RNA–Protein interactions for RNA: ENST00000617967.4

ATG9B-211, Transcript of autophagy related 9B, humanhuman

TSL 1 (best)

Gene ATG9B, Length 2,777 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG9B-211ENST00000617967 NISCHQ9Y2I1 1504 aa27.84■■■□□ 2.05
ATG9B-211ENST00000617967 SHROOM4Q9ULL8 1493 aa24.5■■□□□ 1.51
ATG9B-211ENST00000617967 DCAF8L2P0C7V8 631 aa24.23■■□□□ 1.47
ATG9B-211ENST00000617967 SUPT5HO00267 1087 aaKnown RBP23.91■■□□□ 1.42
ATG9B-211ENST00000617967 ZCCHC6Q5VYS8 1495 aaKnown RBP23.42■■□□□ 1.34
ATG9B-211ENST00000617967 CCDC180Q9P1Z9 1646 aa23.34■■□□□ 1.33
ATG9B-211ENST00000617967 CHIC1Q5VXU3 224 aa22.74■■□□□ 1.23
ATG9B-211ENST00000617967 ABCC9O60706 1549 aa22.71■■□□□ 1.23
ATG9B-211ENST00000617967 MYO15BQ96JP2 1530 aa22.62■■□□□ 1.21
ATG9B-211ENST00000617967 SCRIBQ14160 1630 aa22.53■■□□□ 1.2
ATG9B-211ENST00000617967 LOC105371045A0A1W2PR82 267 aa22.44■■□□□ 1.18
ATG9B-211ENST00000617967 EHMT2Q96KQ7 1210 aa22.44■■□□□ 1.18
ATG9B-211ENST00000617967 DCAF1Q9Y4B6 1507 aa22.4■■□□□ 1.18
ATG9B-211ENST00000617967 FAM9AQ8IZU1 332 aaPredicted RBP22.26■■□□□ 1.15
ATG9B-211ENST00000617967 PCGF6Q9BYE7 350 aa22.15■■□□□ 1.14
ATG9B-211ENST00000617967 RSF1Q96T23 1441 aaPredicted RBP22.13■■□□□ 1.13
ATG9B-211ENST00000617967 CECR2Q9BXF3 1484 aa22.09■■□□□ 1.13
ATG9B-211ENST00000617967 TRIM41Q8WV44 630 aa21.99■■□□□ 1.11
ATG9B-211ENST00000617967 PABPN1Q86U42 306 aaKnown RBP eCLIP21.97■■□□□ 1.11
ATG9B-211ENST00000617967 RB1CC1Q8TDY2 1594 aa21.91■■□□□ 1.1
ATG9B-211ENST00000617967 MROH2BQ7Z745 1585 aa21.84■■□□□ 1.09
ATG9B-211ENST00000617967 NACADO15069 1562 aa21.8■■□□□ 1.08
ATG9B-211ENST00000617967 PPARGC1BQ86YN6 1023 aaKnown RBP21.76■■□□□ 1.07
ATG9B-211ENST00000617967 WIZO95785 1651 aa21.71■■□□□ 1.07
ATG9B-211ENST00000617967 PELP1Q8IZL8 1130 aaKnown RBP21.62■■□□□ 1.05
ATG9B-211ENST00000617967 HRCP23327 699 aa21.59■■□□□ 1.05
ATG9B-211ENST00000617967 TTBK1Q5TCY1 1321 aaPredicted RBP21.56■■□□□ 1.04
ATG9B-211ENST00000617967 TRIM26Q12899 539 aaPredicted RBP21.35■■□□□ 1.01
ATG9B-211ENST00000617967 ABCC8Q09428 1581 aa21.33■■□□□ 1
ATG9B-211ENST00000617967 BAZ1AQ9NRL2 1556 aaPredicted RBP21.32■■□□□ 1
ATG9B-211ENST00000617967 UNC13AQ9UPW8 1703 aa21.31■■□□□ 1
