RNA–Protein interactions for RNA: ENST00000613013.1

UBXN8-206, Transcript of UBX domain protein 8, humanhuman

TSL 2

Gene UBXN8, Length 528 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBXN8-206ENST00000613013 AEBP2Q6ZN18 517 aaPredicted RBP26.49■■□□□ 1.83
UBXN8-206ENST00000613013 CHIC1Q5VXU3 224 aa25.67■■□□□ 1.7
UBXN8-206ENST00000613013 PHF23Q9BUL5 403 aaPredicted RBP22.58■■□□□ 1.21
UBXN8-206ENST00000613013 SENP3Q9H4L4 574 aaPredicted RBP22.47■■□□□ 1.19
UBXN8-206ENST00000613013 NISCHQ9Y2I1 1504 aa21.57■■□□□ 1.04
UBXN8-206ENST00000613013 ABCC9O60706 1549 aa21.22■□□□□ 0.99
UBXN8-206ENST00000613013 DNAJC5BQ9UF47 199 aa21.07■□□□□ 0.96
UBXN8-206ENST00000613013 FOXD1Q16676 465 aa20.91■□□□□ 0.94
UBXN8-206ENST00000613013 PLPPR3Q6T4P5 718 aa20.74■□□□□ 0.91
UBXN8-206ENST00000613013 DNAJC5Q9H3Z4 198 aa20.21■□□□□ 0.83
UBXN8-206ENST00000613013 PPP6R1Q9UPN7 881 aa20■□□□□ 0.79
UBXN8-206ENST00000613013 ADRA2BP18089 450 aa19.96■□□□□ 0.79
UBXN8-206ENST00000613013 CCDC180Q9P1Z9 1646 aa19.76■□□□□ 0.75
UBXN8-206ENST00000613013 PABPN1Q86U42 306 aaKnown RBP eCLIP19.68■□□□□ 0.74
UBXN8-206ENST00000613013 PIAS4Q8N2W9 510 aaPredicted RBP19.65■□□□□ 0.74
UBXN8-206ENST00000613013 RB1CC1Q8TDY2 1594 aa19.51■□□□□ 0.71
UBXN8-206ENST00000613013 MSH5O43196 834 aa19.31■□□□□ 0.68
UBXN8-206ENST00000613013 CECR2Q9BXF3 1484 aa19.21■□□□□ 0.67
UBXN8-206ENST00000613013 DCAF8L2P0C7V8 631 aa19.11■□□□□ 0.65
UBXN8-206ENST00000613013 NACADO15069 1562 aa19.06■□□□□ 0.64
UBXN8-206ENST00000613013 CC2D2AQ9P2K1 1620 aa19■□□□□ 0.63
UBXN8-206ENST00000613013 UNC13AQ9UPW8 1703 aa19■□□□□ 0.63
UBXN8-206ENST00000613013 BICRAQ9NZM4 1560 aa18.98■□□□□ 0.63
UBXN8-206ENST00000613013 TRIM41Q8WV44 630 aa18.96■□□□□ 0.63
UBXN8-206ENST00000613013 CUX2O14529 1486 aa18.67■□□□□ 0.58
UBXN8-206ENST00000613013 EIF4G1Q04637 1599 aaKnown RBP18.63■□□□□ 0.57
UBXN8-206ENST00000613013 SHROOM4Q9ULL8 1493 aa18.47■□□□□ 0.55
UBXN8-206ENST00000613013 ERCC6Q03468 1493 aa18.41■□□□□ 0.54
UBXN8-206ENST00000613013 MYO15BQ96JP2 1530 aa18.29■□□□□ 0.52
UBXN8-206ENST00000613013 PPP4R3CPQ6ZMV5 832 aa18.28■□□□□ 0.52
UBXN8-206ENST00000613013 SCAF1Q9H7N4 1312 aaKnown RBP18.22■□□□□ 0.51
UBXN8-206ENST00000613013 MAPK8IP2Q13387 824 aaPredicted RBP18.17■□□□□ 0.5
