RNA–Protein interactions for RNA: ENST00000613173.4

CCL4L2-211, Transcript of C-C motif chemokine ligand 4 like 2, humanhuman

TSL 1 (best) BASIC

Gene CCL4L2, Length 741 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCL4L2-211ENST00000613173 AEBP2Q6ZN18 517 aaPredicted RBP27.69■■■□□ 2.02
CCL4L2-211ENST00000613173 CHIC1Q5VXU3 224 aa25.77■■□□□ 1.72
CCL4L2-211ENST00000613173 SENP3Q9H4L4 574 aaPredicted RBP23.62■■□□□ 1.37
CCL4L2-211ENST00000613173 PHF23Q9BUL5 403 aaPredicted RBP23.29■■□□□ 1.32
CCL4L2-211ENST00000613173 NISCHQ9Y2I1 1504 aa22.69■■□□□ 1.22
CCL4L2-211ENST00000613173 FOXD1Q16676 465 aa22.15■■□□□ 1.14
CCL4L2-211ENST00000613173 POTEDQ86YR6 584 aa21.45■■□□□ 1.02
CCL4L2-211ENST00000613173 MSH5O43196 834 aa20.87■□□□□ 0.93
CCL4L2-211ENST00000613173 PIAS4Q8N2W9 510 aaPredicted RBP20.55■□□□□ 0.88
CCL4L2-211ENST00000613173 CCDC180Q9P1Z9 1646 aa20.35■□□□□ 0.85
CCL4L2-211ENST00000613173 PPP6R1Q9UPN7 881 aa20.31■□□□□ 0.84
CCL4L2-211ENST00000613173 ADRA2BP18089 450 aa20.21■□□□□ 0.83
CCL4L2-211ENST00000613173 PLPPR3Q6T4P5 718 aa20.21■□□□□ 0.83
CCL4L2-211ENST00000613173 ABCC9O60706 1549 aa20.18■□□□□ 0.82
CCL4L2-211ENST00000613173 RB1CC1Q8TDY2 1594 aa19.3■□□□□ 0.68
CCL4L2-211ENST00000613173 NACADO15069 1562 aa19.2■□□□□ 0.66
CCL4L2-211ENST00000613173 MYO15BQ96JP2 1530 aa19.02■□□□□ 0.64
CCL4L2-211ENST00000613173 DCAF8L2P0C7V8 631 aa18.96■□□□□ 0.63
CCL4L2-211ENST00000613173 ZCCHC6Q5VYS8 1495 aaKnown RBP18.85■□□□□ 0.61
CCL4L2-211ENST00000613173 DNAJC5BQ9UF47 199 aa18.82■□□□□ 0.6
CCL4L2-211ENST00000613173 UNC13AQ9UPW8 1703 aa18.81■□□□□ 0.6
CCL4L2-211ENST00000613173 DCAF1Q9Y4B6 1507 aa18.8■□□□□ 0.6
CCL4L2-211ENST00000613173 MAPK8IP2Q13387 824 aaPredicted RBP18.76■□□□□ 0.59
CCL4L2-211ENST00000613173 PABPN1Q86U42 306 aaKnown RBP eCLIP18.76■□□□□ 0.59
CCL4L2-211ENST00000613173 BICRAQ9NZM4 1560 aa18.73■□□□□ 0.59
CCL4L2-211ENST00000613173 DMRT2Q9Y5R5 561 aa18.65■□□□□ 0.58
CCL4L2-211ENST00000613173 SHROOM4Q9ULL8 1493 aa18.58■□□□□ 0.57
CCL4L2-211ENST00000613173 SCRIBQ14160 1630 aa18.49■□□□□ 0.55
CCL4L2-211ENST00000613173 SCAF1Q9H7N4 1312 aaKnown RBP18.37■□□□□ 0.53
CCL4L2-211ENST00000613173 CACNB1Q02641 598 aaPredicted RBP18.33■□□□□ 0.52
CCL4L2-211ENST00000613173 EIF4G1Q04637 1599 aaKnown RBP18.26■□□□□ 0.51
