RNA–Protein interactions for RNA: ENST00000617848.4

CNTNAP3B-213, Transcript of contactin associated protein like 3B, humanhuman

TSL 3

Gene CNTNAP3B, Length 290 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNTNAP3B-213ENST00000617848 AEBP2Q6ZN18 517 aaPredicted RBP21.36■■□□□ 1.01
CNTNAP3B-213ENST00000617848 CHIC1Q5VXU3 224 aa20.55■□□□□ 0.88
CNTNAP3B-213ENST00000617848 NISCHQ9Y2I1 1504 aa19.71■□□□□ 0.75
CNTNAP3B-213ENST00000617848 SENP3Q9H4L4 574 aaPredicted RBP18.34■□□□□ 0.53
CNTNAP3B-213ENST00000617848 PHF23Q9BUL5 403 aaPredicted RBP18.05■□□□□ 0.48
CNTNAP3B-213ENST00000617848 CCDC180Q9P1Z9 1646 aa17.14■□□□□ 0.33
CNTNAP3B-213ENST00000617848 FOXD1Q16676 465 aa16.98■□□□□ 0.31
CNTNAP3B-213ENST00000617848 PLPPR3Q6T4P5 718 aa16.55■□□□□ 0.24
CNTNAP3B-213ENST00000617848 ZCCHC6Q5VYS8 1495 aaKnown RBP16.53■□□□□ 0.24
CNTNAP3B-213ENST00000617848 DCAF8L2P0C7V8 631 aa16.35■□□□□ 0.21
CNTNAP3B-213ENST00000617848 DCAF1Q9Y4B6 1507 aa16.3■□□□□ 0.2
CNTNAP3B-213ENST00000617848 ABCC9O60706 1549 aa16.27■□□□□ 0.2
CNTNAP3B-213ENST00000617848 MYO15BQ96JP2 1530 aa16.13■□□□□ 0.17
CNTNAP3B-213ENST00000617848 SHROOM4Q9ULL8 1493 aa16.06■□□□□ 0.16
CNTNAP3B-213ENST00000617848 NACADO15069 1562 aa16.03■□□□□ 0.16
CNTNAP3B-213ENST00000617848 PIAS4Q8N2W9 510 aaPredicted RBP15.98■□□□□ 0.15
CNTNAP3B-213ENST00000617848 ADRA2BP18089 450 aa15.96■□□□□ 0.15
CNTNAP3B-213ENST00000617848 PPP6R1Q9UPN7 881 aa15.95■□□□□ 0.14
CNTNAP3B-213ENST00000617848 MSH5O43196 834 aa15.93■□□□□ 0.14
CNTNAP3B-213ENST00000617848 RB1CC1Q8TDY2 1594 aa15.87■□□□□ 0.13
CNTNAP3B-213ENST00000617848 SCRIBQ14160 1630 aa15.76■□□□□ 0.11
CNTNAP3B-213ENST00000617848 SUPT5HO00267 1087 aaKnown RBP15.49■□□□□ 0.07
CNTNAP3B-213ENST00000617848 UNC13AQ9UPW8 1703 aa15.45■□□□□ 0.06
CNTNAP3B-213ENST00000617848 PABPN1Q86U42 306 aaKnown RBP eCLIP15.39■□□□□ 0.05
CNTNAP3B-213ENST00000617848 BICRAQ9NZM4 1560 aa15.36■□□□□ 0.05
CNTNAP3B-213ENST00000617848 CECR2Q9BXF3 1484 aa15.31■□□□□ 0.04
CNTNAP3B-213ENST00000617848 RSF1Q96T23 1441 aaPredicted RBP15.3■□□□□ 0.04
CNTNAP3B-213ENST00000617848 BAZ1AQ9NRL2 1556 aaPredicted RBP15.21■□□□□ 0.03
CNTNAP3B-213ENST00000617848 MROH2BQ7Z745 1585 aa15.2■□□□□ 0.02
CNTNAP3B-213ENST00000617848 POTEDQ86YR6 584 aa15.14■□□□□ 0.01
CNTNAP3B-213ENST00000617848 SMARCA4P51532 1647 aa15.12■□□□□ 0.01