ATG9B-211ENST00000617967 CCDC88BA6NC98 1476 aa21.26■□□□□ 0.99
ATG9B-211ENST00000617967 RANGAP1P46060 587 aaPredicted RBP21.25■□□□□ 0.99
ATG9B-211ENST00000617967 SMARCA4P51532 1647 aa21.21■□□□□ 0.99
ATG9B-211ENST00000617967 MYT1Q01538 1121 aa21.13■□□□□ 0.97
ATG9B-211ENST00000617967 BICRAQ9NZM4 1560 aa21.13■□□□□ 0.97
ATG9B-211ENST00000617967 SOGA1O94964 1423 aa21.12■□□□□ 0.97
ATG9B-211ENST00000617967 UBTFP17480 764 aaKnown RBP21.11■□□□□ 0.97
ATG9B-211ENST00000617967 TOP2AP11388 1531 aaKnown RBP21.09■□□□□ 0.97
ATG9B-211ENST00000617967 RUSC2Q8N2Y8 1516 aa21.08■□□□□ 0.96
ATG9B-211ENST00000617967 SMARCA2P51531 1590 aa21.07■□□□□ 0.96
ATG9B-211ENST00000617967 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP20.98■□□□□ 0.95
ATG9B-211ENST00000617967 EIF4G1Q04637 1599 aaKnown RBP20.94■□□□□ 0.94
ATG9B-211ENST00000617967 CSRNP3Q8WYN3 585 aa20.91■□□□□ 0.94
ATG9B-211ENST00000617967 ATAD2BQ9ULI0 1458 aa20.84■□□□□ 0.93
ATG9B-211ENST00000617967 BAZ1BQ9UIG0 1483 aaKnown RBP20.83■□□□□ 0.92
ATG9B-211ENST00000617967 WRNQ14191 1432 aaPredicted RBP eCLIP20.81■□□□□ 0.92
ATG9B-211ENST00000617967 CEP162Q5TB80 1403 aa20.77■□□□□ 0.92
ATG9B-211ENST00000617967 CCER1Q8TC90 406 aaPredicted RBP20.76■□□□□ 0.91
ATG9B-211ENST00000617967 SYNJ1O43426 1573 aa20.68■□□□□ 0.9
ATG9B-211ENST00000617967 HNRNPUL2Q1KMD3 747 aaKnown RBP20.64■□□□□ 0.9
ATG9B-211ENST00000617967 TNIKQ9UKE5 1360 aa20.57■□□□□ 0.88
ATG9B-211ENST00000617967 PEG3Q9GZU2 1588 aa20.52■□□□□ 0.88
ATG9B-211ENST00000617967 ZEB1P37275 1124 aaPredicted RBP20.52■□□□□ 0.88
ATG9B-211ENST00000617967 RAPGEF2Q9Y4G8 1499 aa20.52■□□□□ 0.88
ATG9B-211ENST00000617967 GOLGA3Q08378 1498 aa20.5■□□□□ 0.87
ATG9B-211ENST00000617967 CLIP1P30622 1438 aa20.44■□□□□ 0.86
ATG9B-211ENST00000617967 APLP2Q06481 763 aa20.43■□□□□ 0.86
ATG9B-211ENST00000617967 SCAF1Q9H7N4 1312 aaKnown RBP20.43■□□□□ 0.86
ATG9B-211ENST00000617967 DNAJC5BQ9UF47 199 aa20.4■□□□□ 0.86
ATG9B-211ENST00000617967 EEA1Q15075 1411 aa20.39■□□□□ 0.85
ATG9B-211ENST00000617967 CEP164Q9UPV0 1460 aa20.37■□□□□ 0.85
ATG9B-211ENST00000617967 ITGAEP38570 1179 aa20.34■□□□□ 0.85
ATG9B-211ENST00000617967 P3H3Q8IVL6 736 aa20.34■□□□□ 0.85
ATG9B-211ENST00000617967 NCAPD3P42695 1498 aa20.32■□□□□ 0.84
ATG9B-211ENST00000617967 ATP1B4Q9UN42 357 aaPredicted RBP20.31■□□□□ 0.84
