RNA–Protein interactions for RNA: ENST00000615597.1

TMEM106C-222, Transcript of transmembrane protein 106C, humanhuman

TSL 2

Gene TMEM106C, Length 685 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM106C-222ENST00000615597 AEBP2Q6ZN18 517 aaPredicted RBP19.64■□□□□ 0.73
TMEM106C-222ENST00000615597 CHIC1Q5VXU3 224 aa18.7■□□□□ 0.58
TMEM106C-222ENST00000615597 NISCHQ9Y2I1 1504 aa18.66■□□□□ 0.58
TMEM106C-222ENST00000615597 ABCC9O60706 1549 aa17.12■□□□□ 0.33
TMEM106C-222ENST00000615597 DNAJC5BQ9UF47 199 aa17.04■□□□□ 0.32
TMEM106C-222ENST00000615597 SENP3Q9H4L4 574 aaPredicted RBP16.9■□□□□ 0.3
TMEM106C-222ENST00000615597 CCDC180Q9P1Z9 1646 aa16.67■□□□□ 0.26
TMEM106C-222ENST00000615597 PHF23Q9BUL5 403 aaPredicted RBP16.6■□□□□ 0.25
TMEM106C-222ENST00000615597 DNAJC5Q9H3Z4 198 aa16.32■□□□□ 0.2
TMEM106C-222ENST00000615597 PABPN1Q86U42 306 aaKnown RBP eCLIP15.81■□□□□ 0.12
TMEM106C-222ENST00000615597 RB1CC1Q8TDY2 1594 aa15.74■□□□□ 0.11
TMEM106C-222ENST00000615597 NACADO15069 1562 aa15.73■□□□□ 0.11
TMEM106C-222ENST00000615597 MYO15BQ96JP2 1530 aa15.67■□□□□ 0.1
TMEM106C-222ENST00000615597 FOXD1Q16676 465 aa15.65■□□□□ 0.1
TMEM106C-222ENST00000615597 DCAF1Q9Y4B6 1507 aa15.52■□□□□ 0.07
TMEM106C-222ENST00000615597 ZCCHC6Q5VYS8 1495 aaKnown RBP15.52■□□□□ 0.07
TMEM106C-222ENST00000615597 DCAF8L2P0C7V8 631 aa15.49■□□□□ 0.07
TMEM106C-222ENST00000615597 CECR2Q9BXF3 1484 aa15.46■□□□□ 0.07
TMEM106C-222ENST00000615597 UNC13AQ9UPW8 1703 aa15.41■□□□□ 0.06
TMEM106C-222ENST00000615597 CC2D2AQ9P2K1 1620 aa15.35■□□□□ 0.05
TMEM106C-222ENST00000615597 TRIM41Q8WV44 630 aa15.34■□□□□ 0.05
TMEM106C-222ENST00000615597 BICRAQ9NZM4 1560 aa15.32■□□□□ 0.04
TMEM106C-222ENST00000615597 SHROOM4Q9ULL8 1493 aa15.2■□□□□ 0.02
TMEM106C-222ENST00000615597 SCRIBQ14160 1630 aa15.08■□□□□ 0
TMEM106C-222ENST00000615597 CUX2O14529 1486 aa15.03■□□□□ -0
TMEM106C-222ENST00000615597 EIF4G1Q04637 1599 aaKnown RBP15.02□□□□□ -0.01
TMEM106C-222ENST00000615597 PLPPR3Q6T4P5 718 aa14.99□□□□□ -0.01
TMEM106C-222ENST00000615597 ERCC6Q03468 1493 aa14.82□□□□□ -0.04
TMEM106C-222ENST00000615597 MSH5O43196 834 aa14.77□□□□□ -0.05
TMEM106C-222ENST00000615597 PIAS4Q8N2W9 510 aaPredicted RBP14.69□□□□□ -0.06
TMEM106C-222ENST00000615597 PPP6R1Q9UPN7 881 aa14.56□□□□□ -0.08
TMEM106C-222ENST00000615597 ADRA2BP18089 450 aa14.55□□□□□ -0.08
