RNA–Protein interactions for RNA: ENST00000618921.4

CBWD3-214, Transcript of COBW domain containing 3, humanhuman

TSL 5

Gene CBWD3, Length 2,021 nt, Biotype processed transcript, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBWD3-214ENST00000618921 NISCHQ9Y2I1 1504 aa15.65■□□□□ 0.1
CBWD3-214ENST00000618921 CHIC1Q5VXU3 224 aa15.63■□□□□ 0.09
CBWD3-214ENST00000618921 AEBP2Q6ZN18 517 aaPredicted RBP14.94□□□□□ -0.02
CBWD3-214ENST00000618921 ABCC9O60706 1549 aa14.53□□□□□ -0.08
CBWD3-214ENST00000618921 CCDC180Q9P1Z9 1646 aa14.1□□□□□ -0.15
CBWD3-214ENST00000618921 DNAJC5BQ9UF47 199 aa14.03□□□□□ -0.16
CBWD3-214ENST00000618921 PHF23Q9BUL5 403 aaPredicted RBP13.91□□□□□ -0.18
CBWD3-214ENST00000618921 RB1CC1Q8TDY2 1594 aa13.62□□□□□ -0.23
CBWD3-214ENST00000618921 PABPN1Q86U42 306 aaKnown RBP eCLIP13.56□□□□□ -0.24
CBWD3-214ENST00000618921 DCAF8L2P0C7V8 631 aa13.49□□□□□ -0.25
CBWD3-214ENST00000618921 NACADO15069 1562 aa13.46□□□□□ -0.26
CBWD3-214ENST00000618921 EHMT2Q96KQ7 1210 aa13.4□□□□□ -0.26
CBWD3-214ENST00000618921 UNC13AQ9UPW8 1703 aa13.32□□□□□ -0.28
CBWD3-214ENST00000618921 SLC24A1O60721 1099 aa13.3□□□□□ -0.28
CBWD3-214ENST00000618921 BICRAQ9NZM4 1560 aa13.27□□□□□ -0.28
CBWD3-214ENST00000618921 PLPPR3Q6T4P5 718 aa13.18□□□□□ -0.3
CBWD3-214ENST00000618921 MYO15BQ96JP2 1530 aa13.15□□□□□ -0.3
CBWD3-214ENST00000618921 CECR2Q9BXF3 1484 aa13.11□□□□□ -0.31
CBWD3-214ENST00000618921 DNAJC5Q9H3Z4 198 aa13.1□□□□□ -0.31
CBWD3-214ENST00000618921 CC2D2AQ9P2K1 1620 aa13.08□□□□□ -0.32
CBWD3-214ENST00000618921 SHROOM4Q9ULL8 1493 aa12.98□□□□□ -0.33
CBWD3-214ENST00000618921 EIF4G1Q04637 1599 aaKnown RBP12.96□□□□□ -0.34
CBWD3-214ENST00000618921 SCRIBQ14160 1630 aa12.88□□□□□ -0.35
CBWD3-214ENST00000618921 DCAF1Q9Y4B6 1507 aa12.86□□□□□ -0.35
CBWD3-214ENST00000618921 ZCCHC6Q5VYS8 1495 aaKnown RBP12.86□□□□□ -0.35
CBWD3-214ENST00000618921 KCNA4P22459 653 aa12.83□□□□□ -0.36
CBWD3-214ENST00000618921 CSRNP3Q8WYN3 585 aa12.66□□□□□ -0.38
CBWD3-214ENST00000618921 CUX2O14529 1486 aa12.61□□□□□ -0.39
CBWD3-214ENST00000618921 ERCC6Q03468 1493 aa12.55□□□□□ -0.4
CBWD3-214ENST00000618921 NCAPD3P42695 1498 aa12.47□□□□□ -0.41
CBWD3-214ENST00000618921 SENP3Q9H4L4 574 aaPredicted RBP12.44□□□□□ -0.42
CBWD3-214ENST00000618921 NESP48681 1621 aa12.4□□□□□ -0.42
