RNA–Protein interactions for RNA: ENST00000612258.4

FGF1-214, Transcript of fibroblast growth factor 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene FGF1, Length 3,805 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FGF1-214ENST00000612258 NISCHQ9Y2I1 1504 aa11.87□□□□□ -0.51
FGF1-214ENST00000612258 CCDC180Q9P1Z9 1646 aa10.15□□□□□ -0.78
FGF1-214ENST00000612258 ZCCHC6Q5VYS8 1495 aaKnown RBP10.02□□□□□ -0.8
FGF1-214ENST00000612258 SHROOM4Q9ULL8 1493 aa10□□□□□ -0.81
FGF1-214ENST00000612258 DCAF8L2P0C7V8 631 aa9.9□□□□□ -0.83
FGF1-214ENST00000612258 DCAF1Q9Y4B6 1507 aa9.75□□□□□ -0.85
FGF1-214ENST00000612258 SUPT5HO00267 1087 aaKnown RBP9.72□□□□□ -0.85
FGF1-214ENST00000612258 MYO15BQ96JP2 1530 aa9.51□□□□□ -0.89
FGF1-214ENST00000612258 SCRIBQ14160 1630 aa9.49□□□□□ -0.89
FGF1-214ENST00000612258 ABCC9O60706 1549 aa9.48□□□□□ -0.89
FGF1-214ENST00000612258 PELP1Q8IZL8 1130 aaKnown RBP9.46□□□□□ -0.89
FGF1-214ENST00000612258 CHIC1Q5VXU3 224 aa9.43□□□□□ -0.9
FGF1-214ENST00000612258 NACADO15069 1562 aa9.4□□□□□ -0.9
FGF1-214ENST00000612258 PCGF6Q9BYE7 350 aa9.36□□□□□ -0.91
FGF1-214ENST00000612258 RSF1Q96T23 1441 aaPredicted RBP9.35□□□□□ -0.91
FGF1-214ENST00000612258 HRCP23327 699 aa9.28□□□□□ -0.92
FGF1-214ENST00000612258 CECR2Q9BXF3 1484 aa9.28□□□□□ -0.92
FGF1-214ENST00000612258 RB1CC1Q8TDY2 1594 aa9.26□□□□□ -0.93
FGF1-214ENST00000612258 MYT1Q01538 1121 aa9.24□□□□□ -0.93
FGF1-214ENST00000612258 MROH2BQ7Z745 1585 aa9.23□□□□□ -0.93
FGF1-214ENST00000612258 UNC13AQ9UPW8 1703 aa9.17□□□□□ -0.94
FGF1-214ENST00000612258 WIZO95785 1651 aa9.17□□□□□ -0.94
FGF1-214ENST00000612258 PPARGC1BQ86YN6 1023 aaKnown RBP9.15□□□□□ -0.95
FGF1-214ENST00000612258 LOC105371045A0A1W2PR82 267 aa9.14□□□□□ -0.95
FGF1-214ENST00000612258 BAZ1AQ9NRL2 1556 aaPredicted RBP9.11□□□□□ -0.95
FGF1-214ENST00000612258 SMARCA4P51532 1647 aa9.06□□□□□ -0.96
FGF1-214ENST00000612258 BICRAQ9NZM4 1560 aa9.06□□□□□ -0.96
FGF1-214ENST00000612258 TRIM41Q8WV44 630 aa9.06□□□□□ -0.96
FGF1-214ENST00000612258 PABPN1Q86U42 306 aaKnown RBP eCLIP9.04□□□□□ -0.96
FGF1-214ENST00000612258 EIF4G1Q04637 1599 aaKnown RBP9.03□□□□□ -0.96
FGF1-214ENST00000612258 TOP2AP11388 1531 aaKnown RBP9.02□□□□□ -0.97
