RNA–Protein interactions for RNA: ENST00000618804.4

FAM13C-217, Transcript of family with sequence similarity 13 member C, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene FAM13C, Length 3,333 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FAM13C-217ENST00000618804 NISCHQ9Y2I1 1504 aa18.55■□□□□ 0.56
FAM13C-217ENST00000618804 DCAF8L2P0C7V8 631 aa16.53■□□□□ 0.24
FAM13C-217ENST00000618804 SHROOM4Q9ULL8 1493 aa16.41■□□□□ 0.22
FAM13C-217ENST00000618804 SUPT5HO00267 1087 aaKnown RBP16.02■□□□□ 0.15
FAM13C-217ENST00000618804 CCDC180Q9P1Z9 1646 aa15.55■□□□□ 0.08
FAM13C-217ENST00000618804 ZCCHC6Q5VYS8 1495 aaKnown RBP15.54■□□□□ 0.08
FAM13C-217ENST00000618804 ABCC9O60706 1549 aa15.43■□□□□ 0.06
FAM13C-217ENST00000618804 EHMT2Q96KQ7 1210 aa15.12■□□□□ 0.01
FAM13C-217ENST00000618804 SCRIBQ14160 1630 aa15.09■□□□□ 0.01
FAM13C-217ENST00000618804 CHIC1Q5VXU3 224 aa15.03■□□□□ -0
FAM13C-217ENST00000618804 PABPN1Q86U42 306 aaKnown RBP eCLIP14.95□□□□□ -0.02
FAM13C-217ENST00000618804 FAM9AQ8IZU1 332 aaPredicted RBP14.95□□□□□ -0.02
FAM13C-217ENST00000618804 LOC105371045A0A1W2PR82 267 aa14.87□□□□□ -0.03
FAM13C-217ENST00000618804 DCAF1Q9Y4B6 1507 aa14.86□□□□□ -0.03
FAM13C-217ENST00000618804 MYO15BQ96JP2 1530 aa14.78□□□□□ -0.04
FAM13C-217ENST00000618804 CECR2Q9BXF3 1484 aa14.74□□□□□ -0.05
FAM13C-217ENST00000618804 TRIM41Q8WV44 630 aa14.73□□□□□ -0.05
FAM13C-217ENST00000618804 RSF1Q96T23 1441 aaPredicted RBP14.71□□□□□ -0.05
FAM13C-217ENST00000618804 NACADO15069 1562 aa14.64□□□□□ -0.07
FAM13C-217ENST00000618804 PCGF6Q9BYE7 350 aa14.61□□□□□ -0.07
FAM13C-217ENST00000618804 RB1CC1Q8TDY2 1594 aa14.56□□□□□ -0.08
FAM13C-217ENST00000618804 MROH2BQ7Z745 1585 aa14.54□□□□□ -0.08
FAM13C-217ENST00000618804 PPARGC1BQ86YN6 1023 aaKnown RBP14.51□□□□□ -0.09
FAM13C-217ENST00000618804 TTBK1Q5TCY1 1321 aaPredicted RBP14.48□□□□□ -0.09
FAM13C-217ENST00000618804 WIZO95785 1651 aa14.43□□□□□ -0.1
FAM13C-217ENST00000618804 RANGAP1P46060 587 aaPredicted RBP14.38□□□□□ -0.11
FAM13C-217ENST00000618804 BAZ1AQ9NRL2 1556 aaPredicted RBP14.25□□□□□ -0.13
FAM13C-217ENST00000618804 UBTFP17480 764 aaKnown RBP14.21□□□□□ -0.13
FAM13C-217ENST00000618804 UNC13AQ9UPW8 1703 aa14.17□□□□□ -0.14
FAM13C-217ENST00000618804 CCDC88BA6NC98 1476 aa14.17□□□□□ -0.14
FAM13C-217ENST00000618804 ABCC8Q09428 1581 aa14.17□□□□□ -0.14