CNTNAP3B-213ENST00000617848 WIZO95785 1651 aa15.05■□□□□ -0
CNTNAP3B-213ENST00000617848 PEG3Q9GZU2 1588 aa14.95□□□□□ -0.02
CNTNAP3B-213ENST00000617848 TOP2AP11388 1531 aaKnown RBP14.93□□□□□ -0.02
CNTNAP3B-213ENST00000617848 ATAD2BQ9ULI0 1458 aa14.93□□□□□ -0.02
CNTNAP3B-213ENST00000617848 EIF4G1Q04637 1599 aaKnown RBP14.91□□□□□ -0.02
CNTNAP3B-213ENST00000617848 SMARCA2P51531 1590 aa14.9□□□□□ -0.02
CNTNAP3B-213ENST00000617848 BAZ1BQ9UIG0 1483 aaKnown RBP14.82□□□□□ -0.04
CNTNAP3B-213ENST00000617848 NCAPD3P42695 1498 aa14.82□□□□□ -0.04
CNTNAP3B-213ENST00000617848 CCDC88BA6NC98 1476 aa14.81□□□□□ -0.04
CNTNAP3B-213ENST00000617848 SCAF1Q9H7N4 1312 aaKnown RBP14.75□□□□□ -0.05
CNTNAP3B-213ENST00000617848 HMGXB3Q12766 1538 aa14.75□□□□□ -0.05
CNTNAP3B-213ENST00000617848 CC2D2AQ9P2K1 1620 aa14.7□□□□□ -0.06
CNTNAP3B-213ENST00000617848 TRIM41Q8WV44 630 aa14.6□□□□□ -0.07
CNTNAP3B-213ENST00000617848 MAPK8IP2Q13387 824 aaPredicted RBP14.56□□□□□ -0.08
CNTNAP3B-213ENST00000617848 DMRT2Q9Y5R5 561 aa14.54□□□□□ -0.08
CNTNAP3B-213ENST00000617848 PPP4R3CPQ6ZMV5 832 aa14.49□□□□□ -0.09
CNTNAP3B-213ENST00000617848 CFTRP13569 1480 aa14.46□□□□□ -0.09
CNTNAP3B-213ENST00000617848 CADPSQ9ULU8 1353 aa14.45□□□□□ -0.1
CNTNAP3B-213ENST00000617848 ABCC8Q09428 1581 aa14.43□□□□□ -0.1
CNTNAP3B-213ENST00000617848 DNAJC5BQ9UF47 199 aa14.4□□□□□ -0.1
CNTNAP3B-213ENST00000617848 WRNQ14191 1432 aaPredicted RBP eCLIP14.4□□□□□ -0.1
CNTNAP3B-213ENST00000617848 FAM9AQ8IZU1 332 aaPredicted RBP14.3□□□□□ -0.12
CNTNAP3B-213ENST00000617848 PRDM2Q13029 1718 aa14.29□□□□□ -0.12
CNTNAP3B-213ENST00000617848 SYNJ1O43426 1573 aa14.28□□□□□ -0.12
CNTNAP3B-213ENST00000617848 LAMC3Q9Y6N6 1575 aa14.27□□□□□ -0.12
CNTNAP3B-213ENST00000617848 LOC105371045A0A1W2PR82 267 aa14.26□□□□□ -0.13
CNTNAP3B-213ENST00000617848 NESP48681 1621 aa14.26□□□□□ -0.13
CNTNAP3B-213ENST00000617848 FANCD2Q9BXW9 1451 aa14.25□□□□□ -0.13
CNTNAP3B-213ENST00000617848 TOP2BQ02880 1626 aa14.24□□□□□ -0.13
CNTNAP3B-213ENST00000617848 CNKSR2Q8WXI2 1034 aa14.22□□□□□ -0.13
CNTNAP3B-213ENST00000617848 EEA1Q15075 1411 aa14.22□□□□□ -0.13
CNTNAP3B-213ENST00000617848 PDS5BQ9NTI5 1447 aa14.22□□□□□ -0.13
CNTNAP3B-213ENST00000617848 CUX1P39880 1505 aa14.21□□□□□ -0.13
CNTNAP3B-213ENST00000617848 BIVM-ERCC5R4GMW8 1640 aa14.21□□□□□ -0.13
CNTNAP3B-213ENST00000617848 SOGA1O94964 1423 aa14.21□□□□□ -0.13