FGF1-214ENST00000612258 CENPBP07199 599 aaPredicted RBP9.01□□□□□ -0.97
FGF1-214ENST00000612258 ZEB1P37275 1124 aaPredicted RBP9.01□□□□□ -0.97
FGF1-214ENST00000612258 FAM9AQ8IZU1 332 aaPredicted RBP8.98□□□□□ -0.97
FGF1-214ENST00000612258 CCDC88BA6NC98 1476 aa8.98□□□□□ -0.97
FGF1-214ENST00000612258 SMARCA2P51531 1590 aa8.98□□□□□ -0.97
FGF1-214ENST00000612258 EHMT2Q96KQ7 1210 aa8.95□□□□□ -0.98
FGF1-214ENST00000612258 ABCC8Q09428 1581 aa8.92□□□□□ -0.98
FGF1-214ENST00000612258 PEG3Q9GZU2 1588 aa8.91□□□□□ -0.98
FGF1-214ENST00000612258 TRIM26Q12899 539 aaPredicted RBP8.88□□□□□ -0.99
FGF1-214ENST00000612258 ATAD2BQ9ULI0 1458 aa8.86□□□□□ -0.99
FGF1-214ENST00000612258 YTHDC1Q96MU7 727 aaKnown RBP8.83□□□□□ -1
FGF1-214ENST00000612258 CCER1Q8TC90 406 aaPredicted RBP8.82□□□□□ -1
FGF1-214ENST00000612258 SOGA1O94964 1423 aa8.81□□□□□ -1
FGF1-214ENST00000612258 BAZ1BQ9UIG0 1483 aaKnown RBP8.81□□□□□ -1
FGF1-214ENST00000612258 RUSC2Q8N2Y8 1516 aa8.78□□□□□ -1
FGF1-214ENST00000612258 GTF3C3Q9Y5Q9 886 aa8.77□□□□□ -1
FGF1-214ENST00000612258 SCAF1Q9H7N4 1312 aaKnown RBP8.77□□□□□ -1.01
FGF1-214ENST00000612258 WRNQ14191 1432 aaPredicted RBP eCLIP8.76□□□□□ -1.01
FGF1-214ENST00000612258 SYNJ1O43426 1573 aa8.76□□□□□ -1.01
FGF1-214ENST00000612258 TTBK1Q5TCY1 1321 aaPredicted RBP8.73□□□□□ -1.01
FGF1-214ENST00000612258 CSRNP3Q8WYN3 585 aa8.71□□□□□ -1.02
FGF1-214ENST00000612258 ACIN1Q9UKV3 1341 aaKnown RBP8.71□□□□□ -1.02
FGF1-214ENST00000612258 NCAPD3P42695 1498 aa8.7□□□□□ -1.02
FGF1-214ENST00000612258 EEA1Q15075 1411 aa8.7□□□□□ -1.02
FGF1-214ENST00000612258 HMGXB3Q12766 1538 aa8.7□□□□□ -1.02
FGF1-214ENST00000612258 CEP162Q5TB80 1403 aa8.69□□□□□ -1.02
FGF1-214ENST00000612258 TNIKQ9UKE5 1360 aa8.68□□□□□ -1.02
FGF1-214ENST00000612258 DIEXFQ68CQ4 756 aaKnown RBP8.66□□□□□ -1.02
FGF1-214ENST00000612258 GOLGA3Q08378 1498 aa8.65□□□□□ -1.02
FGF1-214ENST00000612258 TOP2BQ02880 1626 aa8.65□□□□□ -1.02
FGF1-214ENST00000612258 ERICH6Q7L0X2 663 aa8.64□□□□□ -1.03
FGF1-214ENST00000612258 UBTFP17480 764 aaKnown RBP8.64□□□□□ -1.03
FGF1-214ENST00000612258 KIF21BO75037 1637 aa8.63□□□□□ -1.03
FGF1-214ENST00000612258 BIVM-ERCC5R4GMW8 1640 aa8.62□□□□□ -1.03
FGF1-214ENST00000612258 CEP164Q9UPV0 1460 aa8.61□□□□□ -1.03