FAM13C-217ENST00000618804 SMARCA4P51532 1647 aa14.14□□□□□ -0.15
FAM13C-217ENST00000618804 BICRAQ9NZM4 1560 aa14.11□□□□□ -0.15
FAM13C-217ENST00000618804 TRIM26Q12899 539 aaPredicted RBP14.08□□□□□ -0.16
FAM13C-217ENST00000618804 HRCP23327 699 aa14.06□□□□□ -0.16
FAM13C-217ENST00000618804 TOP2AP11388 1531 aaKnown RBP14.04□□□□□ -0.16
FAM13C-217ENST00000618804 SOGA1O94964 1423 aa14.03□□□□□ -0.16
FAM13C-217ENST00000618804 BAZ1BQ9UIG0 1483 aaKnown RBP14.02□□□□□ -0.17
FAM13C-217ENST00000618804 SMARCA2P51531 1590 aa13.99□□□□□ -0.17
FAM13C-217ENST00000618804 CSRNP3Q8WYN3 585 aa13.98□□□□□ -0.17
FAM13C-217ENST00000618804 RUSC2Q8N2Y8 1516 aa13.98□□□□□ -0.17
FAM13C-217ENST00000618804 ATAD2BQ9ULI0 1458 aa13.97□□□□□ -0.17
FAM13C-217ENST00000618804 WRNQ14191 1432 aaPredicted RBP eCLIP13.91□□□□□ -0.18
FAM13C-217ENST00000618804 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP13.89□□□□□ -0.19
FAM13C-217ENST00000618804 APLP2Q06481 763 aa13.81□□□□□ -0.2
FAM13C-217ENST00000618804 CCER1Q8TC90 406 aaPredicted RBP13.81□□□□□ -0.2
FAM13C-217ENST00000618804 DNAJC5BQ9UF47 199 aa13.81□□□□□ -0.2
FAM13C-217ENST00000618804 ATP1B4Q9UN42 357 aaPredicted RBP13.81□□□□□ -0.2
FAM13C-217ENST00000618804 HNRNPUL2Q1KMD3 747 aaKnown RBP13.79□□□□□ -0.2
FAM13C-217ENST00000618804 EIF4G1Q04637 1599 aaKnown RBP13.79□□□□□ -0.2
FAM13C-217ENST00000618804 CEP162Q5TB80 1403 aa13.76□□□□□ -0.21
FAM13C-217ENST00000618804 P3H3Q8IVL6 736 aa13.74□□□□□ -0.21
FAM13C-217ENST00000618804 SYNJ1O43426 1573 aa13.71□□□□□ -0.21
FAM13C-217ENST00000618804 ITGAEP38570 1179 aa13.7□□□□□ -0.22
FAM13C-217ENST00000618804 NCAPD3P42695 1498 aa13.64□□□□□ -0.23
FAM13C-217ENST00000618804 TNIKQ9UKE5 1360 aa13.64□□□□□ -0.23
FAM13C-217ENST00000618804 GOLGA3Q08378 1498 aa13.63□□□□□ -0.23
FAM13C-217ENST00000618804 RAPGEF2Q9Y4G8 1499 aa13.63□□□□□ -0.23
FAM13C-217ENST00000618804 PEG3Q9GZU2 1588 aa13.62□□□□□ -0.23
FAM13C-217ENST00000618804 CLIP1P30622 1438 aa13.61□□□□□ -0.23
FAM13C-217ENST00000618804 NESP48681 1621 aa13.58□□□□□ -0.24
FAM13C-217ENST00000618804 CC2D2AQ9P2K1 1620 aa13.58□□□□□ -0.24
FAM13C-217ENST00000618804 EEA1Q15075 1411 aa13.56□□□□□ -0.24
FAM13C-217ENST00000618804 CADPSQ9ULU8 1353 aa13.55□□□□□ -0.24
FAM13C-217ENST00000618804 CEP164Q9UPV0 1460 aa13.55□□□□□ -0.24
FAM13C-217ENST00000618804 ARID3CA6NKF2 412 aa13.54□□□□□ -0.24