CCL4L2-211ENST00000613173 CC2D2AQ9P2K1 1620 aa18.26■□□□□ 0.51
CCL4L2-211ENST00000613173 CECR2Q9BXF3 1484 aa18.2■□□□□ 0.5
CCL4L2-211ENST00000613173 DCAF8L1A6NGE4 600 aa18■□□□□ 0.47
CCL4L2-211ENST00000613173 RNF39Q9H2S5 420 aa17.79■□□□□ 0.44
CCL4L2-211ENST00000613173 NCAPD3P42695 1498 aa17.73■□□□□ 0.43
CCL4L2-211ENST00000613173 HOXD11P31277 338 aaPredicted RBP17.72■□□□□ 0.43
CCL4L2-211ENST00000613173 PPP4R3CPQ6ZMV5 832 aa17.69■□□□□ 0.42
CCL4L2-211ENST00000613173 SMARCA4P51532 1647 aa17.68■□□□□ 0.42
CCL4L2-211ENST00000613173 ATAD2BQ9ULI0 1458 aa17.67■□□□□ 0.42
CCL4L2-211ENST00000613173 SMARCA2P51531 1590 aa17.65■□□□□ 0.42
CCL4L2-211ENST00000613173 HMGXB3Q12766 1538 aa17.63■□□□□ 0.41
CCL4L2-211ENST00000613173 BAZ1AQ9NRL2 1556 aaPredicted RBP17.62■□□□□ 0.41
CCL4L2-211ENST00000613173 PEG3Q9GZU2 1588 aa17.55■□□□□ 0.4
CCL4L2-211ENST00000613173 BAZ1BQ9UIG0 1483 aaKnown RBP17.5■□□□□ 0.39
CCL4L2-211ENST00000613173 C1QBPQ07021 282 aaKnown RBP17.47■□□□□ 0.39
CCL4L2-211ENST00000613173 MROH2BQ7Z745 1585 aa17.46■□□□□ 0.39
CCL4L2-211ENST00000613173 CNKSR2Q8WXI2 1034 aa17.45■□□□□ 0.38
CCL4L2-211ENST00000613173 RNF216Q9NWF9 866 aaPredicted RBP17.43■□□□□ 0.38
CCL4L2-211ENST00000613173 ERCC6Q03468 1493 aa17.43■□□□□ 0.38
CCL4L2-211ENST00000613173 CUX2O14529 1486 aa17.42■□□□□ 0.38
CCL4L2-211ENST00000613173 NESP48681 1621 aa17.36■□□□□ 0.37
CCL4L2-211ENST00000613173 LAMC3Q9Y6N6 1575 aa17.31■□□□□ 0.36
CCL4L2-211ENST00000613173 DNAJC5Q9H3Z4 198 aa17.24■□□□□ 0.35
CCL4L2-211ENST00000613173 THOC2Q8NI27 1593 aaKnown RBP17.23■□□□□ 0.35
CCL4L2-211ENST00000613173 WIZO95785 1651 aa17.23■□□□□ 0.35
CCL4L2-211ENST00000613173 PDS5BQ9NTI5 1447 aa17.2■□□□□ 0.34
CCL4L2-211ENST00000613173 CADPSQ9ULU8 1353 aa17.16■□□□□ 0.34
CCL4L2-211ENST00000613173 KIF21AQ7Z4S6 1674 aa17.15■□□□□ 0.34
CCL4L2-211ENST00000613173 RSF1Q96T23 1441 aaPredicted RBP17.14■□□□□ 0.33
CCL4L2-211ENST00000613173 TOP2AP11388 1531 aaKnown RBP17.08■□□□□ 0.32
CCL4L2-211ENST00000613173 MRC2Q9UBG0 1479 aa17.05■□□□□ 0.32
CCL4L2-211ENST00000613173 WDR62O43379 1518 aa17.02■□□□□ 0.32
CCL4L2-211ENST00000613173 CFTRP13569 1480 aa17.01■□□□□ 0.31
CCL4L2-211ENST00000613173 CEP164Q9UPV0 1460 aa16.99■□□□□ 0.31
CCL4L2-211ENST00000613173 FANCD2Q9BXW9 1451 aa16.98■□□□□ 0.31