ATG9B-211ENST00000617967 KANK4Q5T7N3 995 aaPredicted RBP20.29■□□□□ 0.84
ATG9B-211ENST00000617967 CUX1P39880 1505 aa20.28■□□□□ 0.84
ATG9B-211ENST00000617967 TOP2BQ02880 1626 aa20.22■□□□□ 0.83
ATG9B-211ENST00000617967 VPS8Q8N3P4 1428 aa20.17■□□□□ 0.82
ATG9B-211ENST00000617967 CFTRP13569 1480 aa20.16■□□□□ 0.82
ATG9B-211ENST00000617967 NESP48681 1621 aa20.15■□□□□ 0.82
ATG9B-211ENST00000617967 KIF21BO75037 1637 aa20.15■□□□□ 0.82
ATG9B-211ENST00000617967 CUX2O14529 1486 aa20.14■□□□□ 0.82
ATG9B-211ENST00000617967 HMGXB3Q12766 1538 aa20.14■□□□□ 0.81
ATG9B-211ENST00000617967 KIF27Q86VH2 1401 aa20.13■□□□□ 0.81
ATG9B-211ENST00000617967 DIEXFQ68CQ4 756 aaKnown RBP20.12■□□□□ 0.81
ATG9B-211ENST00000617967 CC2D2AQ9P2K1 1620 aa20.12■□□□□ 0.81
ATG9B-211ENST00000617967 CADPSQ9ULU8 1353 aa20.11■□□□□ 0.81
ATG9B-211ENST00000617967 ARAP1Q96P48 1450 aa20.08■□□□□ 0.8
ATG9B-211ENST00000617967 YTHDC1Q96MU7 727 aaKnown RBP20.06■□□□□ 0.8
ATG9B-211ENST00000617967 PRXQ9BXM0 1461 aa20.06■□□□□ 0.8
ATG9B-211ENST00000617967 RAD54L2Q9Y4B4 1467 aa20.04■□□□□ 0.8
ATG9B-211ENST00000617967 IGF1RP08069 1367 aa20.03■□□□□ 0.8
ATG9B-211ENST00000617967 BIVM-ERCC5R4GMW8 1640 aa20.03■□□□□ 0.8
ATG9B-211ENST00000617967 FGD5Q6ZNL6 1462 aa20.01■□□□□ 0.79
ATG9B-211ENST00000617967 CARMIL1Q5VZK9 1371 aa19.97■□□□□ 0.79
ATG9B-211ENST00000617967 FANCD2Q9BXW9 1451 aa19.96■□□□□ 0.79
ATG9B-211ENST00000617967 ARID3CA6NKF2 412 aa19.95■□□□□ 0.78
ATG9B-211ENST00000617967 FAM50AQ14320 339 aaKnown RBP19.92■□□□□ 0.78
ATG9B-211ENST00000617967 TDRD9Q8NDG6 1382 aaKnown RBP19.92■□□□□ 0.78
ATG9B-211ENST00000617967 ARHGAP35Q9NRY4 1499 aa19.92■□□□□ 0.78
ATG9B-211ENST00000617967 ZNF316A6NFI3 1004 aaPredicted RBP19.9■□□□□ 0.78
ATG9B-211ENST00000617967 NEUROD1Q13562 356 aa19.9■□□□□ 0.78
ATG9B-211ENST00000617967 ERICH3Q5RHP9 1530 aa19.84■□□□□ 0.77
ATG9B-211ENST00000617967 ACIN1Q9UKV3 1341 aaKnown RBP19.82■□□□□ 0.76
ATG9B-211ENST00000617967 MIER1Q8N108 512 aa19.82■□□□□ 0.76
ATG9B-211ENST00000617967 FHOD3Q2V2M9 1422 aa19.81■□□□□ 0.76
ATG9B-211ENST00000617967 POLA1P09884 1462 aaPredicted RBP19.77■□□□□ 0.76
ATG9B-211ENST00000617967 TOPBP1Q92547 1522 aa19.74■□□□□ 0.75
Retrieved 100 of 20,778 RNA–protein pairs in 40.7 ms