UBXN8-206ENST00000613013 SCRIBQ14160 1630 aa18.14■□□□□ 0.49
UBXN8-206ENST00000613013 POTEDQ86YR6 584 aa17.94■□□□□ 0.46
UBXN8-206ENST00000613013 DMRT2Q9Y5R5 561 aa17.91■□□□□ 0.46
UBXN8-206ENST00000613013 NESP48681 1621 aa17.86■□□□□ 0.45
UBXN8-206ENST00000613013 OSCARQ8IYS5 282 aa17.79■□□□□ 0.44
UBXN8-206ENST00000613013 CNKSR2Q8WXI2 1034 aa17.79■□□□□ 0.44
UBXN8-206ENST00000613013 TRHP20396 242 aaPredicted RBP17.78■□□□□ 0.44
UBXN8-206ENST00000613013 THOC2Q8NI27 1593 aaKnown RBP17.78■□□□□ 0.44
UBXN8-206ENST00000613013 NCBP3Q53F19 620 aaKnown RBP17.72■□□□□ 0.43
UBXN8-206ENST00000613013 SMARCA2P51531 1590 aa17.68■□□□□ 0.42
UBXN8-206ENST00000613013 KCNA4P22459 653 aa17.66■□□□□ 0.42
UBXN8-206ENST00000613013 NCAPD3P42695 1498 aa17.64■□□□□ 0.41
UBXN8-206ENST00000613013 DCAF1Q9Y4B6 1507 aa17.62■□□□□ 0.41
UBXN8-206ENST00000613013 BAZ1AQ9NRL2 1556 aaPredicted RBP17.61■□□□□ 0.41
UBXN8-206ENST00000613013 ILDR1Q86SU0 546 aaPredicted RBP17.59■□□□□ 0.41
UBXN8-206ENST00000613013 ZCCHC6Q5VYS8 1495 aaKnown RBP17.56■□□□□ 0.4
UBXN8-206ENST00000613013 RIMBP3CA6NJZ7 1639 aa17.55■□□□□ 0.4
UBXN8-206ENST00000613013 RIMBP3BA6NNM3 1639 aa17.55■□□□□ 0.4
UBXN8-206ENST00000613013 RIMBP3Q9UFD9 1639 aa17.55■□□□□ 0.4
UBXN8-206ENST00000613013 CYB5RLQ6IPT4 315 aa17.52■□□□□ 0.4
UBXN8-206ENST00000613013 RNF216Q9NWF9 866 aaPredicted RBP17.49■□□□□ 0.39
UBXN8-206ENST00000613013 NPM3O75607 178 aaKnown RBP17.48■□□□□ 0.39
UBXN8-206ENST00000613013 HOXD11P31277 338 aaPredicted RBP17.48■□□□□ 0.39
UBXN8-206ENST00000613013 KIF21AQ7Z4S6 1674 aa17.48■□□□□ 0.39
UBXN8-206ENST00000613013 PDS5BQ9NTI5 1447 aa17.45■□□□□ 0.38
UBXN8-206ENST00000613013 ATAD2BQ9ULI0 1458 aa17.44■□□□□ 0.38
UBXN8-206ENST00000613013 LAMC3Q9Y6N6 1575 aa17.4■□□□□ 0.38
UBXN8-206ENST00000613013 ARHGEF11O15085 1522 aa17.37■□□□□ 0.37
UBXN8-206ENST00000613013 MRC2Q9UBG0 1479 aa17.33■□□□□ 0.37
UBXN8-206ENST00000613013 HMGXB3Q12766 1538 aa17.32■□□□□ 0.36
UBXN8-206ENST00000613013 WDR62O43379 1518 aa17.26■□□□□ 0.35
UBXN8-206ENST00000613013 BAZ1BQ9UIG0 1483 aaKnown RBP17.23■□□□□ 0.35
UBXN8-206ENST00000613013 DCAF8L1A6NGE4 600 aa17.15■□□□□ 0.34
UBXN8-206ENST00000613013 ARAP1Q96P48 1450 aa17.13■□□□□ 0.33