CCL4L2-211ENST00000613173 GRWD1Q9BQ67 446 aaKnown RBP eCLIP16.93■□□□□ 0.3
CCL4L2-211ENST00000613173 CCDC88BA6NC98 1476 aa16.85■□□□□ 0.29
CCL4L2-211ENST00000613173 URB2Q14146 1524 aaKnown RBP16.84■□□□□ 0.29
CCL4L2-211ENST00000613173 PRDM2Q13029 1718 aa16.82■□□□□ 0.28
CCL4L2-211ENST00000613173 NCBP3Q53F19 620 aaKnown RBP16.77■□□□□ 0.28
CCL4L2-211ENST00000613173 POTEHQ6S545 545 aa16.68■□□□□ 0.26
CCL4L2-211ENST00000613173 TOPBP1Q92547 1522 aa16.66■□□□□ 0.26
CCL4L2-211ENST00000613173 IFT140Q96RY7 1462 aa16.66■□□□□ 0.26
CCL4L2-211ENST00000613173 ABCC8Q09428 1581 aa16.65■□□□□ 0.26
CCL4L2-211ENST00000613173 DNMBPQ6XZF7 1577 aa16.63■□□□□ 0.25
CCL4L2-211ENST00000613173 ZNF608Q9ULD9 1512 aaPredicted RBP16.6■□□□□ 0.25
CCL4L2-211ENST00000613173 NPM3O75607 178 aaKnown RBP16.59■□□□□ 0.25
CCL4L2-211ENST00000613173 OSCARQ8IYS5 282 aa16.56■□□□□ 0.24
CCL4L2-211ENST00000613173 EIF4G3O43432 1585 aaKnown RBP16.54■□□□□ 0.24
CCL4L2-211ENST00000613173 TARBP1Q13395 1621 aaKnown RBP16.52■□□□□ 0.24
CCL4L2-211ENST00000613173 POLA1P09884 1462 aaPredicted RBP16.51■□□□□ 0.23
CCL4L2-211ENST00000613173 U3KPZ7 1027 aaPredicted RBP16.51■□□□□ 0.23
CCL4L2-211ENST00000613173 DSG3P32926 999 aa16.49■□□□□ 0.23
CCL4L2-211ENST00000613173 SPINK5Q9NQ38 1064 aaPredicted RBP16.49■□□□□ 0.23
CCL4L2-211ENST00000613173 CAPN15O75808 1086 aa16.47■□□□□ 0.23
CCL4L2-211ENST00000613173 TRIM41Q8WV44 630 aa16.46■□□□□ 0.23
CCL4L2-211ENST00000613173 AQRO60306 1485 aaKnown RBP eCLIP16.44■□□□□ 0.22
CCL4L2-211ENST00000613173 CUX1P39880 1505 aa16.41■□□□□ 0.22
CCL4L2-211ENST00000613173 FGD5Q6ZNL6 1462 aa16.41■□□□□ 0.22
CCL4L2-211ENST00000613173 RAD54L2Q9Y4B4 1467 aa16.41■□□□□ 0.22
CCL4L2-211ENST00000613173 WDR97A6NE52 1622 aa16.41■□□□□ 0.22
CCL4L2-211ENST00000613173 SOGA1O94964 1423 aa16.4■□□□□ 0.22
CCL4L2-211ENST00000613173 RIMBP3CA6NJZ7 1639 aa16.37■□□□□ 0.21
CCL4L2-211ENST00000613173 RIMBP3BA6NNM3 1639 aa16.37■□□□□ 0.21
CCL4L2-211ENST00000613173 RIMBP3Q9UFD9 1639 aa16.37■□□□□ 0.21
CCL4L2-211ENST00000613173 SUPT5HO00267 1087 aaKnown RBP16.35■□□□□ 0.21
CCL4L2-211ENST00000613173 CHD1O14646 1710 aa16.35■□□□□ 0.21
CCL4L2-211ENST00000613173 TDRD9Q8NDG6 1382 aaKnown RBP16.35■□□□□ 0.21
CCL4L2-211ENST00000613173 ARHGEF11O15085 1522 aa16.35■□□□□ 0.21
Retrieved 100 of 20,778 RNA–protein pairs in 94 ms