TMEM106C-222ENST00000615597 NCAPD3P42695 1498 aa14.54□□□□□ -0.08
TMEM106C-222ENST00000615597 SMARCA4P51532 1647 aa14.48□□□□□ -0.09
TMEM106C-222ENST00000615597 ATAD2BQ9ULI0 1458 aa14.48□□□□□ -0.09
TMEM106C-222ENST00000615597 BAZ1AQ9NRL2 1556 aaPredicted RBP14.47□□□□□ -0.09
TMEM106C-222ENST00000615597 SMARCA2P51531 1590 aa14.45□□□□□ -0.1
TMEM106C-222ENST00000615597 PEG3Q9GZU2 1588 aa14.43□□□□□ -0.1
TMEM106C-222ENST00000615597 HMGXB3Q12766 1538 aa14.42□□□□□ -0.1
TMEM106C-222ENST00000615597 NESP48681 1621 aa14.41□□□□□ -0.1
TMEM106C-222ENST00000615597 THOC2Q8NI27 1593 aaKnown RBP14.4□□□□□ -0.1
TMEM106C-222ENST00000615597 POTEDQ86YR6 584 aa14.37□□□□□ -0.11
TMEM106C-222ENST00000615597 MROH2BQ7Z745 1585 aa14.34□□□□□ -0.11
TMEM106C-222ENST00000615597 BAZ1BQ9UIG0 1483 aaKnown RBP14.31□□□□□ -0.12
TMEM106C-222ENST00000615597 TRHP20396 242 aaPredicted RBP14.3□□□□□ -0.12
TMEM106C-222ENST00000615597 ILDR1Q86SU0 546 aaPredicted RBP14.27□□□□□ -0.13
TMEM106C-222ENST00000615597 RIMBP3CA6NJZ7 1639 aa14.23□□□□□ -0.13
TMEM106C-222ENST00000615597 RIMBP3BA6NNM3 1639 aa14.23□□□□□ -0.13
TMEM106C-222ENST00000615597 RIMBP3Q9UFD9 1639 aa14.23□□□□□ -0.13
TMEM106C-222ENST00000615597 OSCARQ8IYS5 282 aa14.21□□□□□ -0.13
TMEM106C-222ENST00000615597 KIF21AQ7Z4S6 1674 aa14.16□□□□□ -0.14
TMEM106C-222ENST00000615597 RSF1Q96T23 1441 aaPredicted RBP14.15□□□□□ -0.14
TMEM106C-222ENST00000615597 WIZO95785 1651 aa14.15□□□□□ -0.14
TMEM106C-222ENST00000615597 LAMC3Q9Y6N6 1575 aa14.14□□□□□ -0.15
TMEM106C-222ENST00000615597 CADPSQ9ULU8 1353 aa14.08□□□□□ -0.16
TMEM106C-222ENST00000615597 CYB5RLQ6IPT4 315 aa14.07□□□□□ -0.16
TMEM106C-222ENST00000615597 PDS5BQ9NTI5 1447 aa14.04□□□□□ -0.16
TMEM106C-222ENST00000615597 ARHGEF11O15085 1522 aa14.04□□□□□ -0.16
TMEM106C-222ENST00000615597 TOP2AP11388 1531 aaKnown RBP14.03□□□□□ -0.16
TMEM106C-222ENST00000615597 CFTRP13569 1480 aa13.97□□□□□ -0.17
TMEM106C-222ENST00000615597 MRC2Q9UBG0 1479 aa13.93□□□□□ -0.18
TMEM106C-222ENST00000615597 WDR62O43379 1518 aa13.9□□□□□ -0.18
TMEM106C-222ENST00000615597 CCDC88BA6NC98 1476 aa13.87□□□□□ -0.19
TMEM106C-222ENST00000615597 FANCD2Q9BXW9 1451 aa13.87□□□□□ -0.19
TMEM106C-222ENST00000615597 CEP164Q9UPV0 1460 aa13.86□□□□□ -0.19
TMEM106C-222ENST00000615597 ARAP1Q96P48 1450 aa13.84□□□□□ -0.19
TMEM106C-222ENST00000615597 PRDM2Q13029 1718 aa13.79□□□□□ -0.2
