa16.99■□□□□ 0.31
CASP7-211ENST00000621345 DIEXFQ68CQ4 756 aaKnown RBP16.98■□□□□ 0.31
CASP7-211ENST00000621345 ABCC8Q09428 1581 aa16.89■□□□□ 0.29
CASP7-211ENST00000621345 CENPBP07199 599 aaPredicted RBP16.82■□□□□ 0.28
CASP7-211ENST00000621345 CEP162Q5TB80 1403 aa16.81■□□□□ 0.28
CASP7-211ENST00000621345 YTHDC1Q96MU7 727 aaKnown RBP16.81■□□□□ 0.28
CASP7-211ENST00000621345 SOGA1O94964 1423 aa16.79■□□□□ 0.28
CASP7-211ENST00000621345 WRNQ14191 1432 aaPredicted RBP eCLIP16.74■□□□□ 0.27
CASP7-211ENST00000621345 RUSC2Q8N2Y8 1516 aa16.72■□□□□ 0.27
CASP7-211ENST00000621345 CFTRP13569 1480 aa16.72■□□□□ 0.27
CASP7-211ENST00000621345 ZNF316A6NFI3 1004 aaPredicted RBP16.7■□□□□ 0.26
CASP7-211ENST00000621345 UBTFP17480 764 aaKnown RBP16.7■□□□□ 0.26
CASP7-211ENST00000621345 CADPSQ9ULU8 1353 aa16.66■□□□□ 0.26
CASP7-211ENST00000621345 PRDM2Q13029 1718 aa16.65■□□□□ 0.26
CASP7-211ENST00000621345 HNRNPUL2Q1KMD3 747 aaKnown RBP16.64■□□□□ 0.26
CASP7-211ENST00000621345 TNIKQ9UKE5 1360 aa16.64■□□□□ 0.25
CASP7-211ENST00000621345 MIER1Q8N108 512 aa16.64■□□□□ 0.25
CASP7-211ENST00000621345 CSRNP3Q8WYN3 585 aa16.61■□□□□ 0.25
CASP7-211ENST00000621345 SYNJ1O43426 1573 aa16.55■□□□□ 0.24
CASP7-211ENST00000621345 LAMC3Q9Y6N6 1575 aa16.54■□□□□ 0.24
CASP7-211ENST00000621345 DNAJC5BQ9UF47 199 aa16.54■□□□□ 0.24
CASP7-211ENST00000621345 RANGAP1P46060 587 aaPredicted RBP16.52■□□□□ 0.23
CASP7-211ENST00000621345 TOP2BQ02880 1626 aa16.52■□□□□ 0.23
CASP7-211ENST00000621345 BIVM-ERCC5R4GMW8 1640 aa16.5■□□□□ 0.23
CASP7-211ENST00000621345 PHF23Q9BUL5 403 aaPredicted RBP16.5■□□□□ 0.23
CASP7-211ENST00000621345 GOLGA3Q08378 1498 aa16.49■□□□□ 0.23
CASP7-211ENST00000621345 FANCD2Q9BXW9 1451 aa16.48■□□□□ 0.23
CASP7-211ENST00000621345 NESP48681 1621 aa16.48■□□□□ 0.23
CASP7-211ENST00000621345 CUX1P39880 1505 aa16.45■□□□□ 0.22
CASP7-211ENST00000621345 EEA1Q15075 1411 aa16.44■□□□□ 0.22
CASP7-211ENST00000621345 PDS5BQ9NTI5 1447 aa16.42■□□□□ 0.22
CASP7-211ENST00000621345 PLPPR3Q6T4P5 718 aa16.42■□□□□ 0.22
CASP7-211ENST00000621345 CLIP1P30622 1438 aa16.4■□□□□ 0.22
CASP7-211ENST00000621345 CEP164Q9UPV0 1460 aa16.38■□□□□ 0.21
CASP7-211ENST00000621345 MYT1Q01538 1121 aa16.36■□□□□ 0.21
CASP7-211ENST00000621345 DNMBPQ6XZF7 1577 aa16.34■□□□□ 0.21
CASP7-211ENST00000621345 VPS8Q8N3P4 1428 aa16.32■□□□□ 0.2
CASP7-211ENST00000621345 RAPGEF2Q9Y4G8 1499 aa16.32■□□□□ 0.2
CASP7-211ENST00000621345 KIF21AQ7Z4S6 1674 aa16.3■□□□□ 0.2
CASP7-211ENST00000621345 APLP2Q06481 763 aa16.29■□□□□ 0.2
CASP7-211ENST00000621345 TOPBP1Q92547 1522 aa16.29■□□□□ 0.2
CASP7-211ENST00000621345 FGD5Q6ZNL6 1462 aa16.28■□□□□ 0.2
CASP7-211ENST00000621345 KIF21BO75037 1637 aa16.28■□□□□ 0.2
CASP7-211ENST00000621345 RTN4Q9NQC3 1192 aaKnown RBP16.26■□□□□ 0.19
CASP7-211ENST00000621345 URB2Q14146 1524 aaKnown RBP16.25■□□□□ 0.19
CASP7-211ENST00000621345 KIF27Q86VH2 1401 aa16.24■□□□□ 0.19
CASP7-211ENST00000621345 SUPT16HQ9Y5B9 1047 aaKnown RBP16.23■□□□□ 0.19
CASP7-211ENST00000621345 DHX57Q6P158 1386 aaKnown RBP16.22■□□□□ 0.19
CASP7-211ENST00000621345 POLA1P09884 1462 aaPredicted RBP16.2■□□□□ 0.18
CASP7-211ENST00000621345 KANK4Q5T7N3 995 aaPredicted RBP16.19■□□□□ 0.18
Retrieved 100 of 20,778 RNA–protein pairs in 44.1 ms