CNTNAP3B-213ENST00000617848 CSRNP3Q8WYN3 585 aa14.18□□□□□ -0.14
CNTNAP3B-213ENST00000617848 CEP164Q9UPV0 1460 aa14.16□□□□□ -0.14
CNTNAP3B-213ENST00000617848 RUSC2Q8N2Y8 1516 aa14.14□□□□□ -0.15
CNTNAP3B-213ENST00000617848 DNMBPQ6XZF7 1577 aa14.1□□□□□ -0.15
CNTNAP3B-213ENST00000617848 TOPBP1Q92547 1522 aa14.09□□□□□ -0.15
CNTNAP3B-213ENST00000617848 FGD5Q6ZNL6 1462 aa14.08□□□□□ -0.16
CNTNAP3B-213ENST00000617848 NCBP3Q53F19 620 aaKnown RBP14.08□□□□□ -0.16
CNTNAP3B-213ENST00000617848 EHMT2Q96KQ7 1210 aa14.07□□□□□ -0.16
CNTNAP3B-213ENST00000617848 KIF27Q86VH2 1401 aa14.06□□□□□ -0.16
CNTNAP3B-213ENST00000617848 URB2Q14146 1524 aaKnown RBP14.05□□□□□ -0.16
CNTNAP3B-213ENST00000617848 HOXD11P31277 338 aaPredicted RBP14.05□□□□□ -0.16
CNTNAP3B-213ENST00000617848 KIF21AQ7Z4S6 1674 aa14.04□□□□□ -0.16
CNTNAP3B-213ENST00000617848 RNF216Q9NWF9 866 aaPredicted RBP14.03□□□□□ -0.16
CNTNAP3B-213ENST00000617848 POLA1P09884 1462 aaPredicted RBP14.01□□□□□ -0.17
CNTNAP3B-213ENST00000617848 CUX2O14529 1486 aa14□□□□□ -0.17
CNTNAP3B-213ENST00000617848 MRC2Q9UBG0 1479 aa14□□□□□ -0.17
CNTNAP3B-213ENST00000617848 GOLGA3Q08378 1498 aa13.99□□□□□ -0.17
CNTNAP3B-213ENST00000617848 TNIKQ9UKE5 1360 aa13.98□□□□□ -0.17
CNTNAP3B-213ENST00000617848 UBTFP17480 764 aaKnown RBP13.98□□□□□ -0.17
CNTNAP3B-213ENST00000617848 RAD54L2Q9Y4B4 1467 aa13.98□□□□□ -0.17
CNTNAP3B-213ENST00000617848 ABCA10Q8WWZ4 1543 aa13.97□□□□□ -0.17
CNTNAP3B-213ENST00000617848 KIF21BO75037 1637 aa13.97□□□□□ -0.17
CNTNAP3B-213ENST00000617848 ERCC6Q03468 1493 aa13.96□□□□□ -0.17
CNTNAP3B-213ENST00000617848 DCAF8L1A6NGE4 600 aa13.96□□□□□ -0.17
CNTNAP3B-213ENST00000617848 IGF1RP08069 1367 aa13.96□□□□□ -0.18
CNTNAP3B-213ENST00000617848 PRXQ9BXM0 1461 aa13.94□□□□□ -0.18
CNTNAP3B-213ENST00000617848 RAPGEF2Q9Y4G8 1499 aa13.9□□□□□ -0.18
CNTNAP3B-213ENST00000617848 WDR62O43379 1518 aa13.9□□□□□ -0.19
CNTNAP3B-213ENST00000617848 ERICH3Q5RHP9 1530 aa13.89□□□□□ -0.19
CNTNAP3B-213ENST00000617848 CARMIL1Q5VZK9 1371 aa13.88□□□□□ -0.19
CNTNAP3B-213ENST00000617848 TDRD9Q8NDG6 1382 aaKnown RBP13.87□□□□□ -0.19
CNTNAP3B-213ENST00000617848 CEP162Q5TB80 1403 aa13.85□□□□□ -0.19
CNTNAP3B-213ENST00000617848 IFT140Q96RY7 1462 aa13.85□□□□□ -0.19
CNTNAP3B-213ENST00000617848 WDR97A6NE52 1622 aa13.84□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 31 ms