CBWD3-214ENST00000618921 ADRA2BP18089 450 aa12.39□□□□□ -0.43
CBWD3-214ENST00000618921 SLC4A1APQ9BWU0 796 aaKnown RBP12.39□□□□□ -0.43
CBWD3-214ENST00000618921 RTN4Q9NQC3 1192 aaKnown RBP12.39□□□□□ -0.43
CBWD3-214ENST00000618921 ATAD2BQ9ULI0 1458 aa12.38□□□□□ -0.43
CBWD3-214ENST00000618921 TRIM41Q8WV44 630 aa12.38□□□□□ -0.43
CBWD3-214ENST00000618921 AMER1Q5JTC6 1135 aaPredicted RBP12.3□□□□□ -0.44
CBWD3-214ENST00000618921 SMARCA2P51531 1590 aa12.28□□□□□ -0.44
CBWD3-214ENST00000618921 HMGXB3Q12766 1538 aa12.28□□□□□ -0.44
CBWD3-214ENST00000618921 THOC2Q8NI27 1593 aaKnown RBP12.25□□□□□ -0.45
CBWD3-214ENST00000618921 SMARCA4P51532 1647 aa12.25□□□□□ -0.45
CBWD3-214ENST00000618921 BAZ1BQ9UIG0 1483 aaKnown RBP12.22□□□□□ -0.45
CBWD3-214ENST00000618921 LAMC3Q9Y6N6 1575 aa12.19□□□□□ -0.46
CBWD3-214ENST00000618921 PDS5BQ9NTI5 1447 aa12.17□□□□□ -0.46
CBWD3-214ENST00000618921 KIF21AQ7Z4S6 1674 aa12.17□□□□□ -0.46
CBWD3-214ENST00000618921 BAZ1AQ9NRL2 1556 aaPredicted RBP12.14□□□□□ -0.47
CBWD3-214ENST00000618921 PEG3Q9GZU2 1588 aa12.12□□□□□ -0.47
CBWD3-214ENST00000618921 CADPSQ9ULU8 1353 aa12.09□□□□□ -0.47
CBWD3-214ENST00000618921 OSCARQ8IYS5 282 aa12.09□□□□□ -0.47
CBWD3-214ENST00000618921 MROH2BQ7Z745 1585 aa12.07□□□□□ -0.48
CBWD3-214ENST00000618921 MRC2Q9UBG0 1479 aa12.06□□□□□ -0.48
CBWD3-214ENST00000618921 WDR62O43379 1518 aa12.02□□□□□ -0.48
CBWD3-214ENST00000618921 DAXXQ9UER7 740 aaPredicted RBP11.96□□□□□ -0.49
CBWD3-214ENST00000618921 CEP164Q9UPV0 1460 aa11.95□□□□□ -0.5
CBWD3-214ENST00000618921 PPP6R1Q9UPN7 881 aa11.94□□□□□ -0.5
CBWD3-214ENST00000618921 FANCD2Q9BXW9 1451 aa11.93□□□□□ -0.5
CBWD3-214ENST00000618921 NCBP3Q53F19 620 aaKnown RBP11.93□□□□□ -0.5
CBWD3-214ENST00000618921 WIZO95785 1651 aa11.9□□□□□ -0.51
CBWD3-214ENST00000618921 RIMBP3CA6NJZ7 1639 aa11.88□□□□□ -0.51
CBWD3-214ENST00000618921 RIMBP3BA6NNM3 1639 aa11.88□□□□□ -0.51
CBWD3-214ENST00000618921 RIMBP3Q9UFD9 1639 aa11.88□□□□□ -0.51
CBWD3-214ENST00000618921 CFTRP13569 1480 aa11.86□□□□□ -0.51
CBWD3-214ENST00000618921 URB2Q14146 1524 aaKnown RBP11.85□□□□□ -0.51
CBWD3-214ENST00000618921 CYB5RLQ6IPT4 315 aa11.85□□□□□ -0.51
CBWD3-214ENST00000618921 ZBTB22O15209 634 aa11.83□□□□□ -0.52
CBWD3-214ENST00000618921 ARHGEF11O15085 1522 aa11.81□□□□□ -0.52