TMEM106C-222ENST00000615597 URB2Q14146 1524 aaKnown RBP13.74□□□□□ -0.21
TMEM106C-222ENST00000615597 ABCC8Q09428 1581 aa13.68□□□□□ -0.22
TMEM106C-222ENST00000615597 TOPBP1Q92547 1522 aa13.64□□□□□ -0.23
TMEM106C-222ENST00000615597 DNMBPQ6XZF7 1577 aa13.61□□□□□ -0.23
TMEM106C-222ENST00000615597 IFT140Q96RY7 1462 aa13.61□□□□□ -0.23
TMEM106C-222ENST00000615597 ZNF608Q9ULD9 1512 aaPredicted RBP13.59□□□□□ -0.23
TMEM106C-222ENST00000615597 CHD1O14646 1710 aa13.56□□□□□ -0.24
TMEM106C-222ENST00000615597 KDM4FA0A1W2PPD8 638 aa13.54□□□□□ -0.24
TMEM106C-222ENST00000615597 SUPT5HO00267 1087 aaKnown RBP13.53□□□□□ -0.24
TMEM106C-222ENST00000615597 TARBP1Q13395 1621 aaKnown RBP13.51□□□□□ -0.25
TMEM106C-222ENST00000615597 POLA1P09884 1462 aaPredicted RBP13.51□□□□□ -0.25
TMEM106C-222ENST00000615597 FBLN2P98095 1184 aa13.51□□□□□ -0.25
TMEM106C-222ENST00000615597 SCAF1Q9H7N4 1312 aaKnown RBP13.46□□□□□ -0.25
TMEM106C-222ENST00000615597 CUX1P39880 1505 aa13.46□□□□□ -0.25
TMEM106C-222ENST00000615597 WDR97A6NE52 1622 aa13.46□□□□□ -0.26
TMEM106C-222ENST00000615597 LMTK3Q96Q04 1460 aa13.45□□□□□ -0.26
TMEM106C-222ENST00000615597 EIF4G3O43432 1585 aaKnown RBP13.45□□□□□ -0.26
TMEM106C-222ENST00000615597 SOGA1O94964 1423 aa13.44□□□□□ -0.26
TMEM106C-222ENST00000615597 FGD5Q6ZNL6 1462 aa13.43□□□□□ -0.26
TMEM106C-222ENST00000615597 AQRO60306 1485 aaKnown RBP eCLIP13.42□□□□□ -0.26
TMEM106C-222ENST00000615597 RAD54L2Q9Y4B4 1467 aa13.42□□□□□ -0.26
TMEM106C-222ENST00000615597 FBXO41Q8TF61 875 aa13.39□□□□□ -0.27
TMEM106C-222ENST00000615597 TDRD9Q8NDG6 1382 aaKnown RBP13.36□□□□□ -0.27
TMEM106C-222ENST00000615597 DMRT2Q9Y5R5 561 aa13.36□□□□□ -0.27
TMEM106C-222ENST00000615597 ABCA10Q8WWZ4 1543 aa13.35□□□□□ -0.27
TMEM106C-222ENST00000615597 ERCC6L2Q5T890 1561 aa13.35□□□□□ -0.27
TMEM106C-222ENST00000615597 HECW2Q9P2P5 1572 aa13.34□□□□□ -0.27
TMEM106C-222ENST00000615597 MAPK8IP2Q13387 824 aaPredicted RBP13.34□□□□□ -0.27
TMEM106C-222ENST00000615597 ILDR2Q71H61 639 aa13.34□□□□□ -0.27
TMEM106C-222ENST00000615597 SOCS7O14512 581 aa13.33□□□□□ -0.28
TMEM106C-222ENST00000615597 TOP2BQ02880 1626 aa13.32□□□□□ -0.28
TMEM106C-222ENST00000615597 BIVM-ERCC5R4GMW8 1640 aa13.32□□□□□ -0.28
TMEM106C-222ENST00000615597 WRNQ14191 1432 aaPredicted RBP eCLIP13.32□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 99 ms