UBXN8-206ENST00000613013 CADPSQ9ULU8 1353 aa17.11■□□□□ 0.33
UBXN8-206ENST00000613013 SMARCA4P51532 1647 aa17.07■□□□□ 0.32
UBXN8-206ENST00000613013 CEP164Q9UPV0 1460 aa17.03■□□□□ 0.32
UBXN8-206ENST00000613013 FANCD2Q9BXW9 1451 aa16.92■□□□□ 0.3
UBXN8-206ENST00000613013 FBLN2P98095 1184 aa16.9■□□□□ 0.3
UBXN8-206ENST00000613013 ZNF608Q9ULD9 1512 aaPredicted RBP16.87■□□□□ 0.29
UBXN8-206ENST00000613013 RSF1Q96T23 1441 aaPredicted RBP16.84■□□□□ 0.29
UBXN8-206ENST00000613013 URB2Q14146 1524 aaKnown RBP16.84■□□□□ 0.29
UBXN8-206ENST00000613013 PEG3Q9GZU2 1588 aa16.82■□□□□ 0.28
UBXN8-206ENST00000613013 KDM4FA0A1W2PPD8 638 aa16.79■□□□□ 0.28
UBXN8-206ENST00000613013 SLC4A1APQ9BWU0 796 aaKnown RBP16.76■□□□□ 0.27
UBXN8-206ENST00000613013 CHD1O14646 1710 aa16.73■□□□□ 0.27
UBXN8-206ENST00000613013 IFT140Q96RY7 1462 aa16.72■□□□□ 0.27
UBXN8-206ENST00000613013 GRWD1Q9BQ67 446 aaKnown RBP eCLIP16.65■□□□□ 0.26
UBXN8-206ENST00000613013 MROH2BQ7Z745 1585 aa16.64■□□□□ 0.25
UBXN8-206ENST00000613013 FBXO41Q8TF61 875 aa16.63■□□□□ 0.25
UBXN8-206ENST00000613013 EIF4G3O43432 1585 aaKnown RBP16.62■□□□□ 0.25
UBXN8-206ENST00000613013 AQRO60306 1485 aaKnown RBP eCLIP16.61■□□□□ 0.25
UBXN8-206ENST00000613013 CFTRP13569 1480 aa16.6■□□□□ 0.25
UBXN8-206ENST00000613013 SLC4A2P04920 1241 aa16.58■□□□□ 0.24
UBXN8-206ENST00000613013 LMTK3Q96Q04 1460 aa16.58■□□□□ 0.24
UBXN8-206ENST00000613013 RNF39Q9H2S5 420 aa16.55■□□□□ 0.24
UBXN8-206ENST00000613013 GAPVD1Q14C86 1478 aa16.53■□□□□ 0.24
UBXN8-206ENST00000613013 SOCS7O14512 581 aa16.5■□□□□ 0.23
UBXN8-206ENST00000613013 CHMP7Q8WUX9 453 aaPredicted RBP16.5■□□□□ 0.23
UBXN8-206ENST00000613013 CLASP1Q7Z460 1538 aa16.49■□□□□ 0.23
UBXN8-206ENST00000613013 ERCC6L2Q5T890 1561 aa16.48■□□□□ 0.23
UBXN8-206ENST00000613013 ILDR2Q71H61 639 aa16.43■□□□□ 0.22
UBXN8-206ENST00000613013 TOPBP1Q92547 1522 aa16.43■□□□□ 0.22
UBXN8-206ENST00000613013 HECW2Q9P2P5 1572 aa16.43■□□□□ 0.22
UBXN8-206ENST00000613013 SYNJ1O43426 1573 aa16.41■□□□□ 0.22
UBXN8-206ENST00000613013 FAM69CQ0P6D2 419 aa16.39■□□□□ 0.21
UBXN8-206ENST00000613013 WIZO95785 1651 aa16.38■□□□□ 0.21
UBXN8-206ENST00000613013 U3KPZ7 1027 aaPredicted RBP16.37■□□□□ 0.21
Retrieved 100 of 20,778 RNA–protein pairs in 154.3 ms