FAM13C-217ENST00000618804 CUX2O14529 1486 aa13.53□□□□□ -0.24
FAM13C-217ENST00000618804 ZEB1P37275 1124 aaPredicted RBP13.52□□□□□ -0.24
FAM13C-217ENST00000618804 CUX1P39880 1505 aa13.51□□□□□ -0.25
FAM13C-217ENST00000618804 KIF27Q86VH2 1401 aa13.5□□□□□ -0.25
FAM13C-217ENST00000618804 CFTRP13569 1480 aa13.49□□□□□ -0.25
FAM13C-217ENST00000618804 KANK4Q5T7N3 995 aaPredicted RBP13.49□□□□□ -0.25
FAM13C-217ENST00000618804 HMGXB3Q12766 1538 aa13.47□□□□□ -0.25
FAM13C-217ENST00000618804 RAD54L2Q9Y4B4 1467 aa13.46□□□□□ -0.26
FAM13C-217ENST00000618804 TDRD9Q8NDG6 1382 aaKnown RBP13.45□□□□□ -0.26
FAM13C-217ENST00000618804 FANCD2Q9BXW9 1451 aa13.44□□□□□ -0.26
FAM13C-217ENST00000618804 TOP2BQ02880 1626 aa13.42□□□□□ -0.26
FAM13C-217ENST00000618804 FBLN2P98095 1184 aa13.42□□□□□ -0.26
FAM13C-217ENST00000618804 FGD5Q6ZNL6 1462 aa13.41□□□□□ -0.26
FAM13C-217ENST00000618804 FAM50AQ14320 339 aaKnown RBP13.41□□□□□ -0.26
FAM13C-217ENST00000618804 CARMIL1Q5VZK9 1371 aa13.41□□□□□ -0.26
FAM13C-217ENST00000618804 IGF1RP08069 1367 aa13.38□□□□□ -0.27
FAM13C-217ENST00000618804 VPS8Q8N3P4 1428 aa13.37□□□□□ -0.27
FAM13C-217ENST00000618804 KIF21BO75037 1637 aa13.32□□□□□ -0.28
FAM13C-217ENST00000618804 ARAP1Q96P48 1450 aa13.3□□□□□ -0.28
FAM13C-217ENST00000618804 PRXQ9BXM0 1461 aa13.3□□□□□ -0.28
FAM13C-217ENST00000618804 YTHDC1Q96MU7 727 aaKnown RBP13.28□□□□□ -0.28
FAM13C-217ENST00000618804 BIVM-ERCC5R4GMW8 1640 aa13.26□□□□□ -0.29
FAM13C-217ENST00000618804 FHOD3Q2V2M9 1422 aa13.26□□□□□ -0.29
FAM13C-217ENST00000618804 POLA1P09884 1462 aaPredicted RBP13.25□□□□□ -0.29
FAM13C-217ENST00000618804 DIEXFQ68CQ4 756 aaKnown RBP13.24□□□□□ -0.29
FAM13C-217ENST00000618804 TOPBP1Q92547 1522 aa13.24□□□□□ -0.29
FAM13C-217ENST00000618804 NEUROD1Q13562 356 aa13.24□□□□□ -0.29
FAM13C-217ENST00000618804 PDS5BQ9NTI5 1447 aa13.22□□□□□ -0.29
FAM13C-217ENST00000618804 ARHGAP35Q9NRY4 1499 aa13.22□□□□□ -0.29
FAM13C-217ENST00000618804 AQRO60306 1485 aaKnown RBP eCLIP13.21□□□□□ -0.3
FAM13C-217ENST00000618804 URB2Q14146 1524 aaKnown RBP13.19□□□□□ -0.3
FAM13C-217ENST00000618804 CHIC2Q9UKJ5 165 aa13.18□□□□□ -0.3
FAM13C-217ENST00000618804 ERCC6Q03468 1493 aa13.17□□□□□ -0.3
FAM13C-217ENST00000618804 ERICH3Q5RHP9 1530 aa13.14□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 50.3 ms