CBWD3-214ENST00000618921 TRHP20396 242 aaPredicted RBP11.81□□□□□ -0.52
CBWD3-214ENST00000618921 PPP4R3CPQ6ZMV5 832 aa11.79□□□□□ -0.52
CBWD3-214ENST00000618921 ZNF608Q9ULD9 1512 aaPredicted RBP11.79□□□□□ -0.52
CBWD3-214ENST00000618921 IFT140Q96RY7 1462 aa11.73□□□□□ -0.53
CBWD3-214ENST00000618921 SUPT5HO00267 1087 aaKnown RBP11.72□□□□□ -0.53
CBWD3-214ENST00000618921 RSF1Q96T23 1441 aaPredicted RBP11.71□□□□□ -0.53
CBWD3-214ENST00000618921 FBLN2P98095 1184 aa11.69□□□□□ -0.54
CBWD3-214ENST00000618921 TOP2AP11388 1531 aaKnown RBP11.68□□□□□ -0.54
CBWD3-214ENST00000618921 ARAP1Q96P48 1450 aa11.67□□□□□ -0.54
CBWD3-214ENST00000618921 TOPBP1Q92547 1522 aa11.66□□□□□ -0.54
CBWD3-214ENST00000618921 AQRO60306 1485 aaKnown RBP eCLIP11.66□□□□□ -0.54
CBWD3-214ENST00000618921 NPM3O75607 178 aaKnown RBP11.64□□□□□ -0.55
CBWD3-214ENST00000618921 EIF4G3O43432 1585 aaKnown RBP11.63□□□□□ -0.55
CBWD3-214ENST00000618921 PRDM2Q13029 1718 aa11.63□□□□□ -0.55
CBWD3-214ENST00000618921 CHD1O14646 1710 aa11.62□□□□□ -0.55
CBWD3-214ENST00000618921 CCDC88BA6NC98 1476 aa11.62□□□□□ -0.55
CBWD3-214ENST00000618921 ABCC8Q09428 1581 aa11.6□□□□□ -0.55
CBWD3-214ENST00000618921 TARBP1Q13395 1621 aaKnown RBP11.57□□□□□ -0.56
CBWD3-214ENST00000618921 DNMBPQ6XZF7 1577 aa11.55□□□□□ -0.56
CBWD3-214ENST00000618921 TDRD9Q8NDG6 1382 aaKnown RBP11.55□□□□□ -0.56
CBWD3-214ENST00000618921 PELP1Q8IZL8 1130 aaKnown RBP11.53□□□□□ -0.56
CBWD3-214ENST00000618921 CHMP7Q8WUX9 453 aaPredicted RBP11.53□□□□□ -0.56
CBWD3-214ENST00000618921 POLA1P09884 1462 aaPredicted RBP11.52□□□□□ -0.56
CBWD3-214ENST00000618921 RAD54L2Q9Y4B4 1467 aa11.52□□□□□ -0.56
CBWD3-214ENST00000618921 SOGA1O94964 1423 aa11.5□□□□□ -0.57
CBWD3-214ENST00000618921 PRKCSHP14314 528 aaPredicted RBP11.48□□□□□ -0.57
CBWD3-214ENST00000618921 CLASP1Q7Z460 1538 aa11.48□□□□□ -0.57
CBWD3-214ENST00000618921 SNAPC4Q5SXM2 1469 aa11.47□□□□□ -0.57
CBWD3-214ENST00000618921 FOXD1Q16676 465 aa11.45□□□□□ -0.58
CBWD3-214ENST00000618921 MYT1Q01538 1121 aa11.45□□□□□ -0.58
CBWD3-214ENST00000618921 SYNJ1O43426 1573 aa11.44□□□□□ -0.58
CBWD3-214ENST00000618921 FOXD4L1Q9NU39 408 aa11.43□□□□□ -0.58
CBWD3-214ENST00000618921 GAPVD1Q14C86 1478 aa11.42□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 7.9 ms