FGF1-214ENST00000612258 NEUROD1Q13562 356 aa8.61□□□□□ -1.03
FGF1-214ENST00000612258 CFTRP13569 1480 aa8.61□□□□□ -1.03
FGF1-214ENST00000612258 CUX1P39880 1505 aa8.6□□□□□ -1.03
FGF1-214ENST00000612258 RAPGEF2Q9Y4G8 1499 aa8.6□□□□□ -1.03
FGF1-214ENST00000612258 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP8.6□□□□□ -1.03
FGF1-214ENST00000612258 CC2D2AQ9P2K1 1620 aa8.55□□□□□ -1.04
FGF1-214ENST00000612258 CLIP1P30622 1438 aa8.55□□□□□ -1.04
FGF1-214ENST00000612258 PRDM2Q13029 1718 aa8.53□□□□□ -1.04
FGF1-214ENST00000612258 PRXQ9BXM0 1461 aa8.53□□□□□ -1.04
FGF1-214ENST00000612258 CADPSQ9ULU8 1353 aa8.52□□□□□ -1.05
FGF1-214ENST00000612258 ERICH3Q5RHP9 1530 aa8.5□□□□□ -1.05
FGF1-214ENST00000612258 NEFLP07196 543 aa8.5□□□□□ -1.05
FGF1-214ENST00000612258 RANGAP1P46060 587 aaPredicted RBP8.5□□□□□ -1.05
FGF1-214ENST00000612258 VPS8Q8N3P4 1428 aa8.5□□□□□ -1.05
FGF1-214ENST00000612258 KIF27Q86VH2 1401 aa8.49□□□□□ -1.05
FGF1-214ENST00000612258 APLP2Q06481 763 aa8.48□□□□□ -1.05
FGF1-214ENST00000612258 ARAP1Q96P48 1450 aa8.46□□□□□ -1.06
FGF1-214ENST00000612258 FGD5Q6ZNL6 1462 aa8.45□□□□□ -1.06
FGF1-214ENST00000612258 CUX2O14529 1486 aa8.45□□□□□ -1.06
FGF1-214ENST00000612258 NESP48681 1621 aa8.44□□□□□ -1.06
FGF1-214ENST00000612258 FANCD2Q9BXW9 1451 aa8.44□□□□□ -1.06
FGF1-214ENST00000612258 IGF1RP08069 1367 aa8.44□□□□□ -1.06
FGF1-214ENST00000612258 DNAJC5BQ9UF47 199 aa8.41□□□□□ -1.06
FGF1-214ENST00000612258 ARHGAP35Q9NRY4 1499 aa8.4□□□□□ -1.06
FGF1-214ENST00000612258 ZNF316A6NFI3 1004 aaPredicted RBP8.39□□□□□ -1.07
FGF1-214ENST00000612258 BCANQ96GW7 911 aa8.39□□□□□ -1.07
FGF1-214ENST00000612258 RAD54L2Q9Y4B4 1467 aa8.38□□□□□ -1.07
FGF1-214ENST00000612258 DNMBPQ6XZF7 1577 aa8.38□□□□□ -1.07
FGF1-214ENST00000612258 HNRNPUL2Q1KMD3 747 aaKnown RBP8.38□□□□□ -1.07
FGF1-214ENST00000612258 TOPBP1Q92547 1522 aa8.38□□□□□ -1.07
FGF1-214ENST00000612258 KANK4Q5T7N3 995 aaPredicted RBP8.38□□□□□ -1.07
FGF1-214ENST00000612258 CARMIL1Q5VZK9 1371 aa8.37□□□□□ -1.07
FGF1-214ENST00000612258 POLA1P09884 1462 aaPredicted RBP8.37□□□□□ -1.07
FGF1-214ENST00000612258 BCL11AQ9H165 835 aa8.36□□□□□ -1.07
Retrieved 100 of 20,778 RNA–protein pairs